Array 1 512347-512642 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDW010000001.1 Clostridium botulinum strain DFPST004 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 512347 32 96.9 34 G............................... TTATATTCTCTATTTTTAATCCTTTAAGTATTGG 512413 32 100.0 34 ................................ GATAAATTTATGAAAGGTCAAGGAAGTATAGCAG 512479 32 100.0 34 ................................ TGTAATAATACACTAATACAGTTAAAGTGCAAGA 512545 32 100.0 34 ................................ ATTGTACTTTATGATTTAAAACTTGACTTTTATC 512611 32 93.8 0 T..............................C | ========== ====== ====== ====== ================================ ================================== ================== 5 32 98.1 34 AATTGAACATTAACATGAGATGTATTTAAATT # Left flank : TAATGTTTCATAAAGAAATAGATTATGAAAATATTAAAGAAGGAGAATTAGATGAAATTTTAGAGGGGATAAAAAAAGAATTTTATAATCTAATAATATCAGTAAAAGAAGAAAATAAAAATATAATATTAGTTACTAATGAAGTAGGTTATAGCATTGTTCCAGCCTATAAATTAGGTAGGATATTTAGAGATTTTCAAGGTATTATAAATAAATTTATAGCTTCTTTGAGTGATGAGGTTTATTTAGTAACCTGTGGAATACCCTTAAAAATAAAATAAAATTAATTTTAGTAACTAATTAATCTAACTATAAGTAAAAGAATTTTCCAACCGCATTTAATTTTAAAATCTATTCTAGGTATTGAAATATAAGCTTTAAGATAAGTTTTATCTCTACCTTTATAAAAAATGGTAAACGGTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAAGGCTTATATGATATTCTTAAAATTAAGAAATGGCTATTTTACTAT # Right flank : CAGCATGTAAAATAAGGTGATTCAAAATAAATTAAATCTATTTTGAATCACCTTATTTTTGTGTAACAAATACAAGCTATTTTAGATAATATTTTAAAAAAGCATATAATTATTATTTTATATTGTCACAATAAACATTAATAGCATCTCTTAAAAATTTAGAAAGACCAGTTTTATATTTATCTATATTAGCAGTAAATCTTTCATCATTAACATAAATTTCTCCAAGACCTCTAAATATTTCAGGAGTACAATCATAAAAGTTTTTTGAAATATGCTCTCTAGATTGGTGTATATATTCTTGAACTTCTTTATCATCTGGATTTTTGTCCATAAGATTTGCTAGTTTTTTATAAATAATATCCCAATCTTTCATTATATTACTCCAATCTTCCTTTGTATATTTAGATGTTTTTTCATTACTTTCTTTATAAGCAGAGGTGTTTCCATATTTTTCTTTTACCTCTTCTGAATATTTTCTTTGATGCTCCTCTATTTCA # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTGAACATTAACATGAGATGTATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 941845-942074 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDW010000001.1 Clostridium botulinum strain DFPST004 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 941845 29 100.0 37 ............................. TTAGCTTTCAATGCCATAGCCATAGCTTTGTTACTAT 941911 29 100.0 37 ............................. TTTATTTATCACCTTCTTTAATTGTATAAATGATACT 941977 29 100.0 38 ............................. TAATATAACTTTAATAGTATGATAATCTGGAACTATTT 942044 29 96.6 0 ........A.................... | TA [942068] ========== ====== ====== ====== ============================= ====================================== ================== 4 29 99.2 38 GTTGAACATTAACATGAGATGTATTTAAA # Left flank : ATGCTGAAAATATGGCTAATGCTATTGTTAAAGGACTAGTAGGGGAAACTACAAGCAATATCACACCAAGTCAAGCATCTACAAATAATAATAGTTGGATTAATTTAGATGGTAAAACAGGCACTATAAATACACTAAGTGGTGTAAATATTAGGGAAAAGAAATCTACATCTAGTAGAATATTAGGTGCTTTAAGTACAATTATATAGAAAAGAAGGAGATTGGATACACATTTATTATCCTCCACATGGTGGATATGTTTATGCTAAATATATAAGATATTAAATTTTTGAAGGTATTTCTATAATGTGAGTAACTTTTATTTTTCCAACCTACTTTAATTTTAAAATCTATCTTAACCATTGCTATACAATGCTTTAGGGTAGGTTTTCTATATAAATTTTAAATCATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATGCTTTTATGATATCTTTAAAATTAAAGAATGGCTATTTTACTATG # Right flank : AAATAATAATTGTAGCTTACGCTGTAGTTATTATTTTTTTATTATTCAAAGGAATTTTCTAACATTTATAGAATATTAAATATAACGGCTTACCAATAATTTAGGCAACCTCCTTGCTTAAAAAAAAGAATCCCAATAAAAAGGGGTTCTTTTTGAATGGAATTTTCTATATATCTATATATTGGTGCTATGTTTTGGTCTATTCTTATTATATCCAGATGTAGAAAAATTAATCAATCAGAAATATATAATATGTAAATTTTTAAAGGTACTTCTGTAATGGAAGTACCCTCTTTTTTTATTGGAAAAATTATCATAATTTATATAAATTTATCATGAAAGCTATTGATTTATTATACTACACGTAGTATAATTATAATTGTAAGGAGGTGAGAAAAAAGGTGGTCAAATTAATAAGAAAATTAAAAAAGCTTGATAAACTACTGGGAATAGTCATCAAGCTACTGGTAAAAATAACAATCATAATAATGCCGCTTAAA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 220025-220186 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDW010000002.1 Clostridium botulinum strain DFPST004 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 220025 30 100.0 36 .............................. AATGATATATAATGGCAAAAGAATACGAGGTATTCC 220091 30 100.0 36 .............................. TGTTCATATGTACCTTTAGAATATTCGACCCAATCT 220157 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 100.0 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : CATAGGCTGATCCAATAGTTAAAAAAAGTTCTGCAGTTATATCAGAATGAGTAAGGGTATAGCGTCTTCCTAAAATAGGCTCCGTTGAGGTTACACCATTTCTAAATTCAACTGAAAGTTTATCAGTATTCAATTTGTTCATTTAATCCCTCCCCATACAATACGTTTTATACAATATTATATGATAGGATTTATGAATTTAGTATATTTATATATAAATCAATTTTAATTATAATATTTAACTTAAATCTTGTATCAGATCTTGTACTACCAATAATATATCAGCTAATAGTACAAATAAAATATTTTCATATTAATTGAATTTTTCCAGGCATAATAAATTTATAAACCTATTCTAGTCATTGATATATAAGGATTGGAATAGGTTCTTATTTTATATTTATAAAAAAACAAAATCACTTGGAAAACTTTCTACGAAGCCTTGTAAGATCAATGGGTTTATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : TTTGTACATAATCTGAAATTAAAGCGAAGTAACCCTTGAAAATAAAAGTACTAACAATGTTCTTTGAAGACTGAATAATACGGTGTTAGGAAGTAAAAATTTTTTATAACAAAATATATCTTTACAAATGTAGTAAGGTGGCTTACTATATAAATGAGGAGGTTTCATTATGGAAAGTTTTAAATTTAGTCTTAGGGATATACCAAAACGAGAGATTTTAAATGAATATTCTAGCCGATTTCCGGGTATAAATGTAGATGCAGTCGAAAGCTGTATAGCACTCCTCAGGACGGCTTCTGATATTTCAAAAATACTTGATGAACACTTTTCTAAGTATGGCATTTCGGAAGGAAAATTTACAATTTTGATGCTGTTATATCGACAGAGTGATTATCAATTATCTCCAATATCTCTTAGCAAAAAAGCTGAAGTTACTAAGGGAACTATGACAGGATTAATAGCTGGCCTTGAAAACCAAGGTTTCATAGAGAAAATCTCCA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //