Array 1 31076-32568 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBDG01000018.1 Limosilactobacillus fermentum strain 39 Contig_43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 31076 29 100.0 32 ............................. GAGCGTAACAGTTACTTTAGTCGGGCGTCTGG 31137 29 100.0 32 ............................. TTGGTAGTAATCCCTAGTGGCCATGTCAATGG 31198 29 100.0 32 ............................. GAAGATGAACGACAATCAACATTTTTACAGCG 31259 29 100.0 32 ............................. CTAGCTAACAATCCAATTGGTGGCTGGGTCTA 31320 29 100.0 32 ............................. GTACAGCAAAGCATACGACGAAGAAAGCAAAG 31381 29 100.0 32 ............................. AACTTTGAACCATCATTAAGGTTAAAGGACTG 31442 29 100.0 32 ............................. TTGTCGAAATCTTCGATACCTGCTTTGTCGCT 31503 29 100.0 32 ............................. ACATAAGCAACGAATCCCGAGCAGTCCCAACC 31564 29 100.0 32 ............................. ATGGCGGGTGATATTAATACACTTGAAGCGGA 31625 29 100.0 32 ............................. GGGTATGATCAAATCTTAGCCGCTATCAACGC 31686 29 96.6 32 ............................A CAGGACACCGCGCTTCAGATCACCAACGAATG 31747 29 100.0 32 ............................. ACTTTGCGTAGCTATCAAGGAAATGTGATAGC 31808 29 100.0 32 ............................. CTTGGTAATAGATTTGCCGGCTAAATAGTCCG 31869 29 100.0 32 ............................. CTTGATGATGCCGAAAGGACAACCATTACAAA 31930 29 100.0 32 ............................. TATTTCGGGCCGATTGCCGCTGCTTGCTGGCG 31991 29 100.0 32 ............................. GATCCGGTAGCTTAACCATCGCATGACAGCCA 32052 29 100.0 32 ............................. TACGGACTATGCTTTGACCTTAGACATGGCGA 32113 29 100.0 32 ............................. CTTGGATGATTTCGGTACTGAAGGCGGAATGA 32174 29 100.0 32 ............................. AATAGCTTTTATCACTCGCAAGCATGGCAAGC 32235 29 100.0 32 ............................. GATGAGGTCGATCAACTTCGCCCGCCAGTATT 32296 29 100.0 32 ............................. TTACGCAGGATAGCCAAGCCGTGACAATGGGC 32357 29 100.0 32 ............................. TCCGTGAATTTCTTTTCCGACATCCCGGCCGA 32418 29 100.0 32 ............................. GATACTCATCATCCATATGCAGCATAGTCAGT 32479 29 100.0 32 ............................. TATAACGAGGTGATAAACATGGATCACATTGA 32540 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 25 29 99.9 32 GTATTCCCCATGTATGTGGGGGTGATCCT # Left flank : ACAAACAGTGAGATTATTTCAATCAGTGCAGTAAAAAGAACCAATGAACAACAAGTAGAGAAATTTAATCGATATATTAAAATAGAATCAGAAGTTCCAGCTACTATTCAAAAATTAACGGGGCTATCCAACGATTTTTTAAACTCAGAGGGTGAATCCTTAGAAAAAGTGTTGGAATACTTTCAAGTCTTTATTGGTAATAATGTTCTAGTTGGTTATAATTTGCTTTTTGATCAAAGTTTTCTTAACGCTGCATTTATAAAAGCAAATAAGCAAATTATTTCAAATCGTATGATTGATTTAATGCCAATTATAAAGAAGGATCAAAAGTTTTTAGATAATTATCGGTTAGCAACAGTTCTTAAGAATTATGGAATTGAGAATGACCATCCGCATAAATCTATATCTGATGCAATGGCTACTTTGGACCTAGCGCTTAAACTAATCAAAAATGACAAACTAAGGATCTAAAAAAGGCGTCATATAGGGATCTGTTTACG # Right flank : TTGGTTATGTCCGTATAATTGGTGTAAATTCTAAATAGGACTTTGTGAAATCTGAAAGGAACTTCATTATGCCAAAGGTTGAATTAAATTTAGAAGATGACGAATTAAAGGAACTATTACTAGGTGATCGGGATAAGGTCATGCAATCAATTATGGCCAAGATCCTTGATGAAATTCTTAAGTCCGAAGCGACTGAGCAGATTAAAGCTAAGGCTTATGAACGTTCGGATGAACGAACCAATTCACGGAATGGTTATCGGGTTCGTCAGCTTACCACCCGCGTAGGGTCTCTAGAACTACACGTTCCTAAACTCCGTCATGGCAATTTTTCAACACAGCTGTTCAAACGCTATCAGCGTAGTGAGCAGGCCTTTGATTTGGCATTAATGGAAATGGTAATCCAAGGTGTTTCAACACGTAAAGTAGCTGAGATTACTAAGAAGTTATGTGGGACAACCTTTTCTAAAAGTACGGTCTCGGCTTTATGCAATAATTTGGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //