Array 1 42017-41661 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_016802.1 Corynebacterium diphtheriae HC02, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	====================================	============================	==================
     42016	    36	 100.0	    28	....................................	CGCCGCAAAGCCACACCCCTGGTGAACG	
     41952	    36	 100.0	    28	....................................	ATAAACGCCGCGGGCACGTTCATAGCTC	
     41888	    36	 100.0	    28	....................................	AGGGCGACCATCGGACGAAACGCACTGT	
     41824	    36	 100.0	    28	....................................	TCGGTAGCACGGTCAACGATTCAGCGAG	
     41760	    36	 100.0	    28	....................................	ATAAACGCCGCGGGCACGTTCATAGCTC	
     41696	    36	 100.0	     0	....................................	|                           	
==========	======	======	======	====================================	============================	==================
         6	    36	 100.0	    28	GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC	                            	       

# Left flank :   GAGGGTTGCAGGCCGCAAAGTGTATTTATCACCGGTAATGGATCTCTTCGACCGCTGTATTGTCGCTCACTCCGTGGCTACATCACCGTCGATAGCATTTACCGCCGATTCCCTCACAAAGGCGATTGCAGCCTGTGCGCCGAAGTCTGGATGGATGATGCACACCGATCAAGGCTTCCAGTACCAGCATTCAACTTGGCGTAATCTAATCCACGACAACGGCGGTGTTCAGTCAATGTCGCGTAAAGCTAATTGTTACGACAACGCAGTAATAGAGAACTTCTTCGGACACTTAAAAACCGAGATGTACCACGGAGAAGTTTTTGGAACCGTCGAGGAATTCACCCAAGCTGTCGAAGACTACATCCAGTGGTATAACACCGAACGCATCCAACAACGACTCAAGGGCCTGACCCCGATGCACTATCGGAATCAGACCCTTGAACCCCTAACCACCTAGAATTAAACCAGTCCAACTTTTGGGGGCTAGTTCATTAATG
# Right flank :  AGGTAGCCCAAAAAATCCTGTTTAACATGGTTTTTTGGGCTACCTGAAGTCTAAAAAATCGCGAGTTGATCAGGCTTTTCTTCGCCAGAAACCTCTGCAGAAGAAGAAAAACGGATCATCTTCGACCATTGGATGTCCGATACCGAAAGGATTCGAACATCCCCACCTGGGGGTAATTTTTCTTTAATTAATTTCACCAAATTAGATAACTTTGCGGCCAGAGGCAGGTACTGCACATATACACTCAGCTGTGCCATACAGAATCCAAGATCTAAAAGATTCTGACGAAACGCCGTTGCTTGCTTTCGCTGAGTCTTTGTCTTCACCGGAAGATCAAACATCACCACACACCACACCGGATCGCTACCTTTCTTCGGCATCGAAGGGACCTTCCCAAATAGGCGGTACTAATTTCTCAACATCACCTTCCACATACCGCCCATACTGTTGAGCGAACGCGGTAAAAACCGTCGGAATTGACTGCCCCGCAGAATTGAAAG

# Questionable array : NO	 Score: 6.06
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         R [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.20,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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