Array 1 21653-22700 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDPJ01000021.1 Vibrio anguillarum strain 040809-1/2A contig_21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 21653 28 100.0 32 ............................ CGTGAGCGCAAATTGCAAGATGGCATCTTCCA 21713 28 100.0 32 ............................ AAACTTAGATTGGCCATTTCGGTAATCGGCTA 21773 28 100.0 32 ............................ ACCATTGGAGTAAATGATGGAATTACATCAAG 21833 28 100.0 32 ............................ AACTGATTCAAAGCGCTGCGCGTAGCGGTTAA 21893 28 100.0 32 ............................ ATAATGTTTCCAGCGTCAGAAGCAAACATATA 21953 28 100.0 32 ............................ GAGCTCATTTGGAATTTGTTGTTGAGCAGCTA 22013 28 100.0 32 ............................ GTCGGGTAAAATTATCGTCGTGCCAAGCACTT 22073 28 100.0 32 ............................ TCTCCGATAAAGCGCGTCAATATGGCGCGCAA 22133 28 100.0 32 ............................ ACTTGGCATATAGCGAATTTCTGGGTCGTTAC 22193 28 100.0 32 ............................ TTCAACACTGGCCGCTGGCTGAGTTTCTGCAA 22253 28 100.0 32 ............................ AAAATGATGCGGTATCTATCGCACTGTTTGAA 22313 28 100.0 32 ............................ TTTAAACTCTTGGATGAGTGAAGAGAAAGCGA 22373 28 100.0 32 ............................ CAACCCAAAAAGCGGTGGCAGTAAAATAAATA 22433 28 96.4 32 C........................... GTGTGGCCATTTACGGTAAGTTAGCCGAGGTC 22493 28 100.0 32 ............................ TCTAGTGCTCCGTTTAACATACCCATGTGATT 22553 28 100.0 32 ............................ AGAAATACTAATTTTGCCGTCTTCGTTATCCT 22613 28 100.0 32 ............................ CACAAGGCCGTTTCGCCCCACTTAAGCCAGTT 22673 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CGATGTAACTTACGTAAGTTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGTCCTATGGGCAGCAAAATCCGGCAAACCGCTGGAGGAATGCTTGGCGGCTTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTCAGATGGAGCAGCAAAGTATATCGCAAGATGGGAGCTTCGATTGCTATGGTTTGAGCAGCAAAACGCATGGGCAGTCAGTATTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATAGTTGCAATAGGTGGGTTTTAACAAGGTAAAAAGATGATTTTTACCCTAACAGCCTGTTGCAGCTTATTTTTATTGGTTTATTCTATT # Right flank : AGCTAGTGATCAAATATGAGACTGATGGAGCTAGCGAAACACGCCAATCTGACCTAAGAAATAGGTATCTCTGCCTACTTTTTTGAGTTTGGAGTATGACAGAGAAAGAGAAGTACATTCACAAATAGTTAATTCATAAATAGTTAATATTTTTATAATTCTGATACCTATACAAATTAGGCTGTCAGCGATGTTGGCAGCCTAATTCACGATGAATGTTATTGACTAGCTAGTTGCACAAATGGAAAAGTTTCCTTTCGATGCCTCCTCGATATAGTTACTCCACCAGCGCATCATTTCTCGACGCTGGTTAAGATACAACGCCCGATTGTAAATACCTCGAACTTGATTTCTATCTACGTGAGCGAGAGCAAGCTCAATAACGTCATTATGGAAGAGTTTGGTTTCATTTAGCGTTGTACTAGCTAGAGCACGTAAACCATGAGACACCAAACGATCTTTAAAGCCCATACGTTTAAGGGCAATGTTAGCCGTTTGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //