Array 1 560789-560514 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB850938.1 [Clostridium] clostridioforme CM201 acBRh-supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =============================== ================== 560788 32 100.0 28 ................................ GGTCTAAGTAATACCACTGTCCTCCCAG 560728 32 87.5 28 CCT............................C CGTCCAGATAATACCATCTTCCATTAAT 560668 32 81.2 28 ...............CT....TT.A......C CGTTCATATAATACCATTTGCCGTTGAT 560608 32 78.1 31 ...............C.T...GATA...T... ACGGATTCAGATAATACCAGGTTCCGTCCAG 560545 32 71.9 0 CTT...............A...TA...CT..T | ========== ====== ====== ====== ================================ =============================== ================== 5 32 83.7 29 GGCCTGCCAGCCGGTGAGCATAGCGCCGCTGG # Left flank : TGACCGTAATACCTTCAGACAAGCGCTTTCCCAGGGCCAGACGTGTCCCGCGCACCTTGATGATAACGCTTCCGCTGCCTTTCTTATTCAATATATTCACCGGCGTCCCCTCATTGACCCCCAGGGCCTCAAGACGTCTGGTAATACTCTCATCCACTTGCACGCCCGATACTACATACCGGCCGCCGATTTCACACTCGTTCAGCTTTTTCTGCATTGCTGCCTGTCTCCTTTTGTAGTTGCATTTTAACCATATTCATTGTATGCTTATTGCGAAAAAATGTCAATAAAAAGAGTTTGTTATGACAAACTCAATTTCAAAAAAGAGGATGCAGCGAATCTCTCCGCTGCATCCTTTCTATACGTTTCGGTTCTATTAATATTGATTTTAGGCTTTACTGCACCCAAGCTCCGGAACCATCCACATATTTTCCATCCGGCGTCCATGTATTATAATACATGGCTCCGTTGGTGCCCAGATAGTAGTACTTGCCATTGAT # Right flank : TATTAAAATAATACCATGCGCCGTTAATCTGCTTCCAGCAGGATGCCGGATATCCGCCTGTATCATAAGCATACCACACGCCTGTACCGTCCTGCTCCCAATGCCCGCTTCCGCCATAGCGGCCAAGCTCATCCTCATCAATATACAGGGAGCTGGAATCCTCGGACCATTCACCTGTCTTATTGTTGTAACGGGAAATGGCCCTTACACGGAAGGTATAGTCTCCTTCCCGGTTAAAATAGCCTGCAAAGTTATAGGAGGTTCCTGTGGTGCTGACCGTAGTGACTGTCTTGTCGTCACGGAGGAGTTTCACATCGTAGCTCTTAGCGCCCTCAATCTCCTCCCACTCAGCCGTGGTGTCACTCCACTCCAGATCCGACGCGCCCTGAAGCTTACCGCCGATACGTTTTAGCTCAGCATACACCTCAATGTACTGGCCATCGTCATAAATCTTTGCTTTCTTGAAATCCGCATTACATCCGGAAAGAGAGAAATGGCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.19, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCCTGCCAGCCGGTGAGCATAGCGCCGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTGCCAGCCGGTGAGCATGGCGCCGGAGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.30,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 334044-335560 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB850939.1 [Clostridium] clostridioforme CM201 acBRh-supercont1.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 334044 33 100.0 34 ................................. AAAGGATTGCCAACTTTAAAAGGTTCAGAAAAAC 334111 33 100.0 33 ................................. TTAACAATGTACTACTTCCAATTTCAAAATGGG 334177 33 100.0 37 ................................. TAATATTGCTATTGTGTAATTCTCAAAAAAATGCTAT 334247 33 100.0 35 ................................. GGACCAGCGCATCCATCTCAGGGTATCCTCTCCTC 334315 33 100.0 33 ................................. CCCCTCCATGGTCAGGGCTTCCAGGCGGATGTC 334381 33 100.0 34 ................................. TGGAGAAACAGTCGGAGTATATCTCCTGCGAGGG 334448 33 100.0 34 ................................. CTACAGGAACGCAGGAGCCGGCCATCCAGGAGGG 334515 33 100.0 34 ................................. ACTGCAACACTATCACAATGCCAAACTCCGACCA 334582 33 100.0 34 ................................. CGTATACTCAGACGGTCAGTGTACCGGGAGCAAA 334649 33 100.0 33 ................................. CTAAAAATAGGTATAAAAAATACAGCTCCGCAA 334715 33 100.0 34 ................................. ACACTCATGTCGAAAATCAACATCCTGATAGTCT 334782 33 100.0 35 ................................. TGTGTTAGAAGATGCGAAAGTCTATGTTGGTTGGG 334850 33 100.0 35 ................................. TGTCCGGTAGACTTATATATATACTGCATGGGACT 334918 33 100.0 37 ................................. AAAGTTGGCCTGTATCTCAATCATAAATCGCTCCTGG 334988 33 100.0 34 ................................. TCCGTGATATTCGCAACCTCACTGGAATCCGGGG 335055 33 100.0 34 ................................. CTCGCTCCCAGGCTTAGCCTCGTAGCTGTACACC 335122 33 100.0 34 ................................. ATAGCCTGTGCCACCTTCCACCAGGGAAGGCCGT 335189 33 100.0 35 ................................. ACAATATGCAAACAAGGTAACGTTTTTTGATACCC 335257 33 100.0 35 ................................. CTGTTCTCATGGTTCTTTCCTTTCCGATTCTTGTT 335325 33 100.0 36 ................................. TGCCAAACTGACCAATTACCGGATTGAGCAGCTAGA 335394 33 100.0 34 ................................. TTTTTTAGTCCCTGGTGAGGAGCCCGGCTGGAAA 335461 33 100.0 34 ................................. ATCCCTCATTGCCTGGAACGCGTCTCTCGCCGTA 335528 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 23 33 100.0 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : TCCTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTATTGCGCATTTACGATGTCAATGATAAGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGTCCGGGAGATTCGCACCTGAAAAACAGAGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGGGGGGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : TATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCCGATTTCGTGATAGGCCTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTAACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGCAATTACCTAATGCAGAACCATTTCTGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAGCTCATAGAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1007217-1005323 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB850936.1 [Clostridium] clostridioforme CM201 acBRh-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1007216 32 100.0 34 ................................ TTGGAAACAACAACTATGATATTACCGGTTATGC 1007150 32 100.0 34 ................................ AACAGATATGAAAGAGGACTTCGTGGAACCTCTC 1007084 32 100.0 34 ................................ TTCAAAATCGCCAGTCCATTTACCCCTATGGAAA 1007018 32 100.0 33 ................................ TCCGCCTCTGCTATAAAACCTATCTTGTCAGGT 1006953 32 100.0 34 ................................ ATACGGTATCTCTCCGCTCTCGCACATCTCATGG 1006887 32 100.0 36 ................................ CACCTGGGCCGGGGCCATGGATGCAAGGTCCAGGAG 1006819 32 100.0 34 ................................ CGTCAAGTATGTCGGATGTGGGAAAACAGGCTAT 1006753 32 100.0 35 ................................ CCCCAGGCGGGTACCGCAATGGTATCCAGTCATGA 1006686 32 100.0 34 ................................ ACCCGAGATGTCCAGAAGGTTACTTTCCAGCCTT 1006620 32 100.0 35 ................................ ACAAACCTTAAGGTCACTGCTTACAACGCTTATGC 1006553 32 100.0 36 ................................ ATATCTTTCCCTTTCCGCCCTTCCGGGCAATAAAAT 1006485 32 100.0 35 ................................ AAGCGAGTGAATTAAGAACAGTAAAAGTGCGCAGA 1006418 32 100.0 34 ................................ ACAAAGATGACCACGCGCCTGCGGGATGGTGGAT 1006352 32 100.0 36 ................................ TACCTCTAACATCATAAAGGTAAGGGTGCCCAAACA 1006284 32 100.0 34 ................................ AAAGTAGTAGTAGACTTAGCATGTCCCAGGATAC 1006218 32 100.0 33 ................................ CCTACAAGGAGCGCATTATATACTCTTGCTTGA 1006153 32 100.0 34 ................................ TGTACTGAATAAGAGTAATACCCCCGCTTGCCAC 1006087 32 100.0 34 ................................ CTCGAACCGAAACGCCTTTAATGTCGCCGTCCCC 1006021 32 100.0 35 ................................ TCCACAATCTTGACAATAGTCTTGCCCCATCTCAA 1005954 32 100.0 33 ................................ TTGTGCAGTATTTCAATGCGGTGTTTCTGGTAA 1005889 32 100.0 35 ................................ GCTATTATCTTTTTTACCTCACTTTCGCTGATTTC 1005822 32 100.0 37 ................................ CCTTCCTGGCCGTCCTGCCCTTCCTTGCCTGCCTGCT 1005753 32 100.0 35 ................................ ATCATGCCGTTCGTGATTCCCACGCCCGCCGCCGT 1005686 32 100.0 34 ................................ CCTCACGTGCCCGTCCCCGGCCGTCTGGTACTGC 1005620 32 100.0 34 ................................ ATCCATTAACTGAGCCGCAAGCTCACCCGTCTGC 1005554 32 100.0 34 ................................ AGACCAGCAGACGGCCGATTTTATCAATTGTGTC 1005488 32 100.0 36 ................................ ATGGACATGTACCGGCTGGCCGTTGACTGGCTTATG 1005420 32 100.0 34 ................................ CGCAATCCGCAGTGCACCTCTGGCATCCGTAATC 1005354 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 29 32 100.0 35 GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Left flank : TGCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGAGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTGCAGGGATGGTTGGCCGTGATTTGAGGGGGTGGGATATGATTTGTTTGTGGAAATGTGTTGAAGAATAGTAGTGGTTATTGTGTAGTATTGCT # Right flank : TCCGGGGTAGTCTCATAGCCGTTCACATAATAGCGTCTCCGCTCTCGCGTCGGAGCAAGTTAAAAATCCGCCAATTACAGAATTACATCCAGTTGCCCACTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCAAGCCCCATCCCTTCCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCTCCGCCGATTCCGATGGGTTTGCCGTCTGCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCTGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGTCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.10,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //