Array 1 1-1463 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLEE01000214.1 Acinetobacter baumannii strain ABBL050 contig-4000037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 61 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 121 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 181 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 241 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 301 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 361 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 421 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 481 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 541 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 601 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 661 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 721 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 781 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 841 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 901 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 961 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1021 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 1081 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 1141 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 1201 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 1261 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 1316 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 1376 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 1437 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 25 28 97.7 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 929-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLEE01000285.1 Acinetobacter baumannii strain ABBL050 contig-6000070, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 928 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 868 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 808 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 748 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 688 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 628 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 568 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 508 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 448 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 388 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 328 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 268 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 208 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 148 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 88 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 28 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : AGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCT # Right flank : A # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 27330-22799 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLEE01000201.1 Acinetobacter baumannii strain ABBL050 contig-37, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 27329 29 89.7 31 ....G.......CC............... TATTGTGAGCACCTTGATTGCTGTGCGCTGC 27269 29 89.7 31 ....G.......CC............... ACAGCGGGAAACTTGAAAGTCATTGCGAAAT 27209 29 89.7 31 ....G.......CC............... GATTGCCCCCTGAGGAAACTGTATAAAGTCC 27149 29 86.2 31 ....G.......CC..............A AACACCAACTAAGCCATTCCCTATTCAAAAA 27089 29 86.2 31 ....G.......CC..............A TGAACTTTTAATGGATGCATGCGCCGCCCAC 27029 29 86.2 31 ....G.......CC..............A CGAACAACGATAATTTGGAATACACGCTCAT 26969 29 89.7 31 ....G.......CC............... CAGGAGAAAGATCGTTCAAAAGCTCAAAACC 26909 29 89.7 31 ....G.......CC............... GAAAGTTTTGATATCCACTCTGCTGTTTCAA 26849 29 86.2 31 ....G.......CC..............A GATGGTAAGAAAATTATTGAGTCTGGAGACA 26789 29 86.2 31 ....G.......CC..............C GACAGTCCAGTTGATCAGATCTTGATTAGAC 26729 29 86.2 31 ....G.......CC..............A ATGACATGGTTCAACAATTAAATTCATCTCA 26669 29 86.2 31 ....G.......CC..............G TTCTTTTCTGCAATATGTGCCATTAGGTATT 26609 29 86.2 31 ....G.......CC..............A TTTTAGATGAAACAAAAGATAGCAGGATTAT 26549 29 86.2 31 ....G.......CC..............A GACCAAGCGGATTGACCGTATTGATAAATAA 26489 29 89.7 31 ....G.......CC............... TCTGCAATACAAATCACTGGATCAGCCAGGT 26429 29 89.7 31 ....G.......CC............... GAGTCTTTGATTTCCCAAATATTACTTGAAA 26369 29 86.2 33 ....G.......CC..............C CTGAAAAATTTCACTGTGTCCATTTCGTTATTA 26307 29 89.7 31 ....G.......CC............... ATGTCTTTAAATTCTGAAAAAACACTTGTTC 26247 29 86.2 31 ....G.......CC..............G AAAAAATTGAAAACTTTTTAGAAGTAAATGA 26187 29 86.2 31 ....G.......CC..............G CCACACATGCCTAAAAACGCAAGTGCGCTCG 26127 29 86.2 31 ....G.......CC..............A TTATCAGATAAGCCTTTTATGAATGATCGTT 26067 29 86.2 31 ....G.......CC..............A TTAGCTATTAGCTTTTTGGCAACAACAACAG 26007 29 86.2 31 ....G.......CC..............A GTTCATGAAAACAGCTTTAAAAAGAAAGCAC 25947 29 89.7 31 ....G.......CC............... CCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 25887 29 89.7 31 ....G.......CC............... TGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 25827 29 89.7 31 ....G.......CC............... GGTACGACAACTACGAAAAGCTGAGCAAAGT 25767 29 89.7 31 ....G.......CC............... CAACTTAAATGGATGCTCCCCGCGGTGAATT 25707 29 89.7 31 ....G.......CC............... TGATTGCTAGACGGATTTTTAGGCAGATCAT 25647 29 86.2 31 ....G.......CC..............G AGTTTAATGCGCTATATGGCGACGAGGATTT 25587 29 86.2 31 ....G.......CC..............C ATGCAATCGCGTTGATTACCGCAGCTTCGAA 25527 29 86.2 31 ....G.......CC..............A TGAGCCGCAACCATACGGTCTATGACTTCCA 25467 29 86.2 31 ....G.......CC..............A TAGCGCCCTGCTCTATGTTGTCACTTCCGAA 25407 29 89.7 31 ....G.......CC............... CCAAGTGAATCGGCTCCTAATGCAAATGACC 25347 29 89.7 31 ....G.......CC............... GAAAACCAATATGCTGCCTAATTGCCATAAG 25287 29 86.2 31 ....A.......CC..............G ATCTGCGTCCATTTGTACTTGCTGCGGGTGC 25227 29 96.6 31 ............................A TATACAGCACCGCTTAGTGCGACGCGGTCAT 25167 29 96.6 31 ............................G CCCACAGGTTGAGCATCAACGGCCATCGAGA 25107 29 96.6 31 ............................A TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 25047 29 96.6 31 ............................A GAAGGCCCGTAATTTAACTGTAAGCCGTGGT 24987 29 100.0 31 ............................. CTTCCTGAGTTTTAATCCCATTTGCCTTACA 24927 29 93.1 31 ......T.....................C ATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 24867 29 100.0 31 ............................. TCAGGGAATTATCGTGAAACTTTCATTGACT 24807 29 100.0 31 ............................. GCACCAGCTGCTGGCTGGTTGAAATCTGCAA 24747 29 96.6 31 ............................A GAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 24687 29 100.0 31 ............................. GTTTCAAAAGCTACACCATCAAAACCATTGC 24627 29 100.0 31 ............................. ATTTAAGTAATAAGTTTAATAACGACCTAGT 24567 29 96.6 31 ............................A ACACGTTCTCTATATCGCTGTTTGCGGTCAT 24507 29 100.0 31 ............................. TCAGTTGGATATGCCTTTGATACCAAGAAAC 24447 29 96.6 31 ............................G CCTGCAGACACGGATTTACGCAGCTGATCGA 24387 29 96.6 31 .........................C... AACCAAACTATGTCATCGATCGGAGATTTCA 24327 29 100.0 31 ............................. TAAAATAAATGCCTGTGGTTTTTTCTTAACT 24267 29 96.6 31 ............................A GTTTCCGAAGTTGAATTACACTCGCCAAGTT 24207 29 100.0 31 ............................. AACACAGTGATTTGATTACCTTGAGCAACCC 24147 29 96.6 31 ............................A TCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 24087 29 100.0 31 ............................. CATCCACCTTTGATGAAACGGATCCACGCAA 24027 29 100.0 31 ............................. CTTGTGTGACGGCCTCCACTCCAGATCCCGC 23967 29 100.0 31 ............................. TAAGCTTCAAAAATAGCCATTGATTATAAAA 23907 29 100.0 31 ............................. GACAACTTTCCACGGCAATCAGGGCTTTCCA 23847 29 100.0 31 ............................. AAAGATGCACGTGGCCTAATGCAAGTTATTC 23787 29 100.0 31 ............................. TTAAAATTAGGTGCTGAGTTACCACGGCTCA 23727 29 100.0 31 ............................. AAACCAAGAACTTGAAGATTTTGATGCTTAT 23667 29 100.0 31 ............................. AAAAATAGTGTGTTAATTATTTATGATGAAA 23607 29 96.6 31 ............................C GTATACATGCACATCAATACGATATCCCGAT 23547 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 23487 29 100.0 31 ............................. GCAGCTACTCGACATGTTGGTAGGGCAGATG 23427 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 23367 29 96.6 31 ............................A GATTGAGGCGATTTTTATCGCGGACATTGCC 23307 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 23247 29 100.0 31 ............................. CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 23187 29 96.6 31 A............................ TATTATTAAACGGGAAAAGTATATTCTTGCT 23127 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 23067 29 96.6 31 ............................A TCATCAATAAGTTGGCCTTGATTTAAATAGT 23007 29 96.6 31 ............................A GATACAAACGAGTTCGCATCTCGACCAGAAG 22947 29 96.6 31 ............................A TTATCCAGATAAAACCATATCTACAAAGTGG 22887 29 100.0 31 ............................. CAACCTGAACACAGACATACATGTTCTATTG 22827 29 86.2 0 ...GC...................AT... | ========== ====== ====== ====== ============================= ================================= ================== 76 29 93.2 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //