Array 1 905746-900579 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHJK01000001.1 Sulfolobus islandicus M.16.2 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================= ================== 905745 24 100.0 40 ........................ AAAGATTTTGCGATTCAAGTGTCTTTCATTGACTTTAATC 905681 24 100.0 39 ........................ TGTGTTTCAAACTTCTCCCTCTTCTCCTATAGCATGCAA 905618 24 100.0 38 ........................ CTTCCCCACTTTTTTGACTTCTCCCCCTTGTATTTTAA 905556 24 100.0 38 ........................ GCCTATGCCCCGCTAAACATAGACGTTGGCGGGCCAGG 905494 24 100.0 40 ........................ TCAATTCCTTTCTGAATGGGCTTTTTAAACGCTGAAATGG 905430 24 100.0 37 ........................ TTTGTAAAGCTTGCTCCTGTTGTTCTAACTTTTGGTT 905369 24 100.0 38 ........................ CTTCCTCTGTCGTAAATGTCTACAATTGTCCATGTTTG 905307 24 100.0 41 ........................ TCGAAAACGGGGAGAGTACTTATAATTATTAACGCTATAAT 905242 24 100.0 39 ........................ ACTTTTTGTAATTGTATTTGTTGTTGTGTTGTTGATTGA 905179 24 100.0 39 ........................ CTATTACTATCGCTATTGCAAGCACGAATATTAGAACTT 905116 24 100.0 43 ........................ AGTACACCATCTCAATCTACAGTCTTGACACTATACAACCCCT 905049 24 100.0 41 ........................ GATGCAGATGCAATCAGAGAGTCACTGTCTAATGCTGCAGA 904984 24 100.0 40 ........................ TCTGCATAAACCCTCCTCCTCCTTGTGTTTGTTGTGCCGA 904920 24 100.0 38 ........................ CTAACGCAAACGGCGTTAAAACACTTGCTTTCAAAGAA 904858 24 100.0 40 ........................ AATATCCTATGAACGAGAAAATAGAGTTTCAAATAAATAA 904794 24 100.0 41 ........................ TCTCTTAACATATCAATTACTTCCCCATCCTGTGGACACTT 904729 24 100.0 38 ........................ TTACGGTTATGTGTGTTACCTCGGACATGTTTCTCCAG 904667 24 100.0 44 ........................ GCTTATGTTCATACACTCATCCATCCCCATCACTTATTAACTAT 904599 24 100.0 39 ........................ ATAACTCTACTGCATTTTCTCATGTAAATTCGAGTGCAT 904536 24 100.0 37 ........................ AACTCTTCTACTGTCTATTACATGAGTTCTTTTGCTG 904475 24 100.0 40 ........................ ACTATATAAATTTGAAAGCGGGAAAGAGAGAGAAAGATTT 904411 24 100.0 38 ........................ ATGCTTCTGCATATGGTACCAAACCTCAGAATGCCGGT 904349 24 100.0 40 ........................ AGTGAAAATGACTTTGCCCTCCTTCTTAACTTGAACCCTC 904285 24 100.0 41 ........................ CTTAGTAACATAATAAATGCTCTTCAAACAACAGACCTAGG 904220 24 100.0 45 ........................ GAGCAGAAAATTGCCAGAGAAGCTGCAGCAAACGCGGAGAGGAGG 904151 24 100.0 41 ........................ AGTTACCATTAGCCACCACCTCCACCACCTAATGTTTTCTT 904086 24 100.0 39 ........................ ATTGTTATGCTTTTAACTGATGCGTTGGCAGGTGGGGTT 904023 24 100.0 41 ........................ GAGAGTTTCGTGGACTTAAAGAAGAAATTTGATGAATTAAA 903958 24 100.0 39 ........................ CTGGAAACGTAGTCTGCTACAGCTGTGTAAAGATCGAAT 903895 24 100.0 39 ........................ ATACTCCCGCTGTCTGTTTACATCGTCAAAGTCTATGAC 903832 24 100.0 38 ........................ GAAACTGCGGTGAACAATTGGGTCCAGAGAACACAAAG 903770 24 100.0 41 ........................ CTTGGCTCTGTGGCGATAAGGCAACTAATAAACAAAGGATA 903705 24 100.0 39 ........................ ACATCAAAAAATAGATACCCCAATCCTACGGTGTATCTA 903642 24 100.0 40 ........................ CCTGCAGTTCCAGTCGCAAGAGTCTCTTCTACTACAACAT 903578 24 100.0 41 ........................ ACGCTAAGACCAGTTACAATTGCGAATAATGTAATTGTAGT 903513 24 100.0 40 ........................ TATACTTCGTTGTACAAGTAATTTTGCCCTGGCGATGAAG 903449 24 100.0 37 ........................ GCGAATAGAGCATTAGGGTTTTTGACAACGTAAGGTT 903388 24 100.0 41 ........................ TGTTTGTTACTAAAAGTCTCCCTAAGATGTTATCGGCAAAT 903323 24 100.0 40 ........................ ATCAAGTTGCAAACTCATTGTTATTATCAAGTCCAAATGT 903259 24 100.0 40 ........................ AACAACGCTAAGGAAGCTATATTAATCACAGTAGGAATTA 903195 24 100.0 43 ........................ GATCGATCTAAAGTATTATGCAACATAAGAGCAGTAACATCTG 903128 24 100.0 38 ........................ TCTTTATACAAATTATACTCTTCAGACTGAAATAACGC 903066 24 100.0 40 ........................ CTAGGTAGGAAGTTGGCGGGCGTAATAATGATAAGATCGA 903002 24 100.0 37 ........................ TTCACGACCACGCTAACCGTCGCACTACCGCTACTAG 902941 24 100.0 38 ........................ ACAAAACGAAACTTTTTAGTTTTGCATTGATGACCTTG 902879 24 100.0 40 ........................ CCAGCGTCTTTTACTTTCCACCAGCTTCCAATTGATTGAA 902815 24 100.0 40 ........................ GGCAACTTTGTATATGCTGCCACACCTGATCTAGAATAGG 902751 24 100.0 41 ........................ AACTTTATCGACCTTTTTTCTTATTTTTGTAATAAAAATTC 902686 24 100.0 41 ........................ ATGAATTGAATAAGAACGTAAAAATTAACGCCGTAAACCCT 902621 24 100.0 43 ........................ TGGGGAACACAACCGTTCGAATACAAGGGATTTTATGACACAG 902554 24 100.0 38 ........................ TTTTTCACTAATTCTTAAGAAAAGCGGAATGTCCCACA 902492 24 100.0 40 ........................ TTTAACTCTAGAATTCCTACACTCGTACTTACGTTTGTCT 902428 24 100.0 37 ........................ AAAGTACGCCGACCCGAACCTCAGGCTGGACGTAGAG 902367 24 100.0 39 ........................ TTAATTTCATCCTCTTTAGCTCTAATAGCCCATAAAATA 902304 24 100.0 41 ........................ AATAAGATATACAGTGTTGGGTAGAAGCCAAAGAAGCTGGT 902239 24 100.0 39 ........................ ACTATCAATCGTCAGCTTCTGTTCTTTCTGAATTTCTTC 902176 24 100.0 40 ........................ TCTGGGTAAACCTTTATTTCTCCCCGCCACTACTTTTTTA A [902163] 902111 24 100.0 40 ........................ AATACAATAATCCTCCCTCGCCTTTTTCATCCTTTTTCCA 902047 24 100.0 36 ........................ GTTATACCTCAGCACGCTGGAAGCTTGCAACTCCAT 901987 24 100.0 39 ........................ TAATAAGTCTGTATCACTTCTCCAACCAAATCCTTTATA 901924 24 100.0 41 ........................ TCATTTATAACATCTGGTATGTCTTCAGTTTCTGTGTATCT 901859 24 100.0 38 ........................ GAGGTTTCCTCAGGGTGTAGCTGCAGCACAACCTAAGA 901797 24 100.0 39 ........................ CCGTGTCGGCGACGGCGGGGTAGAAAAATATAAGTCTCC 901734 24 100.0 39 ........................ GTTCTATTGGTTGTTTGTTAGTGCACACACAAGGGACAG 901671 24 100.0 39 ........................ AGTAATATAGTACGTGAGGAAAATTAAAGGTGTTGAGAT 901608 24 100.0 38 ........................ TGCTAATTTCTGGTAGGTTTGAAGCGAAGTGCGGAAAG 901546 24 100.0 37 ........................ ATGCTTACGTCTAAGGCCTGTCCATAGCTTAACGTGG 901485 24 100.0 43 ........................ ACAGAAGTTCTACCTCAGTGATATGTCTCTTTGGCCTTTCCCC 901418 24 100.0 41 ........................ AAGGTGAATAAAGAGGGCTTAGATCTTTGGATGCCAAGTAA 901353 24 100.0 39 ........................ AATTCAAAGATGCCCTCGATTATCTTCTCGGGAATTTTA 901290 24 100.0 40 ........................ AATGGCGAAACTGACAATGAAGCAGAATGCTGTACTGTAT 901226 24 100.0 38 ........................ ATGTCAAAACAAAGTAATAATACTTGGGTAGCGACCAT 901164 24 100.0 37 ........................ CCCGTTACCGCCTCGTATGATAGATCTAACCAATATG 901103 24 100.0 39 ........................ GATAGCTAATTCCACCGCAGTGGTGGTTAATCATGTCAC 901040 24 100.0 39 ........................ TATTATAACTTATTACCATCTGAGAAGCACTAAATATTA 900977 24 100.0 39 ........................ ATACTAATTATGTTGGCCCATTAACGCCTATCGTATATA 900914 24 100.0 37 ........................ TATACCTTCAATTAAATCGACAGTTGAAATGATTAAG 900853 24 100.0 38 ........................ TTAAACACGTATAAAGTCTCATGACTGTTACCAGTGCC 900791 24 100.0 39 ........................ GTCTTTATTAAAGTCCCTAGCTCTCTCCCTGCAGCTCCT 900728 24 100.0 39 ........................ TGGAATTATAAATGGCTCATCCTCGCAGGTGCGGACGAC 900665 24 95.8 39 ........T............... ATCATTATTATAGCCCCGCTATCGAAAGTAGCATTAGGT 900602 24 95.8 0 ........T............... | ========== ====== ====== ====== ======================== ============================================= ================== 82 24 99.9 39 GATAATCTACTATAGAATTGAAAG # Left flank : CTTTATTGGGGGCATATGATAGTTCCATCCCCGGAGCTCCTCTTCAATAGGGTCTGAAGCCCTATATGAGTGGAGCCTTCGTAACTGTCTAATTATCTGCGACCTCATAATATAATAGTAGTTGAAAAATCTAAAAACCGTTTTAAGGAGTGGGGTAAAGACATTCCCAAGTTTACTAGGGATTAGCCTAGAATTCTGAGCGTCATCTCTATATAAAGAGTAATAATAAGATTAGGGAAAGAGATTACTCTACTGTTAATGGAGTTGTTTTGTGGTTTTGTATTTTTTGTCCCGTTTTTGTAAGTGGTTTTTCTTTTGCGTTTTATGGAGGGGAGGTAGGGTGTTGTCCTAAAATAATTACCTTTATGAAGAATGCCTTATTATCCCGGGTTTAGTAGGGAGTGAAAGGATGAGGAGAAAAATTGAAAAGATAATACAGAGTAAAGCTTATAAATAACGAAGAGAGAACAAGATATTAGATAAAAGTTAATAAACCCTCA # Right flank : TATACTATATTCTATGACTTGTTTGAAATCTAAATCTAGGGAAGCCGTATGGGAAAAGACGAAGTCCTAATAGATATAAGTACGTTTATATCGAATAAGAGAAGAAAGGGGAAAGTTAGTGTAGTAACGCTAATAGAAATTATGGAATGGGCTTTAAGGAAGTATAATGAACATAGTAAAAAAGGTGATAAATTGAGGGCTTTAGGTTACCTAAATCTCATAACCTCACTTCCGCTAACTGTTGATGAAGTAATTGAGATAAGAGGTGATGAAATAAGAGATCTAGTGTATTACGTAATTGAGAAAAATTTAGATCCTACTGATGCTTATTTTGTAGTTTTAAGCAAGAGGTTTAAGATGCCTATAATTACAACGGATAAGGATTTCGAAAGGATTAAGGATGAAATAGAAGTTATATACCCATGAAATAACGGTTATGTAAAATCTATGCTTTGTGGGCTATATTTTATGATAGCCAACTAGAAGCATAGAGGTATAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GATAATCTCTTATAGAATTGAAAG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.10,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], // Array 2 910343-917168 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHJK01000001.1 Sulfolobus islandicus M.16.2 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =========================================== ================== 910343 24 100.0 42 ........................ CTGATATACTATCCTCCGGCTTAACATAGTATATTATAACAA 910409 24 100.0 38 ........................ TAGTCCACGAGTACGGTGTTTCAGGATTTTCTACACAA 910471 24 100.0 39 ........................ TGTAAACGCGTATGTTACCCTTCACGCTCACGAAGTTTA 910534 24 100.0 37 ........................ TGTAAATTCGAGTGCATCAGGATATCCGTTGTTATTT 910595 24 100.0 39 ........................ ACCACTGCTTACCAATCTTCTTATTGCAACCGATCCTAA 910658 24 100.0 38 ........................ TAAGACTGAAAATTCTTACAAATGTTCTATGGCATATG 910720 24 100.0 40 ........................ AGTATCGGTATGTCTACGCCATATCTCACACTTACTTGAT 910784 24 100.0 38 ........................ CATAACAAATTTTCTGTTTGAGTCGTATTATTTGATAG 910846 24 100.0 39 ........................ CTCGAAAACCCAACCACTCCCGTTAAACTTTTACTAACT 910909 24 100.0 40 ........................ CTGAATTCTCCGCCGTATCTTTCTGCAATATCCTCCAAGT 910973 24 100.0 39 ........................ TTCCGTGAAATTATAAAGTTCTGTTACACTACAAATTTA 911036 24 100.0 39 ........................ TACATAAAGTTAATCACTATGGATATGGCATCATCTTTA 911099 24 100.0 38 ........................ GTAAAAGTACAAATCTACGTATTGACACCAGTATATGC 911161 24 100.0 40 ........................ TGAAATTCACCTCTAAAAATCATTGAACTACACTCTTCAT 911225 24 100.0 41 ........................ GCCACTCGGAGCTCCCGTTACAAAAAGATCTATCAGTTTAT 911290 24 100.0 41 ........................ TATATAAATCCGAAAGTGGGAAAGAGAGAGAAAGATTTATA 911355 24 100.0 41 ........................ AGCGCAGATCCCGCCCGCTTGGGCAAAATGGACACACTCGT 911420 24 100.0 41 ........................ AGCGTAAGTAGATTGTTATCCAGCACGACGTGATAGATTGA 911485 24 100.0 39 ........................ TTATATTATCGAAAATGTCGAAGAACACGTTTAGATCGA 911548 24 100.0 43 ........................ AAAGCAAATATAACTTCAGTAATACCTAAATTATTAGAATTAA 911615 24 100.0 38 ........................ TTTTTTATCGACTTAGAACCTAGTTGATAACTTTCGAT 911677 24 100.0 41 ........................ GCCATGACGTTGCGAGATTGAAGGTGCAAAACGTGAAGATC 911742 24 100.0 39 ........................ GTTTACTATATAAAAACTGAAAAAAGTTTAAGGATCAAG 911805 24 100.0 42 ........................ TGAGTTATATCGAGGCACATTAACGGGAGTATTGCCAATAAC 911871 24 100.0 37 ........................ CAGGAGGTGAGGGGAATGAGCAGTGAAGAGATACCTT 911932 24 100.0 38 ........................ TTTCTTATTGACTTAGAACCTAGTTGATAACTTTCGAT 911994 24 100.0 39 ........................ TATGTCATTGATGACCATGTAATGGAACGGGTGAGGAAT 912057 24 100.0 37 ........................ CCTAGTGTATGGAAAGAAGTTGAGAAATTAGAGCAAG 912118 24 100.0 40 ........................ TTTCATTGAAACGATAAGGGGTGGAAAGAGTGACTAAGAT 912182 24 100.0 40 ........................ ACACCTTACCCATCCCCAACACCAACCCCACCACCTGCAA 912246 24 100.0 38 ........................ CGCGACTTATACCTAATGATGCTTATGCGAAATATAGA 912308 24 100.0 39 ........................ TACTAGGTGGTTTTGGTTGGATATTAAAATTTATCATAA 912371 24 100.0 39 ........................ TTTCCACTGTCAATGATAATCGTCGGCTTTTCTTTCTTC 912434 24 100.0 38 ........................ TTTGAAGATAAGTTCTATGGAGTTGCGATAGCATATAG 912496 24 100.0 42 ........................ AATATTTTATCAGTTATGATGATAATCAAATGGGTAGATTCA 912562 24 100.0 39 ........................ AATAACTTCGATAGTGGTTGCAACACCAGGATTTGTATT 912625 24 100.0 39 ........................ ATATTGTGTCTGTAACCATTCCATATATAGGTTCCATGT 912688 24 100.0 40 ........................ ATCTATTTTATTGTTACCTAACATGGTTAAGAAAGTCTTT 912752 24 100.0 41 ........................ ATGCTGCCCCAGCGTTAGATGGTTATGTGCTGTTTTATAAA 912817 24 100.0 37 ........................ TGGTCTGGTCAGCTTTTCATAGGCGTCGCTTTTAACT 912878 24 100.0 42 ........................ GATAAAGATTGACTTCTCTTTACACAATAAATATAACTCAGC 912944 24 100.0 40 ........................ TTAGCGAAAGCCAAAGCACCAAGAAAAACAATTACTCTCT 913008 24 100.0 41 ........................ TTTGATAATGGAGGTATTGTACTTGCACGTAACGATATCGA 913073 24 100.0 40 ........................ ATTATCAGTACCGAAGGACGGAGCTTTACGGCTTCATCTA 913137 24 100.0 39 ........................ AAACTTATAACGCCGTTCTGGTTGTGGATGAAAGGAGCG 913200 24 100.0 36 ........................ TCGATAACGGTCTGTGTAAGCGGTTGGATTGTAACA 913260 24 100.0 40 ........................ TTTCCTCAGTCATGAGTGGATCACCTCATCCCTTACTATT 913324 24 100.0 42 ........................ CAGCAGATATTTCTTGAACAACTCTAACGTCTCCTCATCAAT 913390 24 100.0 38 ........................ ATCCTCAATAGAAAACTCCCTACCCTGATTTGTTCATC 913452 24 100.0 39 ........................ ATATCTTATATAATTCTACAATTGAAAAACGGTAATGTG 913515 24 100.0 43 ........................ GACACGGATTGGGTTTACCGAGACGAGAGGACAATACTCAAAT 913582 24 100.0 39 ........................ GTTGTCTGTTTTACCCCGCTCTCAAATCGGTTAATATGT 913645 24 100.0 39 ........................ AAAGTTGAAGACAGAGGAAACCAATACTACATAGAGTTT 913708 24 100.0 40 ........................ TTTATATAAGTCCTAGGAACTATCACCCTACCATTTAAAT 913772 24 100.0 43 ........................ ATATATCTTATATCTCTCAGTTTTACGCACAATTCGTCAATCA 913839 24 100.0 39 ........................ AAATTTTTCGATTTCAAAGAAGGCGAAATCACATTATAT 913902 24 100.0 40 ........................ TCCTATGTGTTTCTGCCATTCACTCATTGTTTTTCAACCT 913966 24 100.0 41 ........................ CTAGCTTCTCCTCTTAATACTCTATCTATATCTCTTCCCAA 914031 24 100.0 40 ........................ TAGTCATTTTCAGACCTGGATGGCTAGGAGTTCCCCTCTT 914095 24 100.0 42 ........................ CTGGGACAAACTGCGTTAAAGAATCTGCTAAAGAAAGGTGTG 914161 24 100.0 43 ........................ CAAGTTCAAATTGAGGAAGTTGAGGTAACTTGAGGTCTATAAT 914228 24 100.0 40 ........................ TGTGAAAAGGACAAGGAAGTTTGGTTGGAGAACGGCGATA 914292 24 100.0 37 ........................ CTCTTCTATATCTTAGTCCTCATAATTGTACCCGCAG 914353 24 100.0 41 ........................ ATGTGCATCTTCATCAGTGTATCTAATGTAGGTCTTACCGG 914418 24 100.0 41 ........................ CCCGGAACGTTATGACTTGTTACGTCCCCGCCGGTACATTG 914483 24 100.0 37 ........................ AAACCTTTATTACAATATATGACATCTGTTCAACAAA 914544 24 100.0 41 ........................ ATATCATTAAATGCATTTGATAGTAAATTTACTGCATTTTC 914609 24 100.0 39 ........................ GTCTGCACATCTTCCATGACGATCATATTACCCTCAATA 914672 24 100.0 39 ........................ GACTTCATCGCTACTTTGCTCTATTGCTTTTTGTCTTGT 914735 24 100.0 42 ........................ TGGGTTTATATTCGTAAAATACAAACCACCTTGCACATCTTG 914801 24 100.0 41 ........................ AAGTATTGCCAACTACGATCTCATTATAAACGGTTATCTCG 914866 24 100.0 40 ........................ TATTATCTTTATCTTCTATCACCTCTGCTTTGTTTAGCTT 914930 24 100.0 40 ........................ CTCAACTTGGACTTATGAAGACGTTCAAGATTTCGTTTTA 914994 24 100.0 40 ........................ CTCGTTCCACCGTTAATCTGTATTACATCAAGAATCTGAA 915058 24 100.0 41 ........................ TCTAATATAATTTATAGTGTGGTAGTCGAGGTTGTGTTTAC 915123 24 100.0 40 ........................ AACGTTCCCGAACTTGATCCTAGATTTGTCATTTGAATTA 915187 24 100.0 38 ........................ CTTTCTCAATAAGTTTAGTCATGATTTCCTTTGGACTA 915249 24 100.0 41 ........................ TTTTAAGGAGATGGTTTTATGAAAATTGCCGATAAGGTCAA 915314 24 100.0 39 ........................ TGTCGTATTGATTTAGTTCCTAGCTCGTAGTGATCTATA 915377 24 100.0 40 ........................ ACAAAAGCTATAGAAGGGGCACTCTAAGCATTCGGCATCC 915441 24 100.0 41 ........................ GGATTGATAGATTGATAGATAGAGGTTCCCCAAAATGGCCC 915506 24 100.0 38 ........................ TTATATTCCTTCATATTAGAATCTTTTATGATACCATT 915568 24 100.0 41 ........................ ATTATTTATGTTCATACCCAGCCTGGTGGAGATGGGGATGG 915633 24 100.0 39 ........................ AACATTGAAGACTATCTAAGTTTTTCGTTAACGGAAGGG 915696 24 100.0 42 ........................ ACTTTTTAGAAAGAGGAAATGGTTCCCCTTAATACTACGAGA 915762 24 100.0 40 ........................ ACGCTTACGGCTTAGCTCAGAGTTTCGATACAATCTTCAA 915826 24 100.0 40 ........................ TCCAGAGTTCTATTTTTATCTATTTCTTTCAGAAAGTTTA 915890 24 100.0 39 ........................ ATTTGATAATACTTATTTCTCAATTCAACTTCTAAATAG 915953 24 100.0 39 ........................ TAGCATTTCCTATTACTTGTAACACTTGGTGGTTTGCCC 916016 24 100.0 38 ........................ AGCTTGCGTTGTTGGCATGGATGACCTATACGCCGAAA 916078 24 100.0 39 ........................ AATGGGATGAACGTCAGTATACGAATAGGTGCACCTTTG 916141 24 91.7 37 ......................GT TTATGCGAGAAAAGTTTTCCAAAGATGTGGGTTTAAA 916202 24 100.0 39 ........................ GTTTCTAAAAATCAAGTAAAAGAAGTGATCGGGCGTATA 916265 24 100.0 38 ........................ CATTATAGACATTACAAATCCCAATTCTGGAAATATAG 916327 24 100.0 39 ........................ GGTAAATTGATCGATATGAAATATAATATACAAAATAAT 916390 24 100.0 41 ........................ ACACGTGAAAATCTTTTGAATGCGTACAAGGTTTACATTAA 916455 24 100.0 39 ........................ TGATGAAATAGATCCTGTTGCTCTCGCAGCAGTCTTATT 916518 24 100.0 38 ........................ AATTATTTCAGATTTCAATACTCCCCGCTTTACGAGTT 916580 24 100.0 40 ........................ ATACAATATATGTTATAACTAATATATAAGCTTTTCGCTT 916644 24 100.0 38 ........................ AAAGCTTCTTGAAAAGTTAAGTCATGCGTAATTTTTAA 916706 24 100.0 38 ........................ TTACAGTTATTGAAATCAATAGCGAGAGACAAAAACTA 916768 24 100.0 43 ........................ TGGACACTGATATAATAACGCCCCCGTAGCTTCATCTCTTTGC 916835 24 100.0 37 ........................ ATATTTCTTCCCTTTTTGTTTAAAAACTTGTGATTTG 916896 24 100.0 39 ........................ ACCAAGGATCAGATTATTTTACTAAAATCTCTTACAAAT 916959 24 100.0 39 ........................ TATTATTACTGGTCTTGAAGTAGCTAGTTGCTTTACTGC 917022 24 100.0 36 ........................ CCGACAATTACTGCTGGTCAGACACCAATTCAATAT 917082 24 100.0 39 ........................ ATGTAATAATCATCTCCTCTCCCGCCAAACGATAAATGA 917145 24 95.8 0 .......................T | ========== ====== ====== ====== ======================== =========================================== ================== 108 24 99.9 40 GATAATCTACTATAGAATTGAAAG # Left flank : CTATTTCATAAACTTTTGGAAGAGGGTAGTTTAACCTTGAAGTTTGAGCTCTTAAGCTATCTATTGCAGTCCTAGTTCCAGAGATAATTGGAGAGGGAACAACGATTACAAGATTATCTTCTTTCTGTGCAGAAGTTTCGTTTAGAAGTCTAAGCAGAAAAGTTTCATTAAATCCCATGGTCACAAAATATGATTTCATATCATAAAATTGGTATTACCAACTCATAAATCTTTCTATAACTTAAGAGCTTGTAGCAGAGGGAGTTGTTTTGTAGTTTTGTATTTTTTGTCCCGTTTTTGTAAGTGGTTTTTCTTTTGCGTTTTATGGAGGGGAGGTAGGGTGTTGTCCTAAAATAATTACCTTTATGAAGAATGCCTTATTATCCCGGGTTTAGTAGGGAGTGAAAGAATGAGGAGAAAAATTGAAAAGATAATACAGAGTAAAGCTTATAAATAACGAAGAGAGAACAAGATATTAGATAAAAGTTAATAAACCCTCA # Right flank : TACTATAATGTAAGTTGGATTTTGTAAGTAGAGTCTTTATTTACAATAGTTACAATGGAGTAAGAGGACTAGTTTTAGCTTAAGATGTTGAAAATGAGCGACTTAATGGAGGCAACTAGATATATTTCGTATTAGCAAATATCATTTTTCTTTCGCATTTATTAAGAAAAGTATATAAAAATCTTGGTGAATTTAGTTGACGTAATACGAGATACTCTTTTCCCTTAACAAGAAAAATTTAATACCTCATTTTTCATATTTAGGGTATGATACTAATCTTAACACTTGGATTCGACGAGAAGTTTCAGTACCGCGCATTAATGAGACAAGGCAAGAGTATTGAAAAGGTCATTGTTGTTGGAGGGTTCAAGGAGGAGAAGGCTAAAAAAGCGTTAGAATCGCTCACTAATTTTCTAAAAACAGTTAACGTTCCTTATGAGACTATTGAAGTTGACCCTAGAGACTTTGAAAATATTGTTGAGAAAGTTGGCAAGGTTATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GATAATCTCTTATAGAATTGAAAG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], //