Array 1 6431-6824 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGP01000101.1 Streptomyces sp. 2R contig19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6431 29 100.0 32 ............................. GACTGCGGCGACTCCCAGCTCGGCGCCGGGGG 6492 29 100.0 32 ............................. ATGCGGAACAGGACCTTCGAGAAGTCGTACTC 6553 29 100.0 32 ............................. CTGACCGGAACGGTGGTCGCCTGATGGTGGAC 6614 29 96.6 32 ......G...................... GGCAGCGCGACTTATTCACGCGGGTGGCCCAG 6675 29 100.0 32 ............................. ACCGCGCAGGAGGCCCTCCTGCGGCTGCGCGC 6736 29 96.6 32 ............................T TTCCACTGGCTTTGCATGCGTTGCAGCAGAGC 6797 28 93.1 0 .................-........T.. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.0 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TCCTCCTCAGAAGAAGGCGCTTCACCCAGCCACTGCTCAAGCCGCCCCTCCTCCTCCAGCAGATCCCACTCGTCCTCGTCCAGCAGGTCGGCCAGCTCTTGGTCGGAAGCCTCGTTCTTCATGTACCGCTCGTCGTACCGCTCCAGGAAGCCACGCCATTCCTCCGGCGTGGTCAGGGTGTCGGTAACTCCGCTGTCTGCAGCCTTGGTTGTCTCATCCATGCGGGTCATGCTCGCAGGCCCCTATGACATCGCGGCCGGCCCAGGGCCGGCCGCCGAGGCCCGGCACGACCACCCGCACCTGCGATTGGGGCGATCACGCGCCACCAACCGGATGCGGTTGGCGCTCGCGTGCCACACACGGTGTCGAAGAGGGGCAGAATCAATCCTGAAGTATTGGGCTCAAGCGGGGGCTCTTTGCTTGACGAGGGGGATATGTCCGTTTCTCAAGAAGTAAGCAAAAACGAGCCCTCGGCCGCATAAACCTGCAGGTCACGAACT # Right flank : CGTCAGCACGGCAGGGCGCACGATCCCGGGGCTGGTTGGTTCTCCGCGCATGCAAAGTTTGGTCATGCTCGCCTACCAGGACACCAAGCACCACCGGTGACAGAACCCCTCGACTGCGCTGCTACGCCCCACAGCAGAAAAGGGTGTCTCGCCCGCCGAGCTGGTGAACGCACACGGGTTATCCCCTGGCGGGCCGGATAACCTCATGCGGGTCTCGTAGCCACACCTGCTGCCCCCGGTCGGTCACGGTGAGCCCGAACTGTTCGGCGTCGGGTCGCCCGACGGACTCGTACTCCCACCAGGCTTGCTCGATCTCCTCCCACAGGAGCCCGGGCCCGTACTGCCACACCTCCTCCCCGGTCGCGGCCGTGGCGGCGGCTCCGTCCTCGCGGGTCGCCCAGACCTGGGCGCCCTCCGGGGTGTTCTGGTGGATGAGCCGTACGCCGGGCAGCCGGGCCCCCGCGTACACGGCGAACCCGAGGTCCAGGAGCCGGGCGGGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 11343-11554 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGP01000101.1 Streptomyces sp. 2R contig19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11343 29 100.0 32 ............................. TCCCGGGACTCCTACGACCTCGACCCGGTCCT 11404 29 100.0 32 ............................. GTGTCGGCAAGCATGGGCTTGTACCGCCGGGC 11465 29 93.1 32 .................A..........T CCGGTCTACCTGCCCGGCCTCTACAGCGCCTC 11526 29 89.7 0 .....................A..G...G | ========== ====== ====== ====== ============================= ================================ ================== 4 29 95.7 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CACCGCGCTCGGGGAGGGCAGGAAGTAGCACTGGTTCAGGGATGGGCGACACTCCCCGACACGGCACCGAGCGATCCGGGCCACGTGGCGTGATCCCCGCTTCCCGCCCATCATGCAACCCAAGGGCTTCAGTAGGGGCTTACCAGGGATCACAAAGCGCGCCCGTCCCAGCCCCTTCCGTTCTCGTAGTCGCCGCGACACCCCGACTCGTAGATGCGATGGAACTCGAAATCCGGGAGCACCGGAGGGCCATACCCACCCTGTCTGGGCGACGACCTGCGTATTGGTGCCCTGGGCGGCCTCCGAACCTCGCCTCAGGTTGAGCGCGCTGCAGGAGAATCGAGATCGCACGAGCGCTGCTGACGGGCAGATGGCAGAGTCGGGCATCGAGACAGTGAGGGTTGCACGACTTCCGATGGGGGCCACTGGGAGATATGTCCGCTTCTCAAGAAGTAAGTAAAAACGAGCCCTCAGCCGTATAAACCCGCAGGTCACGAACT # Right flank : GCCAGGCATCGGCGAACCGCTCGTCATGCCCCCCCGGGCACCGGGCACCAAGCACCAAGCACCAAGCACCAAGCACCAAGCACCAAGCACCAAGCACACGTAACGCCGCCCTCCTCCAACTCGTTGTCGCCAGAGGCGAGAGACATGGGTGGTCGGCGCCCGTGAAAGCCCAGGAGGCTTGGGAAACATGATCGAAGACGGCGGCGGCGCCCGAGGATGCCCGGCATCGCGGGAGGAGCCGCGCGTCGCGCACTCCCGTACGCTGCGATTCTGGCTCGATCCGGCGAATATCGCGGTGCGCCTCGGTCAGGCAGGTCCCGTCGCCAGGACGAAGGCCGGACCAGCGGTCGCCTTCCAGGTCAACGACCCGTCGCTGATCCGAAAAGTCGGCTGCGGGGAGGACATCTTCCAGGCCTGGAGCGCGGACCCGTGCCTTCGGGACTTCACCGGAGACGGCTTCGCCGGGGCCGAGGGCCAGGCCCACCGGGACCGGCGCGCGC # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 17512-17845 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGP01000101.1 Streptomyces sp. 2R contig19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 17512 29 96.6 32 ............................A CGTCGGCTTCGAGCGGCGCTGGTACTTCGAGG 17573 29 100.0 32 ............................. CAGCCCCACAATCTGCTGCTCGTGTGCACCGT 17634 29 100.0 32 ............................. AGGGCCCAGCCGGTCCATCCGGCCACGGCCAG 17695 29 100.0 32 ............................. GCCGCGGTGTAGGCGTGCTCGGCCTTCAGACC 17756 29 100.0 32 ............................. GAGAACCCCTACCGTCGAGCACGGTTCACGGG 17817 29 79.3 0 ..........TA.C.......C.CG.... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.0 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : GAGACGACGGACGTGGGCACGGCAATAGCCGGCGAATTGCAGCTGATGGATCCCGATGTGCGTGCGTCACGGTCACTCGCCGAGCGGCTCCTCGAACCGGAGTTCATCGAGGTCGGGCCTCGGGGCGGCGGTGGACGTATGAGGAGATGCTCGCCGCACTCCCCGAACTGAGCGGCGGGGACTCGGACGGCCCGTGCCACGAGAAATCCAGCATGACCGGTGTCGTACTGGCCCCAGGGGTGGTGCACCTCACCGACGAGAGTGTCCTCGGCGGCAACCGGGCCCGCCGGAGTTCGTTGTGGCGCAGGAAGCATGGTGAGACGGCTTGGCAGATGTACTACCACCAGGCGACGCCTGTCCCGGCGGGTGAGGGGCAGAATCGCTCCTAACGTGCACGGCTTACAGCGAGGACCGTTCGCGGCACGGGGGGAGATAGGTCCGTTTCTCAAGAACTAAGTAAAAACAGCCCATCGACCGCATAAACCCGCAGGTCACGAACT # Right flank : CGCTGCCCGGCGGCCCCGGCGGACCCGGTGCAGCTGGTCCCCGCGCGCCCGGTGCCGCCCACTCACACCCCCGTAGGCGGCGGCACCGCCGCAGCCCGCAGGCCCAGGCGGTCGTGCTGGTCCGTGATCTCCGTCGGGTGGGCGGCCAGCAGGCGGCCCGCTACCGGGAGCGGCATGCGGATCACCACCGGGCGCGGGAGCGTCAGGTCGCGTTCCGCCACCTCCGTACGGGATGCGCGTACCCGGTTCGTCACCCGGGCCACCACCCGTACGTCCAGCGTGAACTGGACCAGCACCGACGTGAACTTCGGCTTGTGCAGGGGCATCGAGCCCGCTCCGTTCGCCGCCGCGCCGCTCGCCGAGCCCGCGCCGTCCACGTTGCCCATCAGCTGGTTGAGGCGGAACTGGTCGGCGTTCAGCACTCCGGCCCCGAACAGGCCGCGTGCCTGTCTGCTCTGCTCGGCCTGGCTCTGGCCCTCCGTCTGGGTGGGGCGGGGCGC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 16729-17894 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGP01000057.1 Streptomyces sp. 2R contig15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================== ================== 16729 29 75.9 47 .C.GG.G.G.G....C............. AGGTCCACCATCAGGCGCCGCGAGCTACCCCCGCGGGCGCGGGGACG A [16740] 16806 29 93.1 32 AC........................... AACGTTTTCGGGGCGGCAGCCGAAGGGGACGG 16867 29 100.0 32 ............................. CTCACCAAGGCCCGCACGATCAAGCTCACGGC 16928 29 100.0 32 ............................. ACCTCGCGAGTGCTGGTGGCTCTCGCAGTCGG 16989 29 96.6 30 ...................G......... TGGGTGGAGCGCGGCCTCCCGAGGAACCCG 17048 29 82.8 32 C..TG...TC................... TTCGTCACGAACGACTACACGGCCATGTTCAG 17109 29 100.0 32 ............................. AGGTCCACACCGGCGGCCACCTCACCGTCCGC 17170 29 100.0 32 ............................. ACCTCAGTCGCTCTCGCGTCGACGCCGCCCAG 17231 29 100.0 32 ............................. GGCACGGTCGGCCTCCTTCGTGGTGGGAATCG 17292 29 100.0 32 ............................. TCACTGCGATCTGGTGCACTCAGCGCCCGGAG 17353 29 100.0 32 ............................. TACGGGACGGGGCTCTTGCGCTGGGCGGTCAC 17414 29 100.0 32 ............................. CGGGCGTGCTCATAGCGGTCTCCTGGCGGGTG 17475 29 100.0 32 ............................. CCAGCGTTCTCCGCGATCGACACCGCGGGCCG 17536 29 100.0 32 ............................. TCCGGCCGGGGGCCCGTTTGTGACGCCCCGGC 17597 29 100.0 32 ............................. TGCGACCCGTGTCGTACGGACGGTGCGGACTG 17658 29 96.6 32 ............................C TGCACGAGGTGCAGGAGCTCCTGGCCCAGTCC 17719 29 96.6 32 C............................ CCGCATGGGGCGAACGCCGACGAGTGGGATGC 17780 29 96.6 56 ............................A GCGTCGCGGGTTCGGGGTAGTTTCTGTGAACTGCAGGGTCGGCAGGTCCAGCGGGC 17865 29 79.3 0 CG........A......CA.....G.... | A [17890] ========== ====== ====== ====== ============================= ======================================================== ================== 19 29 95.7 34 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GGAGCTACCCCCGCGGGCGCGGGGACGACCCGTACTCCCGTCCTCCACCGGGCCGGGTCGGCGAGCTACCCCCGCGGGCGCGGGGACGACTTGCCCGGCCCGTCCCGCTGGTTCGGGCCGCCGGAGCTACCCCCGCGGGCGCGGGGACGACGCTGTGGCATGACGGACGGATCCTTCTCCATGAGAGCTACCCCCGCGGGCGCGGGGACGACGTGGACGACGTCGGTGTGGCACATCGACGACGGGAGCTACCCCCGCGGGCGCGGGGACGACGTGGACGACGTCGGTGTGGCACATCGACGACGGGAGCTACCCCCGCGGGCGCGGGGACGACAGCGAACAGGGGCGAGCATGATGCTCCTTCGGGGAGCTACCCCCGCGGGCGCGGGGACGACGCTGAGTGCGTAGATGAATCCGCTGATGGTGGCGAGCTACCCCCGCGGGCGCGGGGACGACGATCTGCTGGTAGCTCTTGCGCTCGGACCGGAGGAGCTACCCCC # Right flank : GCTGACCGTCCAGTGGGCGCAGACCGTCTCCAGCGCCACCTCGAGCATCCGGCCGTCGGGTGACCCGGATCGCCTGACACCGGCGCATCATCCGCCTGATGATGGCTCCCTCATTACGCAACGTCCTGGGGGGACCATGCGCACCCGCACCACCATCACCATCGCCCTCGCAGCCGCGCTGCTCGCTCTCACCGGGTGTAGCAGCGAGCCCGAGACCACCACAGTCACCAAGAGTGACGCCAAACCGGAACCGGCGATCACCACTGCCAGTCCCACCCCCACGCTTGAGGAGCAGACCACCTTCAACGTGGGCGACACCGCAGACATCGACGACGCCCCCAATAACGTCGCCTTCAATACCACCGTTATCGCCTATACGCAGCCAGTGAAGGGCCCGCAGCCGCCCAGCAGCGAACAGGGGGGCGACGTATGGGCCACCGCCGAGGTCAAGGTCTGCAACGTCAAGGGCGACACAATCACCGTCAGCCAGTTCCCCTGGT # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [8-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [21.7-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 18734-19927 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGP01000057.1 Streptomyces sp. 2R contig15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 18734 29 89.7 32 ............TA.....G......... GAGGCCGGGGTCGGCGAGCACACACCGGGCCA 18795 29 89.7 32 .C........T..A............... GTTCCTGCGTAGACGACGCGGCCGTTCTCGGC 18856 29 100.0 32 ............................. GGCGACCCGCGGTCGCAGTCCGCGCGGTCTCC 18917 29 100.0 32 ............................. TCGATCGACGTCATCCAGGGCACCCCCGCCCT 18978 29 100.0 32 ............................. GAGGTCCAGCGCGGGAAGATCGACCCCCGCAT 19039 29 100.0 32 ............................. ACTGGATGGACCCGGCGCAGATGACTGCTTCC 19100 29 100.0 32 ............................. TTGTCGGCCGCCGGAGCCTGACCTTGGAGACC 19161 29 100.0 32 ............................. CTCGGGGCGTGATGGTCACGCGCTGACCTCTC 19222 29 100.0 32 ............................. GCCTTCTCCTCCATCTGCCCGAGATAGACGAC 19283 29 100.0 32 ............................. GTGCTGGCCGAGGCGTACGCGCTGGTCGTCTA 19344 29 100.0 32 ............................. GTGAGCCGGGTTGTGGGGGCGGACAGCGTCGC 19405 29 100.0 32 ............................. GATGCGGTGACGGACCTGGCGGCGGTCGTCAA 19466 29 100.0 32 ............................. GGACGGCGCTCGCACCGGCCCCGGCGTAGGTG 19527 29 96.6 38 .G........................... GCGTCGATGTCGATGTCGATGCTGGTGCAGGCCGCACC 19594 29 100.0 32 ............................. CTCAGACCAGCCTGGCGCCCGACAGCTCATGA 19655 29 100.0 32 ............................. TAGTTGCCCTTCTTCGCCTCGTACACCACCTG 19716 29 100.0 32 ............................. CAGGTCGACCGCTACCGGCCCGGGAAGCGCAC 19777 29 100.0 32 ............................. ACCCTGTACAACCAGCCCGTCGCCCTGGCCCT 19838 29 96.6 32 .......................A..... CACTTCCAGTTCGTCGTCCAACGGCTCCACAA 19899 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 20 29 98.6 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : AATAACGTCGCCTTCAATACCACCGTTATCGCCTATACGCAGCCAGTGAAGGGCCCGCAGCCGCCCAGCAGCGAACAGGGGGGCGACGTATGGGCCACCGCCGAGGTCAAGGTCTGCAACGTCAAGGGCGACACAATCACCGTCAGCCAGTTCCCCTGGTCTCTCGACTATGAGGACGGCACCCGCATCCAGGCGACCGGTCTCGGTGGCGGTGACCTGCCCAAGCCCGAGTTCCCGAACGACGCGATGGTGAAGGCCGACCGATGCGTGCGCGGAAAGATCCCCTTCCCCGTCCCTAGTGACCAGCGGCCCGTCCGCATCCTCTACGCCCCCGAGTCGCTGGACGAGCCGTTGGAATGGGCCGTTCCCGCCAAGTAGCTGGAGGTGGCGCCCATGGCTGGTAACTCGCGCACCAGGGCGCCCCTGCCACCCCTGCCACCACCTCGTCGCCGCCGTGCAGGTCCTCGTTGTCCCCTGCGCCCGCTGCGGCCATCGCGCTG # Right flank : GGCCACCCATGACTTCACCTTCCGGAAGGTGAAGTCATGTCCCAGACACGCTTAGGGCCCCGACGGCCCTCCCCCGGCCTGGTCCAGACGGTGATCGTCAGCTACGGCGACGGCCACCACGACACTCCTCGCGGTGACGCGCTGCGTATCGACACCCGGCCGCTGCGCAACCCGCCCAGCGACCCCGTCGTACGCGAGCGCATGCTGCACTCCACCGGCCTCGACCCCCACGTCCAGGCGTACGTGCGTGCCATTCCCGGTTTCGAGCGGATCGTGCAGCGCGGTCTGGACCACGCACTGGCGCTCCTGGCTCTGCCCGGCCGCCGGTTCCGCGTCGACATCCACGTCACCTGCGGCGGGGGCGGCCACCGCTCGGTTGTCGTCGCGGAGGAACTTGCCACCCGGCTCCGGGATCGGAGTGGAGACCGAGCACCGGCACGTCGACCGGCCGGTCCTGACGTAAGCCGGGCACTGATCACCGAGCACGAGCTGGCCGCGCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,1.05 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //