Array 1 1346-84 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSPQ010000013.1 Phocaeicola sp. Sa1YUN3 c_000000000016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ========================================================================================================================================================================= ================== 1345 47 91.5 169 ...A..............T..............T....A........ CCTGCATTTCATGAGGCTGCTATAACGTAAAAAGGCACTGCCCCGTCTCTTCCCTGTGTGCTTTCGCGCGGGACAACTGCGGGCAATGCCTTCTGTGTAGGCAAATATAGTTATTAAAAACCAATTATCAAACAATTCACCATGAATATTTCAGAATTCAAGAAACTGT 1129 47 100.0 30 ............................................... CAACAGACATGTCAAGATACATGAAGTCGC 1052 47 100.0 30 ............................................... CAACAGACATGTCAAGATACATGAAGTCGC 975 47 100.0 30 ............................................... TGGGTGAGGTAGCACTTCTCGTCTGCCTTT 898 47 100.0 30 ............................................... ACCAATACCTGAGCCAATTCCAGCAAGACC 821 47 100.0 30 ............................................... TTGGGTCTCTTGGTTGTCGCATGTGATTCG 744 47 100.0 30 ............................................... AAAAACGGTACTAATCCATAAAAAAGATTT 667 47 100.0 30 ............................................... TACAAGAATCATGAACAAAGGGTGTCCGTT 590 47 100.0 30 ............................................... ACAGGCTTGCCGGTCAAACGGTCAACCATG 513 47 100.0 30 ............................................... TGGGTGAGGTAGCACTTCTCGTCTGCTTTC 436 47 100.0 29 ............................................... CAAAACGTTATCGTACCTCAACAACTAGA 360 47 100.0 30 ............................................... TTGCTGCATCACCAGCAGCTACAGTACCAG 283 47 100.0 30 ............................................... TTTTGGGCTTAATTCCAACCCTTTGTAATT 206 47 100.0 29 ............................................... TTTTGCTGTTTCAGGACTGCTTACATCGT 130 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ========================================================================================================================================================================= ================== 15 47 99.4 40 GTTGTGATTTGCTTTCAAATTAGTATCTTTGTCCTATTGGAAACAGC # Left flank : AAAAGAAAGCCGTATATATCCCCTCAAAAACGCAACCGTTAGTGTTACCCATTCCATGCGGATGCGTTACCCATTTCTACCCATACTGTTACCCCGTTCTACCGTTAGCGTTTTTCAAGCTCTCGAACAAGCGGGAGGGAGGGGATGATAGACTTATCCACCTTTAACTTCATTGAAAAGAACTTCATATACACGGATCTTCGGTGTTATTCATTTGTCATTCAATTTTAAAATTGTATATTTGTGACGAAGTCCTGACTGAGCGGAGTAATCAAGCGTGCCAACACCTCGGGGGCGATGGGGCCACGTGAAGGCTGATAATGACAGCGCGCAGGCAGGATGAACCCCAAGTTGGGATATGACACCGGCTATCCAATCCGGACTGGCGGAGAGCCACGGGCTGGCTTCCCTTTACGGGCCGGACGGACGCAAGGACATATCTCAGCGTTTTTTTGCCAGCAGCCCCATCAACGTTGGTCTCATATCCTCCTTTTCATATA # Right flank : CGTTTAGTCGTAAGCATTCGGTAAACCACGTTGCAAATTTTGTGAATTAGTTCCGAATCGGTGTTATTTGTAGTCGATTCGGAA # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.92, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGTCCTATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //