Array 1 2988-3325 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAADHO010000015.1 Desulfoluna butyratoxydans isolate Desulfoluna butyratoxydans MSL71, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2988 37 100.0 38 ..................................... AACAGTTGTTATGAGGCTTTCCGAACTACAGGCTAACC 3063 37 100.0 40 ..................................... TTTTCTCTACGTTATTAGCTGTTGCCGCCATCAGAAATGT 3140 37 100.0 36 ..................................... GTCAAAAAGGGTGCGGCGTTCGGCCGCGGGGCATGG 3213 37 100.0 39 ..................................... AACGTCGCATACACGACGTAAAGGGCACCCCAAGAGTTG 3289 37 86.5 0 ..................CC...........C..C.A | ========== ====== ====== ====== ===================================== ======================================== ================== 5 37 97.3 38 GTCTGAAACACTGACCCGATTACGAGGGGATTAAGAC # Left flank : ACCTCACCTTCGATAGGTTTGGAGCGTTTTTTTGCAACTAAAGGGGTGGGTGCAACAGGGGGATGGAAGCCCGTTGTTACTGGGGCTTCGTCGGTTTTAAAGGAATGCCACGTTTGCAGCGCTTCGCAGAACTTCGCATTGAAAAGGGATAGCCTGTGGCATGTGGCCGTAATCATTTTGAACTTGATTTACTGCATAATATATGGTGGATTCACCATTGAAAGCCTTCTTCGCAGTCATGAGTCATATGGTTACCACGATGGCCCGAGGCCATGTTTTTTGTGAAGAGGCCCTGATACCAGGAGTTGCCCTTGATTTTTTTTGGACGACTGAAAAGACGCTAGTTTATCCGGTTTTGGTATGGTTCTGATTTTTAAGGTGAATCATATGAAATTCGGTCCCAGAAAATTTTCAAGAATAGTCAAAAGTGAGTCAACCTTCGGAGGTTATCCTTTTTGGCTTCTGGGGGCCTTGACAGCCAAGGCTTTGAGAGTGGTACT # Right flank : AGAAAAAGCCCGTTCTGATGAGCGGGCTTTTTATTTTCCGTGGATTGGCCGGTCCTGTGGGTTCATTTTTAATGCTTCGCAGTACTTGGCATTGGAGAGGGATAGCCTGTGGCATGTGGCCGTAATCATTTTGAACTTGATTTACTGCATAATATATGGTGGATTCACCATTGAAAGCCTTCTTCGCAGTCATGAGTCATATGGTTACCACGATGGCCCGAGGCCATGTTTTTTGTGAAGAGGCCCTGATACCAGGCGTTGCCCTAGATTTTTTTTGGACGACTGAAAAGACGCTAGTTTATCCGGTTTTGGTATGGTTCTGATTTTTATGGTGAATCATATGAAATTCGGTTCCAGAAAATTTTCAAGAATAGTTAAAAGTGAGTCAACCTTCGGAGGTTATCCTTTTTGGCTTTTGGGGGCCTTGACAGCCAAGGATTTGAGAGGGGTACTGTCTGAAACACTGACCCGATTACGAGGGGATTAAGACCAGCAGCCGG # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACACTGACCCGATTACGAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 3778-4480 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAADHO010000015.1 Desulfoluna butyratoxydans isolate Desulfoluna butyratoxydans MSL71, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 3778 37 100.0 35 ..................................... CAGCAGCCGGCGGGGACGGGGTTGCGGTTTGTGTA 3850 37 100.0 36 ..................................... CTTGGGGCATAGCCCCTGAAAAAATTTTTGAAGAAA 3923 37 100.0 39 ..................................... ATGCATGAATCCCAAACGTGAATTCCAAGAACAATGGGG 3999 37 100.0 35 ..................................... TTTGATAATTTCTGACAAAGATTTTTCTTCAACGT 4071 37 100.0 39 ..................................... TCCGTCCAAGAAAAAGATTCGGGGAGGATTAGCCAAAGC 4147 37 100.0 37 ..................................... GCGTGAGCGCTGGCGGCATCGGTGAGGTCTTTTTTCA 4221 37 100.0 37 ..................................... GGGCTCCAAAACCGGGTTCCTTACCGGGAGATCCTGC 4295 37 100.0 36 ..................................... GTTTTGTCTTCGCAGAGCACGGGCATTGCAGTTCTT 4368 37 97.3 39 ......................G.............. TGTTGCAATATTTTCGGAGCTGCATTGAAATTCTTGAGC 4444 37 91.9 0 ...............................C..A.A | ========== ====== ====== ====== ===================================== ======================================= ================== 10 37 98.9 37 GTCTGAAACACTGACCCGATTACGAGGGGATTAAGAC # Left flank : CCCAAGAGTTGGTCTGAAACACTGACCCGCCTACGAGGGGATCAACAAGAAAAAGCCCGTTCTGATGAGCGGGCTTTTTATTTTCCGTGGATTGGCCGGTCCTGTGGGTTCATTTTTAATGCTTCGCAGTACTTGGCATTGGAGAGGGATAGCCTGTGGCATGTGGCCGTAATCATTTTGAACTTGATTTACTGCATAATATATGGTGGATTCACCATTGAAAGCCTTCTTCGCAGTCATGAGTCATATGGTTACCACGATGGCCCGAGGCCATGTTTTTTGTGAAGAGGCCCTGATACCAGGCGTTGCCCTAGATTTTTTTTGGACGACTGAAAAGACGCTAGTTTATCCGGTTTTGGTATGGTTCTGATTTTTATGGTGAATCATATGAAATTCGGTTCCAGAAAATTTTCAAGAATAGTTAAAAGTGAGTCAACCTTCGGAGGTTATCCTTTTTGGCTTTTGGGGGCCTTGACAGCCAAGGATTTGAGAGGGGTACT # Right flank : AGAAAAAGCCCGTTCTGATGAACGGGCTTTTTCTCTGCCGTGAATCCTTGGGCCTGCAGGCCACTCAACTTTTTCCTTGACCTTCCACTCAACTTTTTGGCACGCTTTAATCACCAACAAGGGGTGCCTCCCCTTCACAATTCTGTCTCAAAGCAGGATGGTGAGAATGAGCGCCAGATTTCTCTACGCCTGTGGTGTATCCACGCCTCAGGTGTCAGAAGGAGCGGCACACTGTCCGGTATCCGTGAGGACCGGGAGCCCTTGTTGGTAGGGTTTTTGAGCAGTGTGTCGCTTCTTTTGTTTTGCGGAGGAGGCGCAGCTTTTACCTTTCATCAAAAAAATACCAACGAGGCCCACCATGACCACCAACCGCATGACCCATTTTGCCAATCTGTCGAATTGTGTTTCTGAAATCGTTCTGACCCAGGCTGCCCTGGAGGCCCTGGCCGACCGGCTTGCCCATGAGTTGCCGGGTGAGTCGCAGATTCTGAACGTCCTTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACACTGACCCGATTACGAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 921009-920444 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAADHO010000001.1 Desulfoluna butyratoxydans isolate Desulfoluna butyratoxydans MSL71, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 921008 32 100.0 33 ................................ TGGATCTTGGACTTGACGGTTTTCTTGGGTTCG 920943 32 100.0 35 ................................ AAAAAAGCTGGGCGGCGCATCGAAAAAGCTACCAA 920876 32 100.0 35 ................................ AAGGGATACCTTCCCCGCTTCGGTCAAAAGGGCCT 920809 32 100.0 33 ................................ CGTTACGGTCCTCTCCTTGGGGTAAAACTCCCT 920744 32 100.0 37 ................................ TGAACTCGATGTCGAAGTAGCAAACCTGGAGCAGGCG 920675 32 100.0 35 ................................ ATACGACGACTCGCTCACGATGCCGTTGTCGATGT 920608 32 100.0 34 ................................ AGGATGGGACCGGGCGCATCAGTTACTTTTGCTT 920542 32 96.9 34 ............................C... ATTATCTTCGTGACGATGGATACGAAGATGGCGG 920476 32 90.6 0 .........T...................A.T | G [920447] ========== ====== ====== ====== ================================ ===================================== ================== 9 32 98.6 35 GTTCTTTGACCCGCATACGAGGGGATTGTGAC # Left flank : TTTTAATAATCGGGTATCCGCCTGCGTGGGTGCCCGCCGTGCCCGATGGGCCGGCACCACCTCTGCCCATCCTACAGGATAGAAACTCGTCCAAAAAACGGTCGTGTCCATACACCGTTTCTCAGGCTTTCATTTTATTCCCTGCCTTGCTAAGGCTCACCCTCAATCCATCAACTCGCCTGCCATTGTTCATGGATGGTTCTGACTACCCACGTTGTGTCACGGGAAACGACAAAGGGAAGCGCGAACCACAAGCTCGTTTTTTTGTGTTATGCTGTCTTATGTGGGAATCTTTCGAATAATCAATGTGTTGATGATTTTTTGGCGTCGAAAAGATGTGAGGGGTTCGCGATGCGTGAAAAAATATAATAAAATCGGATAAATGGCTCGTTTTTCAGGCCCCGGAACACGGCCTGTGCCAGGGTGTGTTTGCCTCTGAAGAGGAGGTTCGCGCAAAGACATGACAATGGCTTGTAAATCAGGTATCTTTCAGAGTTACC # Right flank : TGACAGAATGCATGCGTTTCCCATGCAACGGACGACACGAGGGGAACCACGGGGTTTCGGGAAGGCCGAAAAACATTGAAGAAATCTCCTTTCCCGTATAAAGATGAAAAAAACTTTACCTGACGCATCCACGTCGGGCCCCCTTTACTCCACCAAAGGAACGAACCGATGAGAAACTAGCCAAGGGAACCAGACCAGATCATGTGAATCTGTACACAAGGGCGACCGCTTTCGGGCTGTCATGCCATCACCATTCCCATGTTCCGTTCCCCTCGGCTCTTTTGGTTTGACGTATCGCGTCGGACCCGTCGGTTTTCCCTCCCACATGTGCACCCTTGTTTCTCAAGGACATATCATCCACGGGGATACCCATCCGACAACAGAGCGCTTTCCCCTTGCCCGACGGTGACGGAACATGGTTATAGCCATATAAGAAGGGAACCATGGGCCATTCAACCGTTGTTTTTGATGCGATAAGTTTTTCCTATCCAGCGTCGTGC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTTGACCCGCATACGAGGGGATTGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 925400-925140 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAADHO010000001.1 Desulfoluna butyratoxydans isolate Desulfoluna butyratoxydans MSL71, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 925399 37 100.0 38 ..................................... CTTTTCTGCGACTGCAAGGTCCTTTTTGGCTTTTTTTT 925324 37 100.0 36 ..................................... AAAATCCACGAGTTAAATTGCTCTACCTGTGCCTCA 925251 37 100.0 38 ..................................... TGTCTTGAGCCGATGGGTATCGGCTCGGTTCGTGGTTT 925176 37 91.9 0 ..........C.....................G...T | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 98.0 38 GTCCGAAACATTGACCCGATTACGAGGGGATTAAGAC # Left flank : ACGATGTGGTTCTCACCGGCCCCGGCCCTGTCTGGCTCTACCTGGCCATTGCCCACGGGCTCCATGGCCGTGCCCGGTCCTTGACCTATCGCTCCCCGGTCACCGGGGACGTGGTGATCTTTGATCACAATCCCTTCTGAGGAGAAGATAGCCCTTGGACGAACCCTGGCTTTGGGTCTAATCCGGTTTCCTACGGTTAGGCCCGGTTTGGCCTGGAACCACGGGGCGTTTCCTGGTGATGAGGCGTTGTTCCGGAGGACTTTTGAAAATGGGCTGTTTTTATGTATCGCCTTGAACGACGGGGATCTTCCCTTACTTTTTGAAAATGACTGAAACAGGCTTAGGTTATCCGGTTTGCATAACAATCTGTATTAAAGGGGAATCGCTTTGCTTTTTGTAGCGGAAGAATGGGGTTTTCGAGTGAAAAAAGAGGAAAGATCCGGAGGTTATCCGTTTTGGCTTCTTCGGGCCCCGTCCCCTATGGCTCAAAAAAGGGGGCT # Right flank : GTCGTTGAGCACAGACAACGTGCTTTCAATAATCGGGTATCCGCCTGCATGGGTACCCGCCGTGCCCGATGGGCACGGCACCACCTTTGCCCATCCTACAGGATAGAAATTTTGCCAAAAAATGGCCGTGAGTCTCCTCAATTCTTCGAAGGCTTTGATCTTATGCCCGCCCTTAAAAAAGAGAGCTTAGTCATTTGCCTGCCATGGCGCATGGAAAGCGAGGGAGGGGGTGGCAACGTTGTGTCAAAGGGGATGGCAAAGGGAAGCGCGAACCTCAAGTTCGTTTTGTTTTATTTGGGGTTGTATTGAGATTATTTGATGAATAATCAATGGGTTGTAATGCGGTTTTTTGACTGAAATAATGTTGGGGTTCGCGCGCTGAGAAAATGACCAATATAAGTCAGAGTGATGGTGCGCTTTTTACCTTCGGGGGACGCTCTGAACTATAATCTGTCAGGCTCTGCAAAGGAGGTTCGCGCAAAGGCATGACAATGACCTGT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAAACATTGACCCGATTACGAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //