Array 1 29949-33098 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRDQ01000046.1 Moritella viscosa isolate Vvi-11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 29949 28 100.0 32 ............................ TAGAAACAAAGTCGCAAGAGATCGCAAATGTC 30009 28 100.0 32 ............................ ACGATAAAGGTTACAGTCTGATCCGTGGCAAA 30069 28 100.0 32 ............................ TACCTAACAAACCATATTGCGCCCACGATAAA 30129 28 100.0 32 ............................ TTGGCCGTAAGGATCACTGGCGACCAGTCCAA 30189 28 100.0 32 ............................ TGTACTTAATGGCAAAGAAACATAACCAGCCT 30249 28 100.0 33 ............................ TAGCGATAGATAGGGCAATGCCTTTGATCTCAT 30310 28 100.0 32 ............................ ATGAAGTAATGCCGACACTCGCTGGATTGTCA 30370 28 100.0 32 ............................ CTATTGATGATTTTGAACAAGCCATAACTAAC 30430 28 100.0 32 ............................ AGCGACCGTAGCTTATGAAGATCATGACTACA 30490 28 100.0 33 ............................ CACTTTAGAGAAAATTATATGTCACCAATTAAT 30551 28 100.0 32 ............................ TAGTCGATATATTGGTGTATATACGTGTGCAT 30611 28 100.0 32 ............................ GCAGCGGGTGGCGCTTCAAAAATGATGCAAGG 30671 28 100.0 32 ............................ AAACAAACCTAATAACAAAATGAAAACGTAAA 30731 28 100.0 32 ............................ TCCAGAGCCACCACCTGAGCCACCGCCAGTAC 30791 28 100.0 32 ............................ AGATAAGAAACCATCGTGGATAAGAGAGCAAG 30851 28 100.0 32 ............................ TGATACTGGAGCAGGGATTGGTTATATTGATG 30911 28 100.0 32 ............................ TCAACAATAGAACCGCAGACCTGATACTGGAG 30971 28 100.0 32 ............................ GTAACCAGACCTGATACAGCCGCGATTTCATC 31031 28 100.0 32 ............................ TGTAGAGGTACCGCAAAAACCTTCTGAGTATG 31091 28 100.0 32 ............................ TGTAAACGTATTTACGCGACATTTCCCTAATT 31151 28 100.0 32 ............................ GTGTAGGTGAAACATTAGCAAACACATGCTTA 31211 28 100.0 32 ............................ ACCCGCAAGCTGTTGAAGCTGAGATTTAGAAA 31271 28 100.0 32 ............................ TACTGGCATCGCTGCGGCTATTGCGGCTGGTC 31331 28 100.0 32 ............................ CTGAAAATTTCGACTCTACTTGTGCTGAAAAA 31391 28 100.0 32 ............................ TGATAATTCGATTAGATCATCAATTTTATAAC 31451 28 100.0 32 ............................ ACTTCTTCTGGGTTCTTCCTCGCAAATGTCTG 31511 28 100.0 32 ............................ CAAAACATTTCGCCCCCCCTGCACACTCTGCT 31571 28 100.0 32 ............................ CGACAAAATGGAGCGCACCGGCCTGTTTACGC 31631 28 100.0 32 ............................ TTTCGATAAATTATCCTCAGCCCATAATGGTT 31691 28 100.0 32 ............................ TGATAGGAAACGATATCGAGGTTTTGAATTAT 31751 28 100.0 32 ............................ AATGGTAAGAAAACCGTCACCAAAATTACTAT 31811 28 100.0 32 ............................ ATGAATCTTTCGGCGTTTCATATTTCTTTAAT 31871 28 100.0 32 ............................ GGTAAAGGAACTTTTGATGGCATTTACGATAA 31931 28 100.0 32 ............................ CATATGTACAAATCAGCGTTCTCGCTGTGAGC 31991 28 100.0 32 ............................ AAGATGCGGCTGGCATCGGATTTGGCCCTCGC 32051 28 100.0 32 ............................ AGCAAGAGCAAACTCTTTAGCAAGCGCATTTG 32111 28 100.0 32 ............................ CCACAGCGCATGGATTGTTAATGATGCAGCGT 32171 28 100.0 32 ............................ ACCCCCTGTTACAGTGTAAGCCTTTGAAGATG 32231 28 100.0 32 ............................ TCTTACCCTGCTCGTCTTTTATGCCGTCACCG 32291 28 100.0 32 ............................ GCTAATGGCCTAAGTGCTGAGAAAATTATCAA 32351 28 100.0 32 ............................ AACACTCGCACCGCAAGTAGCGCCAAGACCCG 32411 28 100.0 32 ............................ AACAGCAACAAGTTCATTAACAAGTTTGTCAC 32471 28 100.0 32 ............................ ACTATAGTTACAGCAGATTTCACACACAAAAC 32531 28 100.0 32 ............................ CGCAGCGAGAGGGCCCCCGGGCGGAGTACCTA 32591 28 100.0 32 ............................ TATCGTAAAAGTCACGAGGGAAATAAGTCATG 32651 28 100.0 32 ............................ ACCGCGAATCGTGGTCAATAGCTCTTTTGCTT 32711 28 100.0 32 ............................ TCAGGAAGGAAATTAATATGATTTTTAATGTT 32771 28 100.0 32 ............................ TAAAGATCATAAAGCAAATATTGAAATTAAAA 32831 28 100.0 32 ............................ TATACAAGGTTGCTGTAAACAAATCATCCACA 32891 28 100.0 32 ............................ ATTTGACGATTGTCTTGCTTTGAAACTTGTTT 32951 28 100.0 32 ............................ ACAAGGTTTACCGTCACGGTCGAACCCGTCAC 33011 28 96.4 32 ...T........................ TGATGGCGTTGCGTGTGTGTAATCATCAACAA 33071 28 89.3 0 ...........A.T...........T.. | ========== ====== ====== ====== ============================ ================================= ================== 53 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTAAATAAGTTGTTTGAATTAAATTGGCTTAAAGGTTTACGTGATTATTGTACTCAAACATACATTTCATTGGTGCCAGAGAGTTGCCAGTATTGTAGTGTAAAGCGTAAACAAGCTAAAAGTGCTAACAACAAACGTAAACGCTCTATCGCTAAAGGTTGGTTAAATGCTGAAGAGGCAGCATTAAAAATTGGCAATGAGCAGCAAAAAATACTGCGCTTACCGTTTGTTCAATTAAAAAGTACATCTACAGGGCAGGTGATGAAGTTATTCATTGAGCATAGCGTATTGCAAGATGAAGCAGTTGAAGGGACGTTTAATAGCTATGGGTTAAGCTCATCGGCAACAGTTCCTTGGTTTTAACAAAAAATAACCCAAAAACTGTTCTTTAAAAACGAGTCAATGAAATCAGTGGGTTACAATAGGTATAAAAATTAGGTAAAAATAGATATTTTTGCTTATCTGCTTGTTGTAACTTATTTTTATACTGATATTCTATT # Right flank : ATTGTATATTGTTATGAACATATTCAATCCATTTTTCTGAGTTCTATTAACTGGTTTGATTGGCGCTATTCTTGCGTTCCCTATTTATAATATAATCGGTATTAGCTCAAGCAATTGCTAATGCAGTTGTTGATGAGGTCACTGCTAGTGCGGAAGTTAGCGTGACAGGTGGGAGTTCAAAGGGACTGTATAAGGTAAGTTAAAAGACAGTGTAAACTATCGCCACTCTATCGCCACCTTTAATTTGATCGCCTTTAAGTTGTTGATTTTAAATTGGTTTAATTTGTATTTATATTGAAACCGGTAATATAAACAGTGAAGGGCACTACACTTGGATAGATATTGAATTAGCTTAATTTATCGTGTTGTAACTAACTTGTTCTAACTCAGTTATCGGATACAAGTGAGTTACAACTTAAGCTTCAAAGCTGTCGGTTAGAATGACTGAAGTATGGAAAAATTAACACCGCCAGAACGAACAAAAGTAAACTGTTTACAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //