Array 1 2474-2838 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUBS01000109.1 Enterococcus faecalis strain CVM N52467 N52467_S2_L001_R1_001_contig_109, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2474 36 100.0 30 .................................... TTTTAAAATCTACCTGAGTCCCTGCAGTTT 2540 36 100.0 30 .................................... GAGTCCACATCGTTATATACTTGCCCGACA 2606 36 100.0 30 .................................... GTACCTCTATGGAATCTGGGCGAATCATTT 2672 36 100.0 30 .................................... TTCAACTGGTGTTTTAATTTTCCTTAGCTG 2738 36 100.0 30 .................................... CGACTCTGTGGCGATTTCCATGCGGGACTA 2804 35 97.2 0 ...................................- | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 99.5 30 GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Left flank : ATCCACTATTTATTTCAACAATTAAAAGAAATAGCACGGGAAACAAATCAGTTAAAGTTTTTTATTTTTAGTAATCGAAGTTTGCCTTTGGCTTATACAGAAGAAGATATTGAGAAAACGATTTTGTTATACGATCAGTACCAACAGTTGCCAGCCTTTGATATTTTTCGTCAAAGTATTGAGCGTCATTATCCCGATGAATTTGTTTGGACGAATCAGCAATTGGTTGATGCTTTTTATCGAGTCTGTCATTTTGTTGGTGATCAGTATACAAAAAATTATCTTTTACCTAGAGATATGATATTATTAAAATTGTTAAAAGAATTGTTAGATGACAATAGTGAGAGTGTCGAGACGTCGATGGGAAAGCTCACTGTGTTGGAAGAACAATATTTTCGTGAACGGTTATTGTGGAAAGAGTGAATCTGGGATTTTGACCGCGTAAAGTTATATTTTTTGTCAAAAAGCTTACTAATGAGATTTCAAATTTTAAATTTGAG # Right flank : | # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 941-48 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUBS01000057.1 Enterococcus faecalis strain CVM N52467 N52467_S2_L001_R1_001_contig_57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 940 36 100.0 29 .................................... TGCTGTTTCTTTACATATTTGTACGTACT 875 36 100.0 30 .................................... ATCTCCTTTAATACATTTTTATTAAAGTAT 809 36 100.0 30 .................................... GTTAGCCATCTCATAGTTTAATGCTTCATT 743 36 100.0 30 .................................... TATTAATGACATTTTTATATAACTAATAAG 677 36 100.0 30 .................................... CAAGCTGGTGATATTGTTGAAGTAGATGTT 611 36 100.0 30 .................................... TGCTTCCAGTAACTTCTTGCACTTTATAAC 545 36 100.0 30 .................................... CTGTTGCAGAAGATGCAGGAAAGCAAGTAC 479 36 100.0 30 .................................... ATAAACCACAATATCTAAATATTGTTAGGG 413 36 100.0 30 .................................... CCATATCTTGCCAACCCGCGTTAGAATAGT 347 36 100.0 30 .................................... AGCCAACCTTTGCTTGTGGATCTGGCAAAT 281 36 100.0 30 .................................... AAGAATTCTTTAGTGGACTTTGGGATTCAA 215 36 100.0 30 .................................... GGGGGAAAGTCAATCAATTAACCCCAGTTT 149 36 100.0 30 .................................... CCATCGAGTTACAAGATAGTTGAGGGCTTG 83 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 100.0 30 GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Left flank : GCCAGATTGGACTTGACTCAGACCTGTTCCGCTTCCGCCACCTTGGACATTAATAAATCTTCCCGGATTTTGGCTTTGATATTCCTCACTCGCTGTCTCTACTAATGGTTGTAAAGCTGATGAGCCTACCGCTGTGATGGATTCACCACGATCAATCCATTTTGCACATCCTGTTAAAGTAAGTATACTTGCCAAACCAATAAATAATAGCAATCTTTTTTTCATCGATTCATTATTCCTCCAATTAATTTCAATCTATTCCATTTTACCATTATATGTAGGACTTGAAAATTATAAGTTATCAATTTGTTGGTACAACTGAGAAAACTCTTAAATTAAATAACAAAAAGTATCTGAAGAAGCCAATTTGGCTGTTGCTTCAGATACAAACAATTATGCTAGAAAGATGTCTATATTTAAGAATTTGGTGGGAATGACTTTATTTGAAAGATTATTGGGAGTACAAAAATAATTTATTCATGGTATCTCCTTTCAATAAA # Right flank : CCAATGAGGTTGCCTACCACCCTACCCACCTGTTTTACTGATAAGAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //