Array 1 667484-667186 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134327.1 Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 667483 32 100.0 34 ................................ AGATATTTTTTGTGTTTCTGTACATAACAATAAT 667417 32 100.0 33 ................................ TTAAAACCCAAAAATTCAGATTCACCATTTTTT 667352 32 100.0 36 ................................ ACCCATTATGCGGCCGAACTCTCCCCATCGTCGCCA 667284 32 90.6 35 ..C.....C......T................ GGCAAAGGCCACGGACAAGCAAAACCGATTGAACG 667217 32 90.6 0 ......A.C..T.................... | ========== ====== ====== ====== ================================ ==================================== ================== 5 32 96.2 35 GCAGCCGCTTTCGGGCGGCTGTGTGTTGAAAC # Left flank : TTGATGAGATAAGTCATGTTAATGCTAATTACTTATGATATTTCTTTTGACGATCCAAATGGGCAAGCGCGATTGCGCCGCATCGCAAAACATTGCTTAGATTACGGCGTGCGGGCGCAATATTCGGTATTTGAATGCGATGTCACGCCTGACCAATGGGTTATGTTGAAAAACAAACTGTTGGAAACCTACGACCCCACGTGCGACAGCCTGCGTTTTTACCACTTGGGCAGTAAGTGGCGCAATAAAGTGGAGCATCATGGGGCAAAACCGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACCCTGATGGGATAGCGATCCTTATTTTCTTTAACAATTTGGATGAATTAATCTATTTGTATAACGACAATGTGGCCGTTATACTTACCAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATCTGCTGATTTTTCTTACTTTTTTAGGTAGGGA # Right flank : AAGATGTCGAGCAAGTCGTGCTCATTTTGTGCGGTGGCAGCCGCCTTCGGGTGAGTATATATTCTATCTTTATGAAAAATAAGTGATATATAAGTTTCAAGCCTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTGGGGTCAGATTATTTTAACCGCTCTTTTTGTTGACCTATGCTGAAATATTATTACATTTTCGGAATTTCAACGCCTGAAGAGAGTAGGTCTTGAATATCCGATTTCAATACATCAGCTTTTGGCCCGTAAATGGCTTGAATGCCTGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGCCGCTGCATCGCCCACCAGCTCAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCTACCTCAGCAATATTGTTGCGTCCACCCAGTAAATTTACGATTTGCACTACTTGCGC # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCGCTTTCGGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.10,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //