Array 1 38707-38411 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHVN01000017.1 Anoxybacillus tepidamans PS2 N667DRAFT_scaffold00016.16_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 38706 30 100.0 37 .............................. AAGCGAAGGAAGAGAAGAAGTTCCTAACGATTCCAGA 38639 30 100.0 36 .............................. TAAATTTCCTGTGTCCGCTGGCGTAATGCATCCCTG 38573 30 100.0 35 .............................. TCGCTATAAAGCGATCAACTACGAATTTTTGGTAA 38508 30 96.7 38 .......................C...... ATTGATGTGTGAAGCAACTTCATTTCTGGGGTTGCTGC 38440 30 70.0 0 ...G.....T..AGG..T..A.CC...... | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 93.3 37 GTTTTTATCGTACCTATGAGGAATTGAAAC # Left flank : GTTTTGGGTACGAAAAAGCGGTAGCGTTGTGAGAATCGTTAGCTAAACACCATGGTTTCTACAATGCAAATAAAAGAACGGCTTTTGTCGCTTTTATGCAATTTATAAAATACAACGGGTATGATTTGAATATGCTGACGAAGGCCCCCATTGAATTTGTAGTCGATATTGTCAACCATCGTTATTCGTTTAAGGAAATGGTGGAAATAATTAAAGAATATACGACATTGCGTGGCTAGCGGTGTCGGAAAAATACCCTCGTTGTTGTAGTAGGTAGATGGATAACAGCAACTATTTGAAATTTCATCATCAGCAACAAATGGCGACCAAGTACAGTCGTCGATCGCCAATCGTGCAAAAACTCCCAGGGATCGACGACATATTGCCTTTTTACGAAACCGCCGCCCGGCAAGGCATTGCGCTAAAATATGGGTTTCGATATAATAAAATCGACGAATTGCTCCAAATAAGCAAAATGCTCATTTATCAGTGCTTTTTTG # Right flank : TTCCCAATGATTTTCGCTGTTTCAAATATTGATGTAACGATGAATAGCCGAAACGTTCGGGCTTGGGGGAGCAATTATGAATGGTATTACTGTAATCATCGAGTTATTATGTAGTTTTCTAGTGCTTGCGGCGGGGCTCGTTCAGCTTAAAAACTCGCTTCGATTTACCAGCGTCATTGAACAAGAGAGTGTTACGATTCAACATGTTTTACGAGAGTTGGATGCTGATTTTTTCAAGCTTCTCCCCGTAACTTTTACCTCTATAGCATGCCCGATCATCATTAAAGGCACCCACTTGGAAGCCCTGGGGCATATCTTTTTTCCAAGCTTGGCTATAACCGGAGCTATTGAGAGTATTCATTATTTTTTAAAAGATTGGATGGCTCGCAAACAACTGAAGATCGGATACTATAAGCGTTTCGCCCTTGCGATTTTAGGGATTGTTTATGGTGTTTTTATTTGATAAACATCCTCGGCGCAATACCTCTTGTTGCTGTTCT # Questionable array : NO Score: 8.72 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 4816-5625 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHVN01000013.1 Anoxybacillus tepidamans PS2 N667DRAFT_scaffold00012.12_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 4816 29 100.0 36 ............................. ATGAAAAATCATCGCTTTTTTGCAAAATGCGGTAAA 4881 29 100.0 35 ............................. ATTCTCCTGCTTAAAAATTATCAGGAGGTTGTAGA 4945 29 100.0 35 ............................. ATGCCAGATTGGTTCATGGATAAAGTTACTTCTAA 5009 29 100.0 35 ............................. CGTATTGATCTGGATCGATGATCTCTAGCTCAAAC 5073 29 100.0 36 ............................. TGTTATCACTACCACCCTTACCTATCATACCTAAAA 5138 29 100.0 37 ............................. GAAGTTTTAAAGTAACGCAGCAGTACGGTTCAGTTGC 5204 29 100.0 37 ............................. ATAAGCCGCCAACTACGCCAAGCACAACGAAATCAAC 5270 29 100.0 37 ............................. GTGTTTTGAAATATTCTTTTGAAACTTCGCTGTGAAA 5336 29 100.0 36 ............................. TTTGCCGCTGCATCGCTTCGAGTTGCCGGTTGACCC 5401 29 100.0 37 ............................. GAGAAATGGGGGCGTAAATGCTGCAGGATAAAACAAA 5467 29 100.0 36 ............................. GCGGCGCCGGATGCCATGCTCTCTCCGTTTTGCTTC 5532 29 100.0 36 ............................. AAGGGATAGCAGCTGCCGTCCGAAGTGCCCGTCCTG 5597 29 86.2 0 ........A......G........G...T | ========== ====== ====== ====== ============================= ===================================== ================== 13 29 98.9 36 GTTTAGATTGAACTTAGAGTTATTAAAAG # Left flank : CAAAAGACGGATAAAAAACGCGTTAAAAGCTGTACGTAACACATTGGTGGATATTGAAGGGGCAATGTGCTCAACCAATTTACCGCATTTACGGGGCGTTTATGGCATCGTAACGGAAAAAACCGATCGAGAACAAATAACAGCCAAATATAGCGCATTAAATGAGGATTTTATCGAGGTAAATCAAAAACTATCGACCGTTTCTCATACTTTTAATAATATTCAGCAGTTTAAGGAACTAATTGAGTTGTATGCAAGTGATGAATTTCTAGATTTTATGATTCAGCGAAATATGGAATACGTTAAAACCTTTCATTCCTAATATTGTCTGCAGTAAACCCCAATTTAGATCAGTCATTATCAAATGTTGATATATCAAGGGTTAGCACTATTTGAGAAACTCGTCCTTCTCCATGATTAGAGGTTTACTGCAAATTTGCAAAAGTTGCAGAGTTAAAACATCAGATATACCAATAAACATCATCTATAAAAACAAGGGG # Right flank : TATTAATATGTCCAAAACGTTCGTATTTATCGTATCCATAATTATGTTTAATATGAAATTACGTGCTGACGGCAAAAAATCTAGTGAACTAATTTTAGATGAAAAGGGAGGGGGATTCTTTTTGATATACAAAGTAATTTATAAAACAGCTGGATTTTTTTCACTTAAAAAATATAATGACAGCCACCTAAATGGAAGAAGTTATGAATACCCGATGGCTTATACAATAAGGGGAGCAATTCTTTCCTCCGTTATTCAACTTGAGGGAATAGAGAAGGCTAAAGAGTTGTTTTATAAAATTAAAAATGCGATTTTATATATTCAATACCCCCGCGAACATGGAAAAGCTTCTGTTAAATTGAAATTGGCCTCTAATTCGTATTATGATGAAAAAAAAACTAACAACGAGGAAGGGTTATCATCGGTTGGAGTTCGCGAATTTGTCGATGTAGAAAGTATTGTCTTTTATATTGATAACTCGATTCCGAACCTTAAAACAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGATTGAACTTAGAGTTATTAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 136851-136555 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK211085.1 Anoxybacillus tepidamans PS2 N667DRAFT_scaffold00007.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 136850 30 100.0 37 .............................. CAATTCCATTGGCTCGCTGATAAGTAGATCACCATCG 136783 30 100.0 36 .............................. AATCCAATAAAGAAACAATCTTTTTTAACCCCTTTT 136717 30 100.0 37 .............................. TCGGAAAGCGAAAATGCGAAGGCTGCGGAAGTGAAGT 136650 30 100.0 36 .............................. TCGGCACGTACACACATCATTTTGGCAGGACGCAAA 136584 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : CGGTGGATGGAAAGAAAAAAACACAATTTTTTAATCCGAATGATGAAGTATTTCCACATCTAATTGAACGGAATTTTCACAATAAGTATGAAGCGTATTACGGAGTTCCGCCAAGCGACCGACTGTTGATTAAACCTGTCAATGTTCGGAAAAGCGATCGCGTTGTAACGGTTTTTAAGGGTTTTTACATTACGGCATGGAAAGGACGGTATAAGCTTATCTCCTCCCCGGAAAATTTAACGTTTTTATACCGTGTGGGCATCGGTGGACGAAATTCACAAGGATTTGGCATGTTCCGTCTTGCAAAAACAAAGTGAAAAATTTCACAACTGTCGTCGACCTCCAATCCTGCAAAAATCCTAGGAGATCGACGACAGCCCACGTTTTGCGATTTTCCCCGAAGCATCAATGGATAGAAAATATTGACCGAATTTTAAAACATATGTATAATGACGTTGTATATCTTTTCCATGTATTGATGTATCAGTACTTTTTTGGGG # Right flank : CTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //