Array 1 2492-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVRP01000013.1 Aeromonas veronii strain CMF NODE_13_length_75523_cov_139.080892, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2491 28 100.0 32 ............................ TGCAGGCGGAATACATCTGTCCTTTCATCCTA 2431 28 100.0 32 ............................ GGAAATGCTGCGTTTCGGCAAAGCATCCTAAC 2371 28 100.0 32 ............................ CTGACACCCTCCGGCATACTGGCCGTCAAGGA 2311 28 100.0 32 ............................ TTGACCTCATGAGTCGGTCCATATCCATGATC 2251 28 100.0 32 ............................ TGCGCTTTGCCGTTCAGCTGCACGGACAAAAG 2191 28 100.0 32 ............................ TTCACCGCATCCTCGAATGCACTGGAGCGATG 2131 28 100.0 32 ............................ AAGCCTTTCTCCCGAGCGCCACCGTTCTTTGC 2071 28 100.0 32 ............................ ACGTCACCGGGCTGCACCTGATAAGTGGCGAT 2011 28 100.0 32 ............................ AGCGGCGGCACCGGCGATGACAGGAATAAACG 1951 28 100.0 32 ............................ CAACGGCGGCGCATCAACCAACGGCAGTCGCT 1891 28 100.0 32 ............................ TGCAGGGCGTTAACAACCATGGTCATTCCTGA 1831 28 100.0 32 ............................ ACCGGCACGAGCTGCAGCGTGCAGATCCTTGG 1771 28 100.0 32 ............................ ATCATCAGGGGGCTAGATAGTGGACATTAGAC 1711 28 100.0 32 ............................ GGTTACGGATTTTCATGATTAGCTTCCTTTCA 1651 28 100.0 32 ............................ AGCGGATTACGTGTCGTAGGGGACAGCGTAAC 1591 28 100.0 32 ............................ ATCGGCCAGCCGTTTCAGCCAGAAGCTGGTGC 1531 28 100.0 32 ............................ AAGAAACAAAAAAGAAATGTTTAAAAAAACAA 1471 28 100.0 32 ............................ TATATCGGCGGCAAGTTCGGCATCCTGGCCGG 1411 28 100.0 33 ............................ CTCAATAAGACATAGTAATGCAGCGGGTTGATT 1350 28 100.0 32 ............................ TTCTTGGGCTTGCGGTACCACATCTCGATCAC 1290 28 100.0 32 ............................ GACAGGAATAGACATAAACGGGACTCCAACAA 1230 28 100.0 32 ............................ TCGACAAATGCAGCGGATAGAGGGATGGAGAT 1170 28 100.0 32 ............................ TTAGTCATGGCTCGCTGGGCCAGCAACTCACG 1110 28 100.0 32 ............................ TGCTGATGTGCGAGTTTATGGATGACACGTCC 1050 28 100.0 32 ............................ GAGGGGACATCGAGGCCCAGAAAAGGGCGGCA 990 28 100.0 32 ............................ AAAATGGCAGGTGCCGTAAGTGAACACGCAAT 930 28 100.0 32 ............................ AAAGAAGGCCGCGCCCTCTACCAGGAGCAGAT 870 28 100.0 32 ............................ AACGAGCGATTCGCCAAGGCGATGGAAGATAT 810 28 100.0 32 ............................ ATGGGACAAATCCTCGGTGAAGTGACCATTCG 750 28 100.0 32 ............................ ATAACCATGTGGCTATTTTTGGCATTAATAAT 690 28 100.0 32 ............................ CGTAACGCCAATGGTCGAGTGGTGCGTTTCGT 630 28 100.0 32 ............................ AGATAGAGAACGGTATCGCTCTCCACGTAGTC 570 28 100.0 32 ............................ GGCGATGTGACGCTCACCGCACCGGACGGCAC 510 28 100.0 32 ............................ GCCATCTCACTGGTCCACAACATAGACAAACC 450 28 100.0 32 ............................ TTGGCGATGCGGTGCAGTTCGTAAATCTGGTT 390 28 100.0 32 ............................ ATCATCGAAACAGCCCAGTTCGAAGGGGTGAT 330 28 100.0 32 ............................ TGTCGAGCGATTACGTGGTGGAAAGCAGCTAT 270 28 100.0 32 ............................ CACTCGTCGATCAGCTGTTGATGGCTCATTGG 210 28 100.0 32 ............................ ATACAGCCCCCGAGGTAGAGGGGGGAGAACTG 150 28 100.0 32 ............................ CGCGACGCCCTGATGCAGATGTTCAAGGCTGG 90 28 100.0 32 ............................ AAGGATCTCTTCGTCGTGGATTTCCACGCCGA 30 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 42 28 100.0 32 CCTCGCAGCCGCACAGGCTGCTTAGAAA # Left flank : CTGGCTGACTTGCTTAACCTCACTGAGGTGAACTGGTTGCAAGGGATGCGTGATTATATCCATATCGGGGAGCTTGCCACGGTGCCTGAGGGAGCCTGTTTTAGGGTTGTAAGAAGGGTCAATGCCAAGAGTGCTCGTAACAAGCGCCGTCGTTCTGTGGCAAAGGGTTGGTTGACCGAAGAGGAGGCGCTGAGACGCATCCCTGATACTCAGCAGAAAGTAATGACACTTCCTTATGTCGAGATGCACAGTCTTTCCACTGGTAGCAGGATGAGGCTTTATATCGAGCACGGCCCCTTGCTCGATATGCCGGTGGCTGGTGAATTTAACGCATATGGATTAAGTGCCACGGTTACCATTCCCTGGTTCTGACCCTATTTTCAAGGGTGTAGCTAACACATTGATTCTAGCTGTGTTCTACGCCCTTGCTCGAATAGGGGGTTGTGTATAAAGCTAACCGAGTTCTTTAACAATCAATCAGATAGCACTAACGTGCAACA # Right flank : ATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCAGCCGCACAGGCTGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAACAGCCGCACAGGCTGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 18507-17638 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVRP01000091.1 Aeromonas veronii strain CMF NODE_91_length_18553_cov_158.401169, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 18506 28 100.0 32 ............................ TTATCGAGGGTCACGTTCTGCCATTGGCCGCT 18446 28 100.0 32 ............................ ACGGTGTTATGGTCAGTTTCTCGGGCGCTGGT 18386 28 100.0 32 ............................ AGGCTGCCGTTATGGCCGTGGATACTGCCGAG 18326 28 96.4 32 T........................... AGCGTACTCAAGGGCTTGGGAGTAGGCAGAAC 18266 28 100.0 32 ............................ CAGGTTGCCGCGCCGCAGACCCGCCAAGAGTA 18206 28 100.0 32 ............................ AGATGGCTCACCGGATCGGGGTCTCGATTAAT 18146 28 96.4 31 ......................A..... ACGCTCAGTATCAGTTCTGTATGTGGGTTAC 18087 28 96.4 32 ...........G................ GGAACAGGATGCCGAAGTTAACAGCCTTTTCA T [18084] 18026 28 96.4 32 .........................C.. CTATGTGTGTGTTTTGTGATCCTTGTGCTTGT 17966 28 92.9 32 .....A................A..... TGCAGTTGCTCGACCGTTCCCCCGGGCCAGCA 17906 28 92.9 32 .T.........G................ CGCCGAAGGTCGGGCGGGTCGCGGCCAGCTGG 17846 28 96.4 32 T........................... GGCAGGGGGCCGCTGGGGCGGCTTGCCGGTGA 17786 28 92.9 31 .T....................A..... AGGTGGTAGTGCAGTTGGTGTAACCCTGCTG 17727 28 89.3 32 ....A...............T.C..... AAAGGCACTGCTTGACCGGCTCTGGTACTGGG T [17724] 17666 28 92.9 0 ...........T.........C...... | T [17663] ========== ====== ====== ====== ============================ ================================ ================== 15 28 96.2 32 CCTCGCAGCCGCACAGGCTGCTTAGAAA # Left flank : CAGGCTGCTTAGAAAAAGGATCTCTTCGTCGTGGATTTCCACGCCG # Right flank : GTTACACGCCATGGTGACTAGTGAATTACGGTTGTTCTCTGCAGCCCAAGAAGGTAAAGAAAAAACGGCCACACAGGCCGTCCGAAACTTGGCCGTGGCCTCGGCCGCTATCAATAACCAATTCTGTTTCAAGAGTTCATGTAGCCTCGTTGTTTGAGTGATACAACGCCATTACTAGCAACCACCAAATGATCTAGGGTTCGGATATCAACCAGAGACAAAGCACTCTGCAGTCGCTGGGTTATTTCTATGTTTGCTCGGCTGGGTTCAGGGTGACCTGACGGGTGGTTATGCACCAGCATCAGAGCTGCAGCATTGAGCGCCAACGCACGTTTAACAACTTCCCGTGGGTAGACGGAGGCACTGCTGAGCGTGCCGCGAAATAGCTCCTCATATGCCAGGATCCGATGCTGGTTGTCCAAGAACAGCATGGCAAATACTTCATGCTCTCTGCTCTGCAACAGGGTTTGTAGTGCCTGCTGAGCCAAGTGTTTGTCTGT # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCAGCCGCACAGGCTGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAACAGCCGCACAGGCTGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //