Array 1 45222-43734 **** Predicted by CRISPRDetect 2.4 *** >NZ_MBKW01000029.1 Streptococcus agalactiae strain NOVUI-2 NODE_3_length_322306_cov_49.4301_ID_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45221 36 100.0 30 .................................... ACGATGTTTGTGAAAGACAAAATCTTCGCT 45155 36 100.0 30 .................................... GTTGATCTTATTCACGTTTCGTGAAGTTTA 45089 36 100.0 30 .................................... CAGAAAAAATCATGGCGAGAGCCTTGCTCA 45023 36 100.0 30 .................................... ATTAATATTGGTCAGAATAAGCTATTTCAG 44957 36 100.0 30 .................................... GATATTTGGAAAGATTCTGATTTTGGTAAG 44891 36 100.0 30 .................................... TTACCGAAAGAGTGGAAAAACTACTCAGTG 44825 36 100.0 30 .................................... ATCCATTCCTACAGGAATCACTCAAAATAT 44759 36 100.0 30 .................................... AGCGGATGTCAATAGATTTCTACGAACAAG 44693 36 100.0 30 .................................... CAAGAATTATAGTAGGTTATTAAAGTTAAT 44627 36 100.0 30 .................................... CATGCTTGCTGTTGTAAATTGCCCGACTGT 44561 36 100.0 30 .................................... ATCAACTGCTAGATACGATAACACGACAAC 44495 36 100.0 30 .................................... TACCACCTGATGGATTATCAAGTGATAAAT 44429 36 100.0 30 .................................... TAACTTTAATTCGATTATGTTTTGGTTATC 44363 36 100.0 30 .................................... GTAAGTATTTTAAACGTGACTATTCCTGAA 44297 36 100.0 30 .................................... TTTTTATTATGGAAAGTAATCATTATTTTT 44231 36 100.0 30 .................................... TTCTTTAATACCTGAAATCATTGCGTTGTA 44165 36 100.0 30 .................................... TTGTAATATTTGGTAACTCTTCTTTTGTTA 44099 36 100.0 30 .................................... TCCGACCATGTCAGTCCAACGGTATTTTGT 44033 36 100.0 30 .................................... TTCTTTAATACCTGAAATCATTGCGTTGTA 43967 36 100.0 30 .................................... AGGGAGGAGAGAATCAATGCCGAATGCTGA 43901 36 100.0 30 .................................... TGGCGAAAAATGGTATTATCTCAAAGGCAA 43835 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 43769 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //