Array 1 127202-127941 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NDHL01000003.1 Corynebacterium diphtheriae strain rz656 rz656_contig000003, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	====================================	============================	==================
    127202	    36	 100.0	    28	....................................	CTCACCGAGAAGGTGAAGCTTTTTGATA	
    127266	    36	 100.0	    28	....................................	TCGCCGGTGTTCTTGTCTCTCCACGTGT	
    127330	    36	 100.0	    28	....................................	TTCGAACAGTGCGGACGCGAGGCAATCG	
    127394	    36	 100.0	    28	....................................	GTAAGCGGCAATCTACAGAGGTGTAAGT	
    127458	    36	 100.0	    28	....................................	CGGAATGGCTAGGGGAGCTGTGGGAAGG	
    127522	    36	 100.0	    28	....................................	TCCCGCCAGTGCTCAACCACTACTTGCC	
    127586	    36	 100.0	    28	....................................	TAGCCGCACGTGACTCCTCCACAGCGGA	
    127650	    36	 100.0	    28	....................................	CTTGATGTGGGGTTCGTGAAAGCGGATG	
    127714	    36	 100.0	    28	....................................	ACTGGTTGCTTTGCATCGAACGGATCCA	
    127778	    36	 100.0	    28	....................................	CGATGTACTGAAAACCCGCATGCGGGTG	
    127842	    36	 100.0	    28	....................................	CGGCTGATGGTCGCAAAACTTCCGAGAC	
    127906	    36	 100.0	     0	....................................	|                           	
==========	======	======	======	====================================	============================	==================
        12	    36	 100.0	    28	GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC	                            	       

# Left flank :   ACACCATTACTTCATCAAGTACTGCGTCAGTGACCGCGGAAATCGTCTCATGGGAGATGTCCACCCGCATAACAGTGGCCATATGGTGCCTGATATCGCGCACGGTCATCCCACTGGCATACAAGCTCACGATCATGTCATCGACATCCGTTAAACGCCTCGAGCCTTTCGGGACCATGGTGGGAATATACGTCCCAGCTCTATCCTTGGGGACGTCTACGGTAACTGGCCCGTCGTTGGGATCAACAGTCTTTAGGTAGGTGCCGTTGCGATAATTGTAGATCCCAGCAGCAGCTTTAGCTTCGCGATTTCAGCATGAGCAAGCAGCTTTTCCTCAGGTCGCGTCAATCTTGGCCTTATCAGCCGAGTCTCGTCTTACCACAGTAGTCATTCTGACTTATCTCCTTATGCGGAATAGAATCCCAAACACAAACCATCAGGCACCCTCATTCCCAAAAACCCTGATAAACTTCTCCTACGGTTCATCCCCGCTGGTGCGG
# Right flank :  CAGGTAGCCCAAAAAATCCTGTTTAACATGGTTTTTTGGGCTACCTGAAGTCTAAAAAATCGCGAGTTGATCAGGCTTTTCTTCGCCAGAAACCTCTGCAGAAGAAGAAAAACGGATCATCTTCGACCATTGGATGTCCGATACCGAAAGGATTCGAACATCCCCACCTGGGGGTAATTTTTCTTTAATTAATTTCACCAAATTAGATAACTTTGCGGCCAGAGGCAGGTACTGCACATATACACTCAGCTGTGCCATACAGAATCCAAGATCTAAAAGATTCTGACGAAACGCCGTTGCTTGCTTTCGCTGAGTCTTTGTCTTCACCGGAAGATCAAACATCACCACACACCACACCGGATCGCTACCTTTCTTCGGCATCGAAGGGACCTTCCCAAATAGGCGGTACTAATTTCTCAACATCACCTTCCACATACCGCCCATACTGTTGAGCGAACGCGGTAAAAACCGTCGGAATTGACTGCCCCGCAGAATTGAAA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.20,-3.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.64   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//