Array 1 1367-2115 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMR010000031.1 Vibrio metschnikovii strain M19X Scaffold31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1367 28 100.0 32 ............................ GACCCATAACCGCGCCTAGACTTTATTGCAAC 1427 28 100.0 32 ............................ ATATAGTTAAGTTCGTCAATAACACCTCCCAT 1487 28 100.0 32 ............................ GTTTGAGAACGAAGCGGGCGAGAAGTTTACTC 1547 28 100.0 32 ............................ AAGTCATGGCGCTGACAACCTCAGACTCGTCG 1607 28 100.0 32 ............................ TCAGAGCGAGTAAAAATCCGAACAAGCTGCGC 1667 28 100.0 32 ............................ CGATAAGCACTGGGGCGGCCTCTTAACTAAGT 1727 28 100.0 32 ............................ ACGCTCGATAGCTTCGACACGCTCGATAAGCT 1787 28 100.0 32 ............................ CCGCCGCATTGCGATACGTCAAGTGATCATCA 1847 28 100.0 32 ............................ GTGATGTGAGCGGAAAGTGCGAACGAGTGAGG 1907 28 100.0 32 ............................ CGCTTGCGTTTGCAACGGGTATTTCATTTGGT 1967 28 100.0 32 ............................ TCGGAACGTGTCCAAGTAAAATTATCGGCAAC 2027 28 100.0 32 ............................ ATTTATGGGGATTGTAAATAGCGCAAAATGGG 2087 28 100.0 0 ............................ | A [2110] ========== ====== ====== ====== ============================ ================================ ================== 13 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TCGGTAACTTTGCCCTGATAAATTGTGCTCGCAAAAGGTTCAATTTTTGCTGAAAGGTCTCTTCCTTTGGTGTTGTTGACCCCTTGATTCCGTAAGCTAATTCGCTTCAACCTATTTGGGATCTTATCGGCAACAATACTTGCTGAAAGTAGGCAAGTTTATCATTTTGAGTTAAAGTGGCTTGAACCAATAAATTTTGAAAAAGTTCAATTTAATCAATGGGTAATAAAGCATAACAAACGCTTCAAGAGGGACTTCCAACGCGCGGCATTTTTACTATGCGTTGGTTTTTGTGGTTACAGTGTTATGCGGAAACTTGGTAGTAGCGTTGTCAGCCCCTTAAGCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTTTATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATT # Right flank : ATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTAGCCGTGCTATTTGAATTCAACGTTAAAAGTAATAGGTAGGATAAAAATGAACTTAGAAGCATTAAAAGAAATTATTGATAATTGCCCAGTTATTCTTGAAGAATCTGCTCGTAGCAACGGTGCCGATGAAAGGGTGATTATGGGAATAGCAGAGTTTTCCTGTCGAAATGGTTATGAGGCTCTGTCTGAAAGTCAGAAGTATCACTTTGATAAATCAATCCGACATTTGATCGAAGATGTCCAATGCTCAGGCTATACGCATGAATTTGAAGAAGAACATCAAGAATGCCCCAATATCTTAGATGACGATGACTTGGTTGCGTATTATCAAAATGACGGTGCGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //