Array 1 1857090-1855110 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022449.1 Lactobacillus acidophilus strain ATCC 53544 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 1857089 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 1857028 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 1856967 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 1856906 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 1856845 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 1856784 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 1856723 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 1856662 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 1856601 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 1856540 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 1856479 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 1856418 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 1856357 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 1856296 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 1856235 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 1856174 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 1856112 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 1856051 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1855990 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1855929 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 1855868 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 1855807 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 1855746 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 1855685 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 1855624 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 1855563 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1855502 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 1855441 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 1855380 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 1855319 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 1855258 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 1855197 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 1855136 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //