Array 1 25667-24860 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACWAP010000008.1 Vibrio cholerae strain H1(2020) NODE_8_length_166966_cov_19.2806, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     25666	    28	  96.4	    32	...........C................	TGCTCAAGCGCGATAGTGGTTCGGCTTGAGTC	
     25606	    28	  96.4	    32	...........C................	TGTCTTAGCATGTGGTTTTTTAGTTACCCATC	
     25546	    28	  96.4	    32	...........C................	CTCTGATATTTCTAAGAAACCGTCTCTTTTAA	
     25486	    28	  96.4	    32	...........C................	CACTGCCCACCAACAACGTGGTAATACTTCTC	
     25426	    28	  96.4	    32	...........C................	AGACATTGAAAATCGCATCATCGAAAGAGTCA	
     25366	    28	 100.0	    31	............................	TGGACGCCTATGTTATCGACTTTAAAAAGAC 	
     25307	    28	 100.0	    32	............................	CTGACCTGTTTCTGATTGAATGAATGAACCGC	
     25247	    28	 100.0	    32	............................	GTTAATTTTGAACTCGCAGATCTGAAAGCTCT	
     25187	    28	 100.0	    32	............................	GGTTTGGCCATGATGTCACCCGTCATTGCGTG	
     25127	    28	 100.0	    32	............................	AAAATCACCCGCGCATGGGAAACCGTCACCGG	
     25067	    28	 100.0	    32	............................	ATGCCAAAAGGCTTTTCTTCCTTTCAGAACAA	
     25007	    28	 100.0	    32	............................	TTTCGACCGTGATATACTCAAAACACGAAAAT	
     24947	    28	 100.0	    32	............................	ATTGAGATACTGTAACGCCGCACCATCCCCGC	
     24887	    28	  92.9	     0	.........................TT.	|                               	
==========	======	======	======	============================	================================	==================
        14	    28	  98.2	    32	GTTCACTGCCGTACAGGCAGCTTAGAAA	                                	       

# Left flank :   ATGTAACTTACGTCAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGCACTATGGGCTGCAAAATCCGGCAAACCGCTGGTGGAATGTTTAGCGGATTTGCAACAAAGCAAGCCGACAGCGTTGTGCACCTTGCCCTTTATTTACTTGCATAGCCAGCAAACCAAGCTGCGAACCCCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTTGATTGCTACGGCTTGAGTAGCAAAGCGAATGGACAGTCAATGTTGGCGACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTAATTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCCTTTAAAACAAATAGTTACAACGGGTTGTTTGTAACAAGGTAAAAAGAAGATTTTTATCCTAACAGCCTGTTGCAGCTTATTTTTATCGGTTTATTCTATTG
# Right flank :  GAAAGTAAATCAAACGAGGCAGTTCACTTTCTAGATTACGTTAAGGTTCTTACGTTCTGCTACGCATGTTTATTAGGGTTTTCTTAAATGGTCTTTTCACAAGCATTAGTGACAAATTTCCGAGGTGTAATGATTAAGATAGCCCAACTGATGAGTATCAGTTGAGGGGTAGTCGCCATGAGCATTGTTGGTTGTGTTAATATCAGATCCAAGCATATCGATCGAACATGTCAGATGGTCTCGTAAGTCAAATTTTACTCAGAGCGAGTTTTGCGTCAATAAAAATCCTTTTAAAATCATAAAGTAATGAGCTATTGGATTACATCAGTTTCCATGTCTTAAGTGGAGGTTATATTCTAGATTATTTTCAATTGCCGAGTACCAGTCACAGATAGGCTACCTTTGGCGGCCTCTTCTATATGTCCGCTCCACCAGCTCATCATTGGCTTTCTGCGTTCTAAGTAGTCAGTGCGGTTATAGGCACTGCGTACCTGGTTATC

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   GTTCACTGCCGCACAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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