Array 1 2539438-2538449 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOZA010000001.1 Acinetobacter sp. BIGb0196 Ga0373776_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2539437 28 100.0 32 ............................ ATTTGTAAATGACACTCCTGCAAGCAAATTTC 2539377 28 100.0 32 ............................ TAATTGTGGTGGTGAGGATCGTTTTCGCTTTG 2539317 28 100.0 32 ............................ TTTCATGCCATTATTGTTGACAATGGCGTTTG 2539257 28 100.0 32 ............................ ACACGAAGAAAAGAAACGCATTGCTTTAGAGC 2539197 28 100.0 32 ............................ TTTTTTAATAAGGAGAGAATATCAGATTTTAT 2539137 28 100.0 32 ............................ AAGCTGACGAGCCTTAAGGATTACATTTCTAT 2539077 28 100.0 32 ............................ TGCATATCGGTTAATCTTAGCTATAGCTTGCT 2539017 28 100.0 32 ............................ TGAACAGATTCAGCAACAAATTCAAGATGCAG 2538957 28 100.0 33 ............................ CTCTCCAATAAAATTTTCATTTATATATACATT 2538896 28 100.0 32 ............................ GAAGCGTCAGAAGTCTTGGTAAATGAGGATAT 2538836 28 100.0 32 ............................ TTTTGATTGAGCAGGCAATAGCGGATCAGCAG 2538776 28 100.0 32 ............................ ATTATTTACGGGCTGGTTCTGGTAACGTTGCT 2538716 28 100.0 32 ............................ CCGAACACTGATAAAGGCTTGACCAAAGATGA 2538656 28 100.0 32 ............................ AAGATCATGAAGAGCGAAGACACCCAGGTCCG 2538596 28 92.9 32 CC.......................... AAATGCTTGATCACCCGTCAACGTAACCCATT 2538536 28 100.0 32 ............................ TGATTCATAAGTAAGTAAGTCGCGTTGACGAA 2538476 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.4 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : TGATAAAAGCGCTACTCCTACGATGCAAAAACCACATACGATTGTAAATCTAGCAAGCAATTATCAAGTGAATGATAAGCTCACTGTACGTGGTGGCTTTACTAATTTACTTGATAAAAAATTGTCAAATGGTGCAGACGCATACTTCGTTGAGCGTCAAAAAGTATTTGTAGGCGCAACCTTTAAATTTTAATCAATCATACTGAAGTGAAAACTCACTTCAGTAATAAATCATGCGTTATGAAAACCATCTGCGGATGGTTTTTTGCTATGTATTTTTTATTTGGATGGATGGAATGCTGTGTATGAAATAGTGAAAACAATGATTTTTTAGGGTTTAGGTATTCTTCTATTCGTACCAAAATTTCCCCCAATATTTTTTGATCATTTTATAGGTTAATAAAATCAGTTGGTTATATATGTTTTAAAAAACTTTGGGTATTTTATGGTTTTTATATTTAACTTGCTGTTATCAGGGTGTTTTTTGATTTAAAATTATA # Right flank : TCAACGGAAGAACTAGATGAGATTTACTGCTAGACCAGCAGAGGCGTTTATTTTAGTTATCTTGATAATATTTGAATTTGTAGAGAAAGCTACCTTAACGGTAACTTTCTCTACATCTAACTCATTGGTTTATTTTAAGCTAAATCAATGTTTAGCTAATTATAAATAGGTTTCAGAATTACCAATCGTATTTTAACCCCACTCTAAAATTAGTTGGTGCACCGTAGTAACTATTCGTTGTGGCTAAATGATATTTTTCATTAAACAAGTTATTGATATTTAAATTCAGCAATAAATTTTTATTGATTTTATAACGTGCCATTAAATCAACCAAAGTATAGCTGTCTTGGGTAAAACGAGTCTTTACAGGGAGCGTTATATCAGAATAAATATCACTTTGCCAACGTAGGCCACCACCTATTGTTAGAGCTTGATCAAAGTAAGGTAGAGTATAGGTACTAAATAATTTAGCAGTATTATTTGGAATGTTGGTGTTTATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1482561-1485353 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOZA010000002.1 Acinetobacter sp. BIGb0196 Ga0373776_02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1482561 28 100.0 32 ............................ ATATGATTTGTGAGGATGATGGCAATTGGGAG 1482621 28 100.0 32 ............................ ATACGAATAAGGGCATCAATATCTAGGAATAT 1482681 28 100.0 32 ............................ TGATGTCTGAGACAGTAAATCTAAAGCTGTTT 1482741 28 100.0 33 ............................ AACTTTATTAATGATGAATCTGAGCACGTTATT 1482802 28 100.0 32 ............................ AGTAATCAATTGATACTGAAAATCGTGAGACG 1482862 28 100.0 32 ............................ TTCCAGTCATCACCCTTGTCCAAACAAAAGAT 1482922 28 100.0 32 ............................ TGAAGCTAAAACTAATCTTCTAATCTCATCAT 1482982 28 100.0 32 ............................ TGTCCACTTTTTAACTGTAATTTCAGGTATAG 1483042 28 100.0 32 ............................ TAAAGGGTGGCAAACGCAGTCGAAGCCTGTTG 1483102 28 100.0 32 ............................ TCCACAATCTCTCTCATCTGCTCAATAGTCAG 1483162 28 100.0 32 ............................ TATCTTGTCTTTTTGCATCCAAATCAAAGAAA 1483222 28 100.0 32 ............................ AAATCAAAACAGAACTTCTTGAAGCCTTAAAA 1483282 28 100.0 32 ............................ TACAAGAACGTTTAAATCTTGATTTGCATAGC 1483342 28 100.0 32 ............................ TTTGATTGCGCTTTCATTGATTGAGTAATCAA 1483402 28 100.0 32 ............................ TGATCAAACACTTGTCTATGATTCAGCAGCAA 1483462 28 100.0 32 ............................ AATAGTTACCGTACTTGTAAGACCGCATAAAG 1483522 28 100.0 32 ............................ TTGAACAGAACGGATTTGCTGAATGGCGAGAC 1483582 28 100.0 32 ............................ GATGTTAGTTGGCTGGATACGGTAGCCAGATG 1483642 28 100.0 32 ............................ TCTACAGGCTCATGCTTAATGTATTCGTCTGC 1483702 28 100.0 32 ............................ GATCAAATAGCTTGACTGCTACAGCTTCACCT 1483762 28 100.0 32 ............................ GTATTATGCTTAACGCTGGATATGGTGATGAT 1483822 28 100.0 33 ............................ ATTCTTAGTGATGTACTTGTATAGAAGTAAGGA 1483883 28 100.0 32 ............................ AAATAAAAAACTACCACACGTTGCACCAGGCA 1483943 28 100.0 32 ............................ AGCTGATCAGCCTTGTTTTGATCAATGTTGTC 1484003 28 100.0 32 ............................ ATATAATTCGATTAGTTTTGAAGCTAATTTAG 1484063 28 100.0 32 ............................ ATGATAGAACCGTCTTTATTTTGCACTACACC 1484123 28 100.0 32 ............................ AGTGGTTGGTGCTATATCTAGCTCTAATGAGG 1484183 28 100.0 32 ............................ GTTATAAATATGGGATCATCAGGACTAAGCAA 1484243 28 100.0 33 ............................ TCTATACGAAGCACCACCGAGAGTAAACATCCC 1484304 28 100.0 32 ............................ TTGTTTTGATCAATGTTGTCTTTAAGACCTTT 1484364 28 100.0 32 ............................ TAACTAAAACTGAGGTGGCTTAAAAATGGAAA 1484424 28 100.0 32 ............................ ACATCGAAGGTTGATTATCTTTAGAGTAATAA 1484484 28 100.0 32 ............................ AAAAGGGAAAAACGAAAGTTATGATTTTAAGT 1484544 28 100.0 32 ............................ ATAGTACTTTTTATTATGGGTTATATTTTTGT 1484604 28 100.0 32 ............................ TCAATGTATCCACGCTTCTGATGATCAGCACA 1484664 28 100.0 32 ............................ ATTTGAGCAAGCATTGCGTGAATGGGGCAACA 1484724 28 100.0 32 ............................ AAAACATCAGTATCTACGAGCGCTTTTACTGA 1484784 28 100.0 33 ............................ TCTGATAAATTTTCAAGTGATGCAGACTTTGCA 1484845 28 100.0 32 ............................ ATTCATAAAGTTTGTTATTTTCTATTTTTGAA 1484905 28 100.0 32 ............................ AACTCTTCAGCGTAATTTTTCTATAAATGAAA 1484965 28 100.0 32 ............................ AAACATTTAAAGACTGAGGATCCGGATTTTAC 1485025 28 100.0 32 ............................ AGATTAGCTGTTGACAAGACGATCTTCGGTTT 1485085 28 100.0 32 ............................ TGCTGCATGTGCATTGGTAAATGAATTAAAAT 1485145 28 100.0 32 ............................ AATTTCCTAAAGTTGTGTATGAGCCAGCACCT 1485205 28 100.0 33 ............................ TGACGCAAACTTCTGCAAATTTGGATCAGACAT 1485266 28 96.4 32 ..........G................. GTCTGGAATGACAACAGAAGCGCTCCAAGTAA 1485326 28 96.4 0 ..........G................. | ========== ====== ====== ====== ============================ ================================= ================== 47 28 99.8 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : GATATACCAAAGTGGCTTGAGCGTTTGGTTGATTATATTCATATCAGTTCTATTAAAGAAGTGCCTGAAAGTAAAATTACTGGTTATGCAATTTATAAACGTAAACAAGTTAAAACCAACGCTGAGCGTTTGGCACGCCATCGAATGAAAAGAGGGGATATAGGCTTTGACGAAGCATTGAATCGTTATCGCCAAGTGGTGACAACAACTGATTTGCCTTATGTACAGATGCTAAGTTTAAGTACATCGAATGAACAAGATAAAAAGCGTTTTAAGCTATTTATAGAAAAGCAAATCACTGAAAAATCTGAAATTCAGGTTTTTAGTACATATGGGTTAAGTTCTGTGTCTACAGTACCTGAGTTTTAACCCAATATTTTTTCACTCTTTAACAGTTTAATAAAATCAATAAGTTATGATTGTGGGTTAAAACTTTGGTCTTTTATAGGTTTTTAGTCTTAACTCACTGTTATAACTTTATTTTTTGTTTTAAAATTATA # Right flank : ATTCGTAAAGGTTCAAAAGTTTACATTGATGGGGCTTTTTTTAATTCCAATTTATTCGTTTTTCAGGAAAAGCGTATACTGAGCTTAACTTAGGTTCGGTTTGTAATTTACCGAAATACTCAAGCTTTTGTTCATCCTCAATATCAAAGCGTTTCATCCATGCTTCAGCTCGATAACCTTTCAGTAAAGGATTCTGCTCAGTATCGTAGTTACCACGATGTAAGGTCTGAATTTTACTTATTCGTAAAGACTTTAAAATGCGGTTTAATAACACATAAGGTGCTGGTAGAGCATCTTCCTCTATAGAACCACTTAGAGGCTTTGTTCCAGCTTGTATAATCACACCTGAACCATAGTCATATCCTATAAACCAGTTCATCGGCAATTCACTATTTAAAGCTTCTTCGTTCTTAATTTTATTAAACCATTCATAATTGATCGCTGTAAGCCAACTGACAGTTTTGATGCCATTTATTAACTTATTTGAATCTAAATATGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1488102-1488368 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOZA010000002.1 Acinetobacter sp. BIGb0196 Ga0373776_02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1488102 28 96.4 32 ..........G................. AGATAGTATGACCAAGAAAAATTGGTTTAACT 1488162 28 89.3 32 .....T....GT................ ACCATAAACAACACCCTCAACTGCTGCGTCAT 1488222 28 100.0 32 ............................ TTTGCCTCAAGACTGCGATTGGAGAAAGACTC 1488282 28 100.0 32 ............................ TGTAGACGGTTTCTACCACCACAGTCGTGCTA 1488342 27 89.3 0 ..C........T............-... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.0 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : CCTTCAGATATTGGGAAAAGCCCTTTACATTTTGGACAAGCAACCATATAGCCTTTGCCAGCCATCCCAATCCCATTGACGGACATTGTAGGATGCCCTTGCATCACCACACCACCATGATCTGTTTTACAACCTTGAACAATAACTGCTTGGGTCATATTTATTCTCTTATTATGTAGATTTTATGAAAACTCTTTATATAAAAACACACAAAATTAATATACCTTAATTATTGGTGATGGACAAAGTATCAACCTTGCTAAACTGGGTCTATTTAATATCAAATAATTGTTATGACCATGCTAAAAGCAAACTAAACATGTAATATTATGCCAGTTGGTGAAAATTTGGAAAAATTTCAATAAATTATAAAAGAGAGTTCGACTAAAAGAAGCGTGTAGTTGCTTCAGTTTTGGTATGTTTTTCCATTAATAATCAACTAACGATAGAATCAAACTCAAGATAATTAGAAGCCCAAAGTAATGTAAATGCTTTATTTG # Right flank : ATAAGCCAACAATACACACATATTAATATGTTAACTATTTCACATTTTAATTGGAGAAAATATTTATATGATTTTTAACATTAAAAAAATTGAATATTGTAAAGAAAAATAAAATATTCATTCCTTAAACTCATATGTAAATATAATTATTAATTGTCTTGAGAGTATCTTTTGGCATATGTTGGTCAGTGGAAATTCTAAATTTAAGCCAAATATCCGTTAGTAAAATAGTAGCTAAAGCATGGCTACTCCTTGATCTTTGGACTTTGTAATGGGATGGAGGTGAGTTGTGATATCGCCGTTTTCTTGCATAAATTTCCAAAAACACACAGCAAATTTCCTGATCAAATGACATAGAGTGATGGTTTATCTGCACGTGACTAATTCAAAATTTAAGGTGAAATAATGTGAATTTTGTTTTTATGTAAAAAATTTACAAAAAAAAATACTTTAAATAAAACTGAAATATGAATGTAATAAATATTTAATATATTGAAATA # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //