Array 1 3523389-3523603 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045178.1 Streptomyces tsukubensis strain AT3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3523389 29 100.0 32 ............................. TACGGGCTGCTCACCGCAGGCTCAGGCTTTGA 3523450 29 100.0 32 ............................. GTGGTGACCAAGTCGCTTTGTCGTCACCACCG 3523511 29 100.0 32 ............................. CTCTTCCGTGATGACTCCGGCGTCCTTGCGAC 3523572 29 89.7 0 ..................A..T..T.... | TC,A [3523595,3523601] ========== ====== ====== ====== ============================= ================================ ================== 4 29 97.4 32 GTGGTCCCCGCACGTGCGGGGATGGTCCG # Left flank : GCGGGGGCGGGGCGAGTAGCACGTCAGCAGCCACTGACCAGATCAGCGTACCGGCGGGGTCGGACATCGAGGCGGCCCGTCGCGTCGGGGGTCGCGGCGGGCCTGCGGTGAGTGTGGCAGCCAGTCCCGGCGACGCGGGGCGTTCGGGGTAGGCCGTCCGGCTGTTCCCCGGATGTGTCCTCGACGGCTGCGGCGGATGCTCGGGGGTATGTCTGCGCTGCCGATCACCGTGTACCCGCCGCCTCCGACTGATGGCCGTCGCGTGCGGATCGACGGGGGAGATCCTCGGCCTGGCCCACGACCTGCGGGACATCGCCGAGTTCTTGAGGCGCGCGGGCATGGAGGACATGGACGAGACGGACGTCGAACGGTCCGGGCTGATCGGTTGGCGCGGAGGCGGGCCCGACGTGTGGGACGCGGGTGCATGATGGCCGCGCGACGAGTTGGGCCAATTGACTGAAAAACCGGCGCCCGGCGGGCAACGTCGCAGGTCAGGAAGA # Right flank : GCGAGAGCGCCCCGCCGCCTGCCGGAGCAGGTGGCGGGGGCGGCATCACGCAGTCTCGTCGTAGTCCTCATAGGGCGGCAGGTCGGGCGACAGGAACGGGCTGATGCTCGGTGCCGGGATCGGATCCGGTTCGGCGAGACCGAGGCGCACGAGGCTGCCCTGATCGACCGGCGGCAGGCCGGGTTGGTACGCGGGCTGGGGTTCGGGCATCGGAGGCTTCCGGGTTACTGGCGCCAGGGTGTGAGGTCGAGGTCAGCGGGCGGGTCGGGAGGCGGTCCTCCTGGGGTGTCGGGGCCGACGCGTCCGCCCCACCGCCACAGCTCGATCACGTAGCTGGTGAGGAGCTTGCGCTGTGTGCGTTCGTCTTTCAGTTCCCGGTCGAGGCGCTCGGTGATGGTCGTGAAGTCCGCGCGACGGTTTGCCGCCCTGGACTGGTTGAAGGTCAGGAATCCTCCAACGAGGGTGACAGCCGCCACCGCGAGCGCCGCAAAGTCCACGGT # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACGTGCGGGGATGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 6879176-6879510 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045178.1 Streptomyces tsukubensis strain AT3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6879176 28 100.0 33 ............................ GTTCTCCAGCCGGGCGTTGCGGATCTTGGCGCG 6879237 28 100.0 33 ............................ GCGCTGCTCGGGGCGGTACTACACCGTCCCGAG 6879298 28 100.0 33 ............................ CTCATCACGCGTGGCGAGTGGGAGCCGGGCCGC 6879359 28 100.0 33 ............................ GAGGACGCCGTTGGTGTCGCCGGCGTACGGCTG 6879420 28 96.4 33 ......................C..... TGCCCTCGACACGGCGCACGTCCGCCTGGCCGC 6879481 28 78.6 0 ..TA........T....C......CC.. | CG [6879490] ========== ====== ====== ====== ============================ ================================= ================== 6 28 95.8 33 GTCGCCCCCGCGCCTGCGGGGATGTTCC # Left flank : AGCTTCGGTGAGTTCGCCTACCTCGGCGAACTCGCCATCACCGTCCGCCATCTCGCCGAGGCCGGCAGCACGCGCCGCGCAACGCTGAGGAAGGCAGAGCCGTGATCGAGGAAGCCTCTATCGCCCGCGAGCTGTCCCTGTATATACATAGGTACCCGGGCGAGATGATGAGCCTGGTGTCGGCCCGGAACACCCTGGAGGACCACGCGCGGCGGCGCCTAGTGGCCTCGGGGGCTTGTTGGTGATGGAAGCGACAACCTGTGCGGGGTTGGGTGGCCGATTTGTCTCGTGCTGTCGGTGAGTTCGTCTGTGGCGATGCGGCGCTGAGCGAAGGAACACCGCCGGGTCGCGGTAGCCAGGCGGTACCCGCACGCACCGCTGGGGTGTTGGTCTGGTGGCTTGTCGGTAGTGTGATCCAGACAGTATGTGCGGTGGGGGTGGCAAAATTCCGAGTGAATGAAAACGGCCCTGCCGCCGGACAACGCCCCATGTCAAGAAGT # Right flank : CCTCGCCCCGTCGCAGGTCGACCCCACGGGGTGTGGCGAACGTGGGTCCTCGCCTGTCGGAAGCGAGCCTTGCGATATTGCGGCCTGGGTTTTCGCGGCCAGGCCCTGTGGGGGCGTCGTGGAGGGGGGCCACGTCTCTGACGTTGGCCGAGTCGGGACGTGTGCCCACGGTGACACCACCGAGTTGGGGGGGGCGAACGTGCCTACGCCGTGACTGCCGAGGCCAGCTTGACCCTGTCGGAATCTTGTAGTTTCCCGGTGCGGCAGCATGGTCCTTGGGCATGCTTGGGCAGGTCGGTCCGCCGACCGATGCAGCTGTCGAGGTGCCCGTTGTCCCTTCGTCCCCGTTCCGGTGAGCAAGTCCCGCCCCGGACTGCGCAGGTCGCACGCGTGAGCAAAGCCGGTCGGCGCGACGGCGATATGGGTGCGTGACCGGCTCACTGGGCAATGGCGCGACGAAGACTTCACCGACTGTTAGGGGTCCTTGCAAGGACCCCTAA # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCGCGCCTGCGGGGATGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //