Array 1 441886-444104 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACZEK010000005.1 Bifidobacterium longum subsp. longum strain 1898B Contig_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 441886 36 100.0 28 .................................... CGTGGACGGTGACGGTCACGGACGACAA 441950 36 100.0 28 .................................... CAACCGACCAGATTGATGTCAGGCTCCG 442014 36 100.0 28 .................................... ATGAAGTCTCCATAGTCAGTCCATCCGA 442078 36 100.0 28 .................................... CAAGTGGAACTTGTGTACTCACTGCATA 442142 36 100.0 28 .................................... ATTGTAGCCGGGTCACGTATGCATTTAG 442206 36 100.0 28 .................................... TATTCGTTGCCGATGATGTTGCGGAGCT 442270 36 100.0 28 .................................... CTGAGATGCGCGCTGGAACACGCTCAGT 442334 36 100.0 28 .................................... AATGCGCTGAAATACGGGTTGGCCAACG 442398 36 100.0 29 .................................... GTGAGGGACACCTTCATCCGCATACTGCA 442463 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 442528 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 442592 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 442656 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 442720 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 442784 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 442848 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 442912 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 442976 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 443040 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 443104 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 443169 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 443233 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 443297 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 443362 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 443426 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 443490 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 443554 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 443619 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 443684 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 443748 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 443813 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 443877 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 443941 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 444005 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 444069 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 35 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCATTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //