Array 1 3-368 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FOCW01000001.1 Brachymonas denitrificans DSM 15123, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
         3	    32	 100.0	    35	................................	GCTATCTTGTAAAGCGTCGTGCGCGAGATTGCCAG 	
        70	    32	 100.0	    36	................................	TGCAGCCAGGACGCTGCGCAGTCCAGCTCGTCGCCC	
       138	    32	 100.0	    35	................................	TCGATGCTTTGACGAATCATCTCCAGATCGACAGC 	
       205	    32	 100.0	    33	................................	ATCCAAGAGACCGCGATTGATACGCTGGAACAC   	
       270	    32	 100.0	    35	................................	AACCGAAGCCGCCCTGGCAACAGAGGCGGCTTTTT 	
       337	    32	 100.0	     0	................................	|                                   	
==========	======	======	======	================================	====================================	==================
         6	    32	 100.0	    35	GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC	                                    	       

# Left flank :   CTG
# Right flank :  CGGGAATGCGAGATCGGTACGCGTCCGGCAAACCCATCTTGAAACGGCAGCCGTAATCGAGGATCGTCCCCACGAAGGAGATCGTGGAGACGATGGAACGCTTGATCGATGGAGAGCGCCGGCTGCGGCGCGCATACGTATTGCCGAGAGAGTAGTTTTGCTGGAAAGCGAACTCAGATCGGAAGCAAGGGTAATTTTGTCACTACTTGGAAGAATAGCCACCTGAACCACTTGGAAACATCCCGCTGCAGCACGACTGCTTGTAATCAACGAAAATTAGCTAGCGTAAGCAACTATCGATTTCTGTTGCCGGCTTCCACTACTCCCGATCCCCCCACCATGCCCCAGCTCTTCGACTCCTACCCCCTCTCCGGCCACACCCTCGCCAACCGCACCGTCATGGCCCCCATGACACGCGCCCGCTCGCCCAGCCATGTGCCGGACGAGATGGTGGCCACCTACTACCGCCAGCGCGCCAGCGCCGGCCTGATCGTGACCGA

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-6.80,-7.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [1.7-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9,1.01   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//