Array 1 8024-7769 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOVV01000123.1 Leptospira interrogans serovar Copenhageni str. 200701182 ctg7180000004824, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 8023 36 100.0 37 .................................... AAAGGATCCTTTGATCAAAAGAATTCGTCCTTGATTT 7950 36 100.0 39 .................................... GGACATAGGACCAAACTTCCCATAATGTATCGTTATGGG 7875 36 100.0 34 .................................... AAGGGGAAAACATTCGTCACCCCGTGAAAAACTT 7805 36 88.9 0 .....................A........T..A.T | G [7776] ========== ====== ====== ====== ==================================== ======================================= ================== 4 36 97.2 37 CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC # Left flank : AAATTGGCAAAAGTCACCGAAGAAGAAGACAATATATTTTATCTGACTCTTTGCACCAAGTGTGCTTCGGGCGCCCATACCCAAGAAAAAAAATCCGCGTGGCCAGAAGCTCCAAAAACATTAAAAATTCTATAATTCAAGTATCTCTTCAGGGCATAGACATAATTCTACTTAAAAAGCAAAACTAAATCTTTGAATCTATATTTAATTCCAAGACATATCCAATCTTTACTCGGATTCAGAAATAGACCCTATCTAATGATTGGCCAACGCTCGTTTTTCTTTCTTGTGAAAATTCCAGCTAAATTTATAATCAGTGACGAGCTTAAACATACTTGAATCTTAATATTTGAAACAAAATGATCCTTGGAAACAAAATATGCACTTCTGAAAAAACCGAACATGAAAAATAACGATAAAAAACGATATACTTGTTCTCCTCCTTTGAAAACACTCATATCCACAATTTATGCTTATAAAAGCCATTTAAATAAAATGCT # Right flank : GAAGAGAAGATTTGTTTTGGCCCAAATTGTTTCGCACCAAACGTGCAAACAGATAAAATGTAGGAACTACTACTTTTTCGAAAAACAGTAGTTTGTTCAAAGAAATGTGGGAACTCCCACTTTAAAAAAAGTGAATTCTGGAGATCTCCTCGGGTAAGAATCGAAAATACCTAATTACAGTAGTAAACATAAATTTGTACTGACAATCATATTCCTCAGCACTTTGCCACTGTAATTGAAAGAACTGGTTACACAAATTCGATCTACCTCTGATGCCGTTTAGGCGATCCTTTCAGAAATTTCCAAATACTATAGAGAAGGTATATCATATTATAAACATGGCATGTTTTTTAGGGTATTTAAAATTATATTTTATTTTAATTTTAGAATATTCTAAAAATATTTTGTCTTTAAAAAATAAAATGGAATCCGAAAAATGAATTTCTCCGAGTATATTGTATGTCCATTCCGAACGTCATTGAGTTAAACTTTCCGGTCCT # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 38123-38330 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOVV01000032.1 Leptospira interrogans serovar Copenhageni str. 200701182 ctg7180000004733, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ====================================== ================== 38123 24 100.0 38 ........................ AAACTCAATGTATCTTCTATGGTTGCTCTGTAGGTCGG 38185 24 100.0 36 ........................ ATGGGTCGGTGTTTAGGTTTTGGGACAGCTCTAAGC 38245 24 95.8 38 ...G.................... GAACTCAATGTATCTTCTATGGTTGCTCTGCAGGTCGG 38307 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ====================================== ================== 4 24 99.0 38 TGGAAACTCAGCAAACACCTCCCT # Left flank : AAGAACCGGGATTGTTTACTAGTATCATTCCGGCTACGGTCATTCCTCGGAATAAGTCCAAGGATAAAATTCGATTTTGATTTAATTTATTTTCCAAATGATAACCTTTGAATTTTTTATTTTCCGAATTATGAAGTTATGTGGATCGAAACATTAATCCAGTATTTTTATTTCTTAGAGTTGTTCAAGCAGCTTCTCGTGTGACCATACAATCAAGTTGTATGCCAACTTTTTAAGAAATTTTGTGAGTAAATTGCTTATTTTGATATCGAATCTAAACTAAGAGCTTGTCCTAAAACCTCAAAAAATTTTACACAATCATTCTTTAGTAATTTTTAATCAAATGTAATAGTTCCTTCAAATTAGGTTGTATTTCACAATTTGTGAACTTTTAAGCGATTCTAATGTCGTTAAATTTTCATAGTAGCTCTCACATTTTTGTGAAACTCAATTTCACTCCCTGAACTCAATGTATCTTCTATGGTCGCTCTGCAGGTCGG # Right flank : TATGGGTCGGTGTTTAGGTTTTGGGACAGCTCTAAACTGGGAACTCAATTTTTCTTTTTGATTGCATTTGGGTTTGTAGATATTCTATTTTGTTTTTCTTATGCCAATTTTAGCTTATCGTAAGTCTATATAGTAATTTTCTCATTGCACTCAGTTGTGCTGATCGTTGATTGTTTCTTAATTTAACATGAGTTTGGTGTAAGAGAATCTTACTAAATCTGGCAGCGTGGATCGGGCTTTTAGCTCTGGTTAATAAATTAAATGCGGGAAACGTTATGCAATGTACTGTTTTTAATTTCAATTTATTAGAGTTGTTGAATAATTAATTCTCCATCTTGTTTTTGTTTCATGAAATGGTCGATTGAAGCAGTTTTGTTAGTCGCCGCTGCTGCTATGGAATTTTTCGGCAACTCTATTGTAGAACGCGATCCGTCGAACGGCCATGGAGAGTCATAACCAACCCCACAAGTATTTGATCTCAATATAAATCTGTCGGAATT # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGGAAACTCAGCAAACACCTCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //