Array 1 28509-26101 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZJK01000038.1 Streptomyces avermitilis MA-4680 = NBRC 14893 strain MA-4680 3288, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 28508 29 100.0 32 ............................. CGGCGGCAGCAGCAGCCGAGCGGGCCGTGAGC 28447 29 100.0 32 ............................. CGGTCCGTAACTGGCAGAAGCGTTGCTCGGTG 28386 29 100.0 32 ............................. CCTGTACTACGCAGGCTGGAATGCGGGCATCG 28325 29 100.0 32 ............................. GAGCTCCCGTGAATGCTACCGCTTTAGCACCT 28264 29 100.0 32 ............................. CGGACACCACCAACGTCCACGGCATCGCGAAC 28203 29 100.0 32 ............................. ACGGCCATCACCCTGATCTGGGTCACCGTCTC 28142 29 100.0 32 ............................. CTGAACATCTCCAACTGGCAGTCGCAGATCGA 28081 29 100.0 32 ............................. CTGGGCGATCTGCTGCTCTAGGTCCGGTACAG 28020 29 100.0 32 ............................. GTCCACCGGCAGGACCGTGCACGGGATGGATG 27959 29 100.0 32 ............................. TCGCTGCCCGCGTTGAGCTCGGCCGTCGTCGG 27898 29 100.0 32 ............................. CCACCGAAGCCCTTGGCGCTGGCCAGCTTGGC 27837 29 100.0 32 ............................. GCTTCGGCGTCGACACCTACCGCCTGTCGACC 27776 29 100.0 32 ............................. GCTTCAGGTCTCGGCCAGACCACACTGTCGGT 27715 29 100.0 32 ............................. CACTGTCCGAGCCCCTCGCGAGCTGAAGCGGG 27654 29 100.0 32 ............................. TCGTCACGGACCTTCTTTGCGTGGCGGCTGGC 27593 29 100.0 32 ............................. TCGATGAAATTGGTTCCGCCCGTTACCGAGAC 27532 29 100.0 32 ............................. GTCGACCCGCGAGGCTTCGGCATGGACTGGCT 27471 29 100.0 32 ............................. TCCCCGTTCTTGTCTAGCCAGCCCTCACTGTC 27410 29 100.0 32 ............................. ATCTGCGAGCCCTCGACGGAGCAGCGGCCCAT 27349 29 100.0 32 ............................. GTCGACCCGCGAGGCTTCGGCATGGACTGGCT 27288 29 100.0 32 ............................. TTGGCGGGCGGCTTCGGTGCGGAGGTCTTCGT 27227 29 100.0 32 ............................. CTCGCAGCTACACGGCGGGGCCCGAAACGGGA 27166 29 100.0 32 ............................. TCGAGGGCGGCCATGCGCTGGAGGTGCCAGGG 27105 29 100.0 32 ............................. TTCGGGTTCCGGCCGAGGCTCTGGTGCCAGTA 27044 29 100.0 32 ............................. ACGCACCAGCTTCTCGTGCGGCCGGACACCCC 26983 29 100.0 32 ............................. TGCAGGACGGCTTGCTCGACGAGGAAGCGGTC 26922 29 100.0 32 ............................. TGGGGCTCCGTCTCCAGGGACGACAACGGCCA 26861 29 100.0 32 ............................. CTCGCCGACGGCTTCGAGGTCTCGGTGCCGCA 26800 29 100.0 32 ............................. CCGGCGCGCTGGCGTTCCTGCAAGACGAGAAG 26739 29 100.0 32 ............................. ACGGAGCTGCGGGCAGAGCTGACAGCGACGAA 26678 29 100.0 32 ............................. TGGGTGATGCTCTCGTCGATGCCGAGGATGAG 26617 29 100.0 32 ............................. CCGTTCCCCTGGATCCAGCGCGGTGAGGTCCA 26556 29 100.0 32 ............................. ACGGTCGGCCAGCAGTTGCGGCGCGACCCGTT 26495 29 100.0 32 ............................. CCGAGGAAGCCGAAGGCGCCGACTTCGCCATG 26434 29 96.6 32 ..G.......................... GCCGTCACCACCACGAACCGGAAGCTCACTTC 26373 29 96.6 32 ..G.......................... TAGTCCCGCCTCCAGGCCCCGCCCTGAGCCGC 26312 29 93.1 32 ..G..............A........... TAGTGCGTGCCAGTCGACACCGAACTCAGGGT 26251 29 93.1 32 ..G......................A... CGCCGCGCCGTGGCTTCTTCGTTCGGCCGGCC 26190 29 86.2 32 ..G..........A......A..T..... TGCTTCCCGATCAGCGAGGGCGGGAAGCGGGC 26129 29 86.2 0 ..G................G...A.T... | ========== ====== ====== ====== ============================= ================================ ================== 40 29 98.8 32 GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Left flank : CCCGCGCATCGTCGGCGACATCCAGGAGCTCCTCGGCCTCGGCTCCGCCTACGACATCCCCGATCCGGAAGAACAGCTCGTCGATCTATGGGACCCCATTTCCGGACCAGTCCCCGGTGGCATGAACCACGGGACGGATACATGACCACACAGAAGAGGGAACACACTCAGTGGCCTCAATGATCGTGCTCTCCGCCACCGCCGTCCCCGACCACCTCCGCGGAGCACTCACACGCTGGTTGTTGGAAGCCACCCCAGAGCTGTACATCGGAACCGTGTCCGCCCGTGTCCGCGACGAATTATGGACTGCGGTCGCCGCATGCACTGGTGACGGCATGTCGGTCCTTGCCTACCCCAGCGACAACGAGCAAGGCTTCGAGCTCCGCACTGCAGGATCCCGCCGCCGCCACCCCGTCGAATTCGACGGCCTCACCCTGATCGCCTTCAATCGAGAAGATAAAGAAAAGGCAAACCCCCTGTAGAAACGCAGGTCAGGAAGG # Right flank : ATGGCCAAGGGCGCCGAAGAGATCCGCGGCAAGTCGTCCCCGCGCCCACAGGGGCAGCTCCGCCAGGGACGCCATCGGCCGGGCTGGCAGTCCTCATGCCGCTGCCTGGCGGTGTCCTCCACTCGAAGGTCATGCGCTCATCTGCCCAAGTTGCAAGGCAGTTGATGCCTCTAGTGGCGTCGGACATCGACGTAGCGACCTCGCTTACGCCGCGTCAACCGACACCCCGCCTGCGGCCGGCCGCAGGCGGACAGCGTGCAGTTCGCCCAAGCGCCAGCGAAGGAGGAACTCGACGGTACGGCGGCCCGCCGCGTCTGCAGCCTCTTCCGCACCGCGGCCGCGGTGCCGCAGGCACGCCTCATACGCGGCGTCGGCCTCGACCACCACATCCTCCGCCCCCAGCAGCCGGCGCAGCGCCGCCGCGCGCCGTTCGTCCCGGATCTGTTGCGCCACCTGCGGCGCGTAGAACGCGACCAGAGCCGGATCGGCGTCCGGACCGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 38204-41835 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZJK01000038.1 Streptomyces avermitilis MA-4680 = NBRC 14893 strain MA-4680 3288, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 38204 30 96.7 31 .............................A CACGGCTGTTGAGCCGGACGGCGCCGAGACC 38265 30 100.0 31 .............................. CCCGATCGAGGGCGGTGTGAGCATGAGTATC 38326 30 96.7 31 .............................A CGTCGTGGGACTGGTTGGCCGCCGCGTTGAA 38387 30 96.7 31 .............................C AGGTCGCCAGCCGCTGCCCGGTGTCGCAGTC 38448 30 96.7 31 .............................C CCCATGATGATTTGGCCAGGCACCCGAACCA 38509 30 93.3 31 ............................CC ACTAACTCAAGACGCAATGATCACAATCGGA 38570 30 100.0 31 .............................. CGATGATGCCGGCGTCGACGGCGATGGGGAA 38631 30 96.7 31 .............................T CGTTGAAGCTCATGCCGGTGCGCTTCTCCAG 38692 30 96.7 31 .............................C CGCCCGCGCCGCACTCATCCCCGACCAGGCG 38753 30 96.7 31 .............................C CCGTGAGCAGCCGACGTTCGGTGACCGGGGG 38814 30 96.7 31 .............................C CGTCGATGAGCGCCTAGCCTTGCTGGAACGA 38875 30 96.7 31 .............................T CCATGCAGCACCGCGGCGACCGCCACCCCCC 38936 30 96.7 31 .............................T TGGGGCAGTAGGTCAGCGAGGATGCCGAGCC 38997 30 100.0 31 .............................. AGAACTACGACGAGATGGCCAAGAAGACCGT 39058 30 96.7 31 .............................A ACGACACGGCCGCCTTCAGCCCGCCCCAGAC 39119 30 96.7 31 .............................C CGCCCGCACCACTGACGTGCGACGAGTGCGG 39180 30 100.0 31 .............................. CGCGCGGGTCCAACGTCCAGGTCGTCCTCAC 39241 30 96.7 31 .............................T CCACCACGCGCTCCAGGAAGCTGGTCCCCTC 39302 30 96.7 31 ............................T. GGTGTTCGTCGGCATCCCGGTGCTCGTCGTC 39363 30 96.7 31 .............................C TCGGCAAGTCCGGCGCCGACGCCCTCTACGA 39424 30 96.7 31 .............................C GCAGCGTCGGGTGCTGCCGCTTCATCAGGAC 39485 30 96.7 31 .............................C AAGCGCGGTGTACACGATGTGGGGGTGGATC 39546 30 100.0 31 .............................. TCCGCGCGGACCCGGGCGTCGGTGTCGACGC 39607 30 96.7 31 .............................C AGTTCGGCAGCCTCCTCGGCGACATCTTCGG 39668 30 96.7 31 .............................T GTGACGCCTGCCCCATCGCCAACGCGACGCC 39729 30 93.3 31 ............................TT CTTCGCCCCGGCCGTCCCCGCCGCCGCCTTC 39790 30 100.0 31 .............................. CCCGCACCTGCAGACGTACGTCCAGTCCAAC 39851 30 96.7 31 .............................T CCTGGGACGCCCTCAAGGTCCCGAACGTCTG 39912 30 100.0 31 .............................. TGGGGGAGGCTGCGGAGGCGCAGACCACGTT 39973 30 96.7 31 .............................T ACGCGTGGGGCGGCATCCTGGTGCGCACCTC 40034 30 100.0 31 .............................. CTGCCATCGAGTCATCCCCTGCGACCCCGGG 40095 30 96.7 31 ..T........................... TTTCGTACCCGAGGGCCGGGCCGATGATGGT 40156 30 100.0 31 .............................. ACATGATCGCAGCCCGATTCCTGCGGCAGGA 40217 30 96.7 31 .............................T CCACGGACGGCAACTGATCCCCGGCATGAAC 40278 30 100.0 31 .............................. TCAACCGCGCGTTCGGCCGCAGCCGGCTGGT 40339 30 96.7 31 .............................C CTGACCGGCTGGCGTTCCAGGCGACGTCGAC 40400 30 96.7 31 .............................T ACGCCATCGCCTGGCGTAACGCGCTCCTCAC 40461 30 96.7 31 .............................A CCGTCACGTTCGACACGCGGGTCGGGTTGTA 40522 30 93.3 31 ............T..A.............. ACATCCACGGCAACCCGCTGAAGCTGACCCG 40583 30 96.7 31 .............................A AAACCGGGCGCGCCGTGCAACCTGACGGCCC 40644 30 96.7 31 .............................A TCAGCAGCATCGCCAAGGCCATCGTGGCGGG 40705 30 100.0 31 .............................. AGCCGGAGGCCCGGCAGACCGCCGTCGCCGA 40766 30 96.7 33 .............................T CCGCCCGAAGAAGGACCGCAGTACCGCCCCGTA 40829 30 100.0 31 .............................. CCCTCAACAGGCCGTCAACCGAGCACGCCAA 40890 30 96.7 31 .............................A CGGACAAGGGCATCACCGTCCTTTTCACCTC 40951 30 100.0 31 .............................. AGACCCTTGCGAAGACCAGGCGTGCCAGTGC 41012 30 96.7 31 .............................T CGCGGTGCCGCCACAGCGACGGTCGGGCGCC 41073 30 93.3 31 ............T................C TGATGCTCGACATCGCGAAGGGCATGCAGGC 41134 30 100.0 31 .............................. CCGAGAACGAGCGGCTGAAGGCGGCGAAGCC 41195 30 100.0 31 .............................. CCATGGAGTAGCCCTGCTTGAAGGCGTCGTA 41256 30 96.7 31 .............................T CGGACACCGAGGTCAGCGCGTGGCTGCTGTC 41317 30 96.7 31 .............................C CACCGGGGACGTAGCCGACGTCCGCCGCCCC 41378 30 93.3 31 ............T................T CGGAGCTGGCCAGGGAGCTGACCACCCGGGT 41439 30 93.3 31 ..........T..................C TTCCAGGTCAGCGGGAACTGGCCAAGGCTGA 41500 30 90.0 31 ...........A.......T.........A AGCCGGAGACCGAGCAGCAGGACCAGCCTCA 41561 30 93.3 32 .............C...............T ACTGGATCTTCCCCGTCCGTGACGAGCACGGG 41623 30 93.3 31 ......C......................C CATGGTGATCTACCACAGCGAACTTGCGGGC 41684 30 100.0 31 .............................. TCCGCCTCGACGGTCTGCACCGGGCGAAGAT 41745 30 93.3 31 ...T.........................T ACCCGGTTCAGTGAAGGTCAGCTGGGGCCGT 41806 30 93.3 0 ......................C......A | ========== ====== ====== ====== ============================== ================================= ================== 60 30 96.9 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : TCGTTCCGTACGGCCGCGAACGCCTCCGGAACCTGGGCCTGAAACGGAGGAGTGATCTTCCCCAGATCGTGCAACCCCGCCCAGAACGCCAGCACCCGCCGAGCCTCGGCCACCGTCAGCCCCAGCGCCCGTGCGACCTTCTCACGCATTTGATCACTCAGCAGCACATCCCACAGGGCACCGAACACTCCCGCGGTGTCCAGCAGATGGCAGAGCACTGGGTACGGGCGCGGAAGACCATGCTCCTTGCCCCAAAACCGGGTGTCGACCGGGACATGTCCCGGCGAGACGGACTCACGCTTCATCATGACAGCCATGCATAACAGCCCCCACTGACAACGCATCCTCACCTGCACGGATACCAGAACAGATCCCAAGCAGGGCCGTAGAATCCAAGCCGTGGAACCTCAGCCGACGCGCGGGCAGACCAATTCAAGGCGAGTCCATTCGGATACCGTAAAGAACTCGCAAAGCACCTGAAGGAGGCCAGGTCAGGAAGG # Right flank : ACGAAGACGCTTGTCGGCGACGCTTGAAATGTGGCTCAGTCAAGATTTCCGTGAAGCCGATCGTGCGCCTGTGCGCCGGTGACGCTCCGTCACAGGCCGCGTGATACTCGCCGAGTGTGGGGAGCTGCTGAAGACCATGTTTCCGCACCTCGAAGGGGTGCTGGTGGAAGAAGTGAGCCCCGAGGGTGGGGTGTTGCACATTGTGGCAAGAACCGTGGAGTCGGTTCCGGTGCCGTGCCCGGACTGCGCAACGCCCTCGGTGCGACGGCACAGCGGATACCAGCGCCGTCTCGCCGACGGTGCGGTCGGCGGCCGTCAGGTGTCCATCGAGCTGACCGTCCGCCGCCTGTTCTGCGACGACCAGAGATGTGCACGGGTGACCTTTGCCGAGCAGGTCGACGGGCTGACCGTGCGGTATGGGCGTCGGACGCCGCAGCTGCGGTGCTTGTTGAGCGCGATCGCGGTGGCCCTGGCCGGCCGGGCCGGAGAGCGCCTCGCGG # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1780-2114 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZJK01000047.1 Streptomyces avermitilis MA-4680 = NBRC 14893 strain MA-4680 3334, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1780 30 100.0 31 .............................. ACGCCGACCGAACCGTCATGCTGACCGTGGA 1841 30 100.0 31 .............................. CCACCGTGGATATCAAGCTGGCCGAGCGGAA 1902 30 96.7 31 .............................T GGCGCCAGCCGATGGCCGTGCGCTCACCGTC 1963 30 100.0 31 .............................. ACGGGGACACGCTTCGCGTGATGCTGGACCA 2024 30 100.0 31 .............................. CGGACAACGAGGTGCGGGACGGGATCCGGTC 2085 30 93.3 0 .....................A.......A | ========== ====== ====== ====== ============================== =============================== ================== 6 30 98.3 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : GGCCCGGCCGGCCAGGGCCACCGCGATCGCGCTCAACAAGCACCGCAGCTGCGGCGTCCGACGCCCATACCGCACGGTCAGCCCGTCGACCTGCTCGGCAAAGGTCACCCGTGCACATCTCTGGTCGTCGCAGAACAGGCGGCGGACGGTCAGCTCGATGGACACCTGACGGCCGCCGACCGCACCGTCGGCGAGACGGCGCTGGTATCCGCTGTGCCGTCGCACCGAGGGCGTTGCGCAGTCCGGGCACGGCACCGGAACCGACTCCACGGTTCTTGCCACAATGTGCAACACCCCACCCTCGGGGCTCACTTCTTCCACCAGCACCCCTTCGAGGTGCGGAAACATGGTCTTCAGCAGCTCCCCACACTCGGCGAGTATCACGCGGCCTGTGACGGAGCGTCACCGGCGCACAGGCGCACGATCGGCTTCACGGAAATCTTGACTGAGCCACTTTTCAGCCGTCGCCGACAGACGCTGGCACTCGGGACTGAGACGGG # Right flank : ACCGGCCAGGAAGCAGAGGGTGATGACATTCGGTTCGGTCCTCGCCACCATGGCCGTGCTCGCGGTGGCCGCCGCACCGAACCTGTACGCGACCAGCACAACGAGCCACGCCGCCTTGGCCCAGGCGTAGGGCGTCTCGAAGACGACCATGGGCCGCGCGATCCGGCGCGAGAACTGGAAGCACGTGGACTGATCCGCTCATGGCCAAGTCGTCTTTCGTGGGCGCTGGTAGTCCACGGAGTACACCCGGGACGGACGCGAGAGCCGGCCTGGGTTGACGGTGGTCAGGAACAGGTCGGCCAGGGGCAGGCCGGTGAGGCCGGAGCTGTAGAGCAGGGTTGGGTCCGGCATCTCCATCTCGACGCCCTGAGGTCGGACGGCACCTGCGGGAACTGCGCGAGGACGTGCGCCGGGCGGGCGGGGCGCGTGCGGCGGCCGACGCGGTGGAGCGTCTGCTGACGCGCCGGCAGGCCGGGGAGGCTCAGCCGCTGGGCGGAGTC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //