Array 1 2681-201 **** Predicted by CRISPRDetect 2.4 *** >NZ_WDOX01000016.1 Bifidobacterium bifidum strain BIOML-A21 scaffold16_size10392, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2680 36 100.0 30 .................................... CGGTGTCGTCCTCGTCGAGTTGTTCTTTTT 2614 36 100.0 30 .................................... CCTATGTACGTAGGCCTGATCGTTCCATCG 2548 36 100.0 30 .................................... TGAACTGAGCTGTGTACTGGCCGCGCGTTT 2482 36 100.0 30 .................................... TGGCCGTACCGTCATTGTCGATGGATGTAT 2416 36 100.0 30 .................................... CGAGCATCGTCGCCGTCTTCTCGAGTTGCT 2350 36 100.0 30 .................................... GTTTGACATGTGCGGTGTTGTGTGCTACGT 2284 36 100.0 30 .................................... CCCGCCAGATCTCACGGGCGGCGTCACATT 2218 36 100.0 31 .................................... TCCGGCATTCGCGTTGTAATGCTCTTGCGTA 2151 36 100.0 30 .................................... GAGCTAATCGGAGAGGATTCTCAGGAGATG 2085 36 100.0 30 .................................... CCGCGTTGCGATGCATAGGACGTTCCGCGC 2019 36 100.0 30 .................................... CAGCTTTGGTGGTGCGTGGACTTATCTCGC 1953 36 100.0 30 .................................... GCGCGTCCAGTAATTCCACGTCGCTCACAT 1887 36 100.0 30 .................................... GTTTCTACTGGTGCTGATAGACTATATAAC 1821 36 100.0 30 .................................... TTTTGGGAGCTTGATTCTGCCGTGATTTGA 1755 36 100.0 30 .................................... GACGGCAGCCGCCACCGACATGACCGCAAA 1689 36 100.0 30 .................................... GCATAAGATCGGCATGGCGGGCGTGGACTA 1623 36 100.0 31 .................................... TCAGGGATATCCTCATCTGATCGTAGCCTGT 1556 36 100.0 30 .................................... GCAAATATCGTCCAGTTGTTCGGTACACGT 1490 36 100.0 30 .................................... AGAACGTCGTTGCGGCGAAACCCTTCATCT 1424 36 100.0 30 .................................... CGTAGGCATGGGATTGTTCGCGGTAGCGTT 1358 36 100.0 30 .................................... CATCACACGGCACCCTCGAAGGCGAGAGCA 1292 36 100.0 30 .................................... TTTGACGACGCCGAGCGTGGTCGCGGTCGC 1226 36 100.0 30 .................................... CGCGGTGAAATTCCCGTGGCAAGACTAGTC 1160 36 100.0 30 .................................... GAATTCTCAGCACTTTCCGAAGGCTTATCA 1094 36 100.0 30 .................................... TGCCGTTACAATCGAACCCAGCTAAAGACG 1028 36 100.0 30 .................................... GCGATGCGGACACATGGCATAAAATGCGCA 962 36 100.0 30 .................................... TTTCCACTGTTGTTGTGTTGTGTGTTGTGT 896 36 100.0 30 .................................... TAAGCCAAATCGGACTACCGCCGTCAACGT 830 36 100.0 30 .................................... TTGTGGTGATGTTATTGCAGCCGAAATACA 764 36 100.0 30 .................................... CAACAATCTCAACGGCATGGCCAGCATTGT 698 36 100.0 30 .................................... TTTGACGCACCGCTAACAATTTCGGACTGC 632 36 100.0 30 .................................... TGACGTGACGTTTGGTAGCTGCTATGTGAC 566 36 100.0 31 .................................... TACAGCAGCAGAAAAAGAAGAGCACGTATGT 499 36 100.0 29 .................................... TCGATTCACCACAATAAACCAGATATGTA 434 36 100.0 30 .................................... AAGTCGGTGATCGCCGCCGCTGGGGTGAGT 368 36 100.0 30 .................................... AAACTCACGCCGCTTAACTTGGCCTGCTGG 302 36 100.0 30 .................................... TCATGTCTAACTATATTCGTGGTTAGATAT 236 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== =============================== ================== 38 36 99.9 30 GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC # Left flank : ATTGCGCGGATGAAGTGGATTATAATGCTTTGTTCCAGAAGCTTGCTGTCAAGAAAATAATCGAAGGATTTACGCCGGAGCAAATCAGTAGATTATTGTCTTTGCAGGCTGAGTTAAAAACAATTATTCAAGATGAGATATGGGGTCAAAATCTACCTCTGACTATTCCCTGCGATTTGGATTTGAAAGCAGCAATTGCAATGGCCAAACCTCGGATTGACACGAGTTCTTTGGGATCCTTGTATGATAAAATTTCGACGGCAGTAGATACTGCCGGTGCTCTTGCCGAGAGCAGGATGCTGGTGACGCTTCATACAACTCAATACTGTGATAACGACCAATTACTTTATCTGCACCGTACTTTATTGCGGTACCAGTTGCAGCTTCTTGACCTGGAATGCTGCAGCAAGAAAGTCATGCTGACAGAGGGGATGAGCCACTATGTCGATGAGGATTACGTTCAGTTCTCATGAACTGTTCAGGAATCCTTAAGGCTATCG # Right flank : AGTGATGCGCAATAGTGTTAGGGGCACCTCTGTTGCTGTCTTCTGGATAGCTTCCGGGGTGTGCTTTTGATTCTGGTGACATATGGGAAACGATTGATGCACAATATTCGGACTGTTATAGTGATGTGTTTTGTCAAGTTGTTATAGGCCAGTGTGGCGTGAGTTTTCCTTCCGAAAAAGCGGTAGGTTTTAGTCCAGTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //