Array 1 93138-94194 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAENCB010000001.1 Staphylococcus pseudintermedius strain HSP127 contig_1_segment0, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	====================================	=========================================	==================
     93138	    36	 100.0	    37	....................................	TCCGTTCATGTTGAAAACACGTTTTGGTGGTTATGAT    	
     93211	    36	 100.0	    36	....................................	ATGAATTAGAAGAGTTCTACTCCTTTTACTTTGAAG     	
     93283	    36	 100.0	    37	....................................	AAAAAAAGAAAAAAGGAATTGATACAAATGAAAAACA    	
     93356	    36	 100.0	    35	....................................	TAATCAACCTCTTTTTTAATTTTATTTGTCGTTGT      	
     93427	    36	 100.0	    36	....................................	CTAATGTAAACCCTTATGAAATTATTAGACAGCTAC     	
     93499	    36	 100.0	    38	....................................	CAGATTTTTCCAGAATCCTCGATTTTTTCTTTCTTGTT   	
     93573	    36	 100.0	    39	....................................	AGTGCGCCTATAATTTGCGTAATTTCAACAACCATTTTG  	
     93648	    36	 100.0	    35	....................................	CATAACAATAATTATTTAAATATAATTCTGTTTCA      	
     93719	    36	 100.0	    37	....................................	TGAAAATACCGTTGCATAACTTTAGCGAAGTCGTTTA    	
     93792	    36	 100.0	    35	....................................	TATCTATTGTAATATTAATCAATGTTCCCTCGTGA      	
     93863	    36	 100.0	    38	....................................	TTTCATGTTCTTTACAATAGTTTCGAGGAGTACAACCC   	
     93937	    36	 100.0	    37	....................................	TGCGCTAATGAAGCTAAATTGACGCCCTTTATATTCA    	
     94010	    36	  97.2	    36	........................A...........	CGCCAATGATTTCAGCAAATTCAAACACCATTTTTC     	
     94082	    36	 100.0	    41	....................................	CCTCAATACCTGTACCAACTTCTTTTCCCCAACCAAATACA	
     94159	    36	  88.9	     0	............C...T..T............A...	|                                        	
==========	======	======	======	====================================	=========================================	==================
        15	    36	  99.1	    37	AATCGAATAGAGACCCCGACATTAGGGGACGAGAAC	                                         	       

# Left flank :   TATGAATGAAGTCGGATGTGTCGCGTACAGTAAAAAAGTGGGAGTATGGTAGTTTTGGCAATTGAATAGGCTGCGGAAATATGTTGACTGCAAAAATACATTGCACATTCCGATGAGCTTTTTGAGTACGAAAAAGTTAAGAATAAACAAAAATTGAATTGTGCACAGCTACAGCATATTCGACCAGAAGTTAAAGGTTAAAGAGAAGGTGTCAGTATACAAAGGAAAAGTGGAAAATATACGATAATTACCATGAACAAGAATTGATTTAAATGAAAACGTTCAAAAAGTGTAGAAGAGGATAATCATGTGGAGAGGATATGAATTGGGAAAAATTTATTGTATAATATCGATGATGTGTTTTGAAAATTTTTAGTTGGTTGAAACTGAAATGTCTAAAAATTGGACAATTAGGATATTTTTAATGTTAAAGTTGTCTTAATTTCAGACGCGGTTAAATGATAGATATTCTCGCTATCAAGGGATTTCTATAGCTGACT
# Right flank :  CTTTCAGCAGCCTGAGAATATTCTTTTTCACTCAAGTCAATCGTATTGAAATACGGATATTAAGGGGGCTTATACCATTTATAGTATTTATAAAGTGCTTTTAAGGAGAGGTTACGATATCTGGAGCGTTGAAAAATGACATAACAACATAGAAAGATGAATGCAACGTTTTAAAAATTACAAATAATTCACAATTCTATTGTTGGAAATAAAGAAATGTTGTAAAATTTAATTAACATTTCAAGCGATAAAATGGGGTCTTATACATCTTGATGAATTTTTGTATTTATTGCATATTTTTTAGTCATAGCCATTTAAAGTGTATGTATTAGTGGTTTTGATTGGAATTTTGAAGAAATAATAAGCAGATTAAAGGTGTTGAGATTGGATATACTACTATATTGATATAATGACTCACTGAATCGTATTCTTGCTTTTATCTAGGGGGTGTAAAGATGAAGGATATCATTTATGTTGAGAATCATCATTTTGTCAGTGTG

# Questionable array : NO	 Score: 3.21
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATCGAATAGAGACCCCGACATTAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [14,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.30,-6.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.15,0   Confidence: HIGH] 

# Array family : NA
//