Array 1 176963-180351 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJEP01000003.1 Legionella pneumophila strain 2531STDY5467462, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 176963 28 100.0 32 ............................ TAGATAATTGTTTTGCACCTGTTGCAAGTCTA 177023 28 100.0 32 ............................ GACAGACCCAAGCTACACTGCTGGTAGAGTTT 177083 28 100.0 32 ............................ AGCTTCACAATCACTAACACACATATTGTGTA 177143 28 100.0 32 ............................ TGTAACCTTGATTCTTGACTATTAAAATCCCC 177203 28 100.0 32 ............................ ATATAAGAACAATCGAAGTTCCAAATGTGGAA 177263 28 100.0 32 ............................ CCAAATTAAGCAGCATTCTTCAATACTTTTAC 177323 28 100.0 33 ............................ CCATATGATACGCAGACAATTGCATTTTTTGCT 177384 28 100.0 32 ............................ TTTTAACAATGCGTTGTTCATTGCGTTTATTC 177444 28 100.0 32 ............................ TAGTATTGTAACTGGTCAGTTTAGGTCTAATT 177504 28 100.0 32 ............................ TTTAGAGATATGTCATTTGTTTGACCATCAGA 177564 28 100.0 32 ............................ TCCAATGAAGAAGCCTAGAGAAACAGACACAT 177624 28 100.0 32 ............................ CACACCCACAATAAACGTCATTGTCTTTGTGC 177684 28 100.0 32 ............................ ATTAGTTATTATTAATCGTGATGATTACCGAG 177744 28 100.0 32 ............................ TCTGAGTTAGAGCAACTTGAAAAACAAATACA 177804 28 100.0 32 ............................ AATAAGTAAGATTTTCCACATCCTGGGCCACC 177864 28 100.0 32 ............................ ATTAAGTCAAATAAAGTTAAGAAATTTAATTT 177924 28 100.0 32 ............................ TTATGGAACGACAGCATGTAAATGGGATACAG 177984 28 100.0 32 ............................ GCTAGTTTTCCAACTTAAACTAATTCCTACTC 178044 28 100.0 32 ............................ AGCAATGAATTTGATAGGCTAGCGGTCATTTA 178104 28 100.0 32 ............................ TATTAATAATATTTTAGAAGATTGGCACATAA 178164 28 100.0 32 ............................ ATTTAAAATCAGGGTGAACCTCAAAAGGAATC 178224 28 100.0 32 ............................ CTCATGACCTTTAGCCGTAGATATAAAAAGAT 178284 28 100.0 32 ............................ TCAACGCCCTGCGCTCAACAGGATTAACCTTG 178344 28 100.0 32 ............................ GACTCCTCAACTATCTGTTCAATTGGTTTAGG 178404 28 100.0 32 ............................ ATCAGCGAGGGAAACATCAGTTCCTCCGGTTA 178464 28 100.0 32 ............................ TATAGAGTCGAATAATACTTCTCCTCAGTTTA 178524 28 100.0 32 ............................ GTGTATATGATTTAACGCTGATTTCATGGGGT 178584 28 100.0 32 ............................ TTAATAGTTGTCTGATTATCTTATAATAAAGT 178644 28 100.0 32 ............................ AGTTTCTATCAGGTATCGGCGGGTAATCATAA 178704 28 100.0 32 ............................ TTTGGACGTTTTATCCTCCACAGTATGCCAGT 178764 28 100.0 32 ............................ TACACTCATAATTGAAAGTAGTGCAAAAATAA 178824 28 100.0 32 ............................ TATGGTGACGACTTAAACGAAGCGTTAAACGC 178884 28 100.0 32 ............................ TACATGCAAAAAGGCGGTAAAGCATGGCAATA 178944 28 100.0 32 ............................ TAAAGCCGCCGGAGCTGTCACTACGTCATTCG 179004 28 100.0 32 ............................ AATAAGATGAAAAGTTGTTGACAAAATGTACT 179064 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACTATTAATC 179124 28 100.0 32 ............................ ATCTAAAAATTGTTGAACAGTTGGAATTGGCT 179184 28 100.0 32 ............................ AACATGGACTAAAATATCAAGAGGCATAGCTT 179244 28 100.0 32 ............................ AAAGAAGAACATAGCCAGCCTACTAGCCCTTA 179304 28 100.0 32 ............................ TTAACAGTTAATCTTTCAACATCAGATAAACT 179364 28 100.0 32 ............................ GTCAGTTGTTCGATAGTTATCGATTATAAAGC 179424 28 100.0 32 ............................ TATAGGCGTGAAACAGAGCGTTTATTGCAGTG 179484 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACCATTAATT 179544 28 100.0 32 ............................ TCATAATTTGGAATTGGGGTAAAATGCTCGCC 179604 28 96.4 32 T........................... AATGTCTGATGGATCGATCATACAAAGCCCAA 179664 28 100.0 32 ............................ TAATGTGCCAACAAAATACAAGTCATTGACAA 179724 28 100.0 32 ............................ GAGATATTATCTTTGAAATCCATTTACCGCAG 179784 28 100.0 32 ............................ GTTTATTCGCCAGTCTCGCACCAGTATGTATT 179844 28 100.0 32 ............................ TTGTACAATGCCATCAGCTAATACATCTGTTT 179904 28 100.0 32 ............................ AAGATGAGACAACGCAGGCCAATAAAAATCAA 179964 28 100.0 32 ............................ ATCTTCAAAATATTCATAATCATTGGATTCAA 180024 28 100.0 32 ............................ AACATGCGCACGAATTAGCCAAGTTTGCAATA 180084 28 100.0 32 ............................ GGTAAGCCTATGTCCTCGACCAGACGGTCATC 180144 28 100.0 32 ............................ AAAAGATGAGGCTACAAAGTCATTAATCAAAA 180204 28 96.4 32 .............T.............. AAATCCCCAAAATCGCATTTGAACTGTAAATT 180264 28 100.0 32 ............................ GTAGGAATATTTATATTGTATGTTGTTGATGA 180324 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : AAAGCACGTACGTACAGGGTCAGATCTTGCTTTTTGCCTTTATCCATAAAAGACGACAAGCTTGGAATTACCGCTTGATAATTATTTCCCAATGCATTAATTTTCTATCAAAAGGAATTAAGCAAGTCCAGGAACAGCGATGGTAAGACCTTTGCGTATTGAGTATGCTGGTGGGCTCTATCACATCACCAGTCGAGGGAATAGAAAGGAAGCGATCTATTTATCAGATGAAGACAGAGAGAATTTTTTATCTGTTTTGGGTGATGTTTGTTTAAAATATCAGTGGTTATGCCATTCGTATTGTCTGATGACAAATCATTACCATTTACTCATTGAAACTCCGCTCGGTAATCTTTCAAAAGGAATGCGCTATCTGAATGGGGTATACACTCAGAAATTTAATAAATCACACAAGCGAATTGGGCACGTCCTGCAAGGTCGCTATAAATCTATACTGGTTGAGAAAGACAGCTATTTATTGGAGTTGTCGCGTTACATAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //