Array 1 53908-54919 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWHT01000001.1 Enterobacter chengduensis strain WCHECh090071 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================ ================== 53908 28 100.0 32 ............................ AGGAAGGGGAATTGACCACGGTCAAAGAGGTA 53968 28 100.0 32 ............................ TTGACTTTAATCATTCTGCTTTCCGTGACGTC 54028 28 100.0 32 ............................ GCCAGCAGAATAAGGTTCAGACTCTAAATAAG 54088 28 100.0 32 ............................ CTGCCGGGGGCTGCTCTGGCGCCTGCGGCGCC 54148 28 100.0 32 ............................ AACAAGGTATTCCGCGGATGTTCTCAAGACAA 54208 28 100.0 33 ............................ TCTGCTGGCTGGCTAACAACCTGCATCATTGCC 54269 28 100.0 32 ............................ TCTTCATTTGGTCATAACCTCTTTTTTTAGTT 54329 28 100.0 32 ............................ TGGCCGCCGTCGCTAAGCAGCACGCTATCTCT 54389 28 100.0 32 ............................ GACCGGCTCCGTCGTGGACTGGGCGAAATGGT 54449 28 100.0 33 ............................ CTGAAGGTATGGGAGAAGAACGGTTATCGCCGC 54510 28 100.0 33 ............................ GGATTGGTCGGCACTTTCGGCGCAAACTGTGAT 54571 28 100.0 33 ............................ TGTCCAGCTCCAGTTCTCCCAGGATGGACTTGA 54632 28 100.0 32 ............................ CAGCGCGGTGCCGTACCACGTCAGCCGCAGCA 54692 28 100.0 32 ............................ GTACGAGACTGGTGGGCCTTCGCTGAGAAATT 54752 28 82.1 112 .....................AATC.C. CCTGGTTATGTCAAACACTGTGCCGCCTGATTATAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAAATAGCCAACATGGGGAAAGTAGGAACAGAGTCAATTAAGTTTT 54892 28 82.1 0 .....................AATC.C. | ========== ====== ====== ====== ============================ ================================================================================================================ ================== 16 28 97.8 38 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACGGTTTGCACAAGCTTTTTGGCGGCGTGGGCTTTATTAGCGGCATGCTGGTGGAAAAAGGATTGCCGGGATTTATCGCCTACGGCGTGTTGGTTGGTGAAGTGGTTGCGCCGATCCTGATTATTATCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATTGTGGCGTGGCTGATGGTGGGAATGGGTGAAACGCTCGCCCTCGATAAGGTAGGTGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGTTTTGCGCTGGGGAAAGACCCGGCGTGGCGTTGAGGTTTGGGCTATGGCATGAAGGAAGGGGTCTACGGACCCTTTTTTATTGGTGATTTTTAACTCATTGATTTTATTGGGCTGAAATATATGCGAAGAAAAAGGGGTTGAGACGATTTTTTAGGTAATTTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : ACCTGGTTCTGTCAAACACTGCGCCCCCTGATTATAAACCCGGTGGCGCTGACGCTTACCGGGCCTACGAAGAGCCAACATGGGGAAAGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAACGGCGGCACCGCGTCAGATTATGCGAGGACCAAATCCCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCCGACAGCGTCATGGTGCTGGTGACGGTATACTCCCCGGAAACTACCTTCGTCTTACAGCAGCCGCACACGCCGGCGCGGCAGGCGGCCACGACAGGCACCTTGTTGCTTTCCAGCGCCTCCAGCAGCGTGGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTGAACTGAATCCCGCTGGTTGCCGCCTCCGCCACGGGCGTGAAGAACAGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCTTTCACTTCTTTCTCTACGCTGTCCATGTACGGC # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.45, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 71770-72878 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWHT01000001.1 Enterobacter chengduensis strain WCHECh090071 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 71770 28 100.0 33 ............................ CTGGGTTAAACTCCATGCCTCGCTTCTCTACGT 71831 28 100.0 32 ............................ GTAACCGGGATTAAAACGTCGCCGACCAGCTT 71891 28 100.0 32 ............................ CCAGGCTGATACTGCGTTACCAGTGCCGGACA 71951 28 100.0 32 ............................ GATACACCCAGGCATGGGGTTTCTATCGTGGT 72011 28 100.0 32 ............................ ACAACCATTTTTGATAATTCATTTTCTACCTC 72071 28 100.0 31 ............................ AAAAGCAAGCGGTGACGCGCAGAGCCAGGAG 72130 28 100.0 32 ............................ ATCACCGCAACAGCGAGAACGGCAAGTTAGCA 72190 28 100.0 32 ............................ TACTCGCTCAAGTTGTTTCGTTGATACGTGGT 72250 28 100.0 33 ............................ CCTGAACCAGTCAGCGCCGCTGTATGCCCCGAA 72311 28 100.0 33 ............................ AGTACAATACGGGGCCTGGCCAACACCGGCGAT 72372 28 100.0 32 ............................ CGCCGCTGGCGTTAATTGTAATTGTCATATTG 72432 28 100.0 32 ............................ CCCTCGTTTCTCTGCAATAACTTTGGCTATCC 72492 28 100.0 32 ............................ ATTCGAATCTCTGACTACAAGCGAAACATTGA 72552 28 100.0 31 ............................ TCGCACCACAACCCAATACGAGCCATAGCCT 72611 28 100.0 32 ............................ TGTCAAAACTCCAGTTTGAAACCAACGACAAG 72671 28 100.0 32 ............................ TGACCAGGCAGCTCGCCGCGCTGTCAGCTGAA 72731 28 92.9 32 ...T.............T.......... AATAACTGCTGCGCTCGATCGGCTGGTGGGTA 72791 28 100.0 32 ............................ ATCGAAACGAAACATCGACAACTGAGCGAAGT 72851 28 67.9 0 ...........C......T..CCCTCTC | ========== ====== ====== ====== ============================ ================================= ================== 19 28 97.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCCCAAACGCATCCCGTATGCCGCTGTCTTGGAGCCTGGCTGGAAGAGGTGAAATCCGGGCTTACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGTGGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACCGAAACGAAATGCGACTACTGTCGGGCGTTAAACCATGTGCTGCTGGTGGCGAATTTTGACGGCGATATGTTGCCGCACATCACGGGGCTACTCCATGACATTACGCATTCTATGGCCGCAGACGTTGTTGCCCCTCGAAATGCAGAACCGGTAATTCACATTATTTCCTGAGTTCGAGCCCAGGCGTCGGGGGCATTTCTCTGACGCCGTTGCTGTAACCCTTTTTTTTGATGTATACGTAACGTATTGATTTATATGATGAGGATTTACGTGCCAGAAAAAAGGGTTTTATACGTGTAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTCGTTTCTTTCCA # Right flank : CAAACCAACCCACCGTATAATATTCACCAAACCAATTTAAAACCTAATCCCATCAAACCTGCACTCTCTATTTTCACAATAAATAAAAAACCCATTCATGCATGAATTATATTCTAACGAATATATTATTCGCAAAAATAATACTTCAGCTAAAAACATGATTTTCCACTTCATTATCACGGTGATTATTATTCATTTGATACCCGTCACATTTGTTTCCATCCGATGTTCGCTAACATATTGCGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAAGAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTATCTGGAGAAATGTCGTGTTCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGACAAGAGTCGTTTTACTGGAATATTCCCATCGCGAATACGACTGCGGTGATGCTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGCGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 82368-83051 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWHT01000001.1 Enterobacter chengduensis strain WCHECh090071 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 82368 28 100.0 32 ............................ TCATCTTGTTTCGCTCGTTTACCAGGTCTACT 82428 28 100.0 32 ............................ GTGGGACAAGGTGACGCAGTCGGTACGCCATA 82488 28 100.0 32 ............................ ACTTTAGAGAGAATCTGGGTAAAGCCCGTCAT 82548 28 100.0 32 ............................ ATTGACCGTCTTTCTCGTTCAACGATGGACTT 82608 28 100.0 32 ............................ TGATACAATCTTTCGGCAAATGTACCGATTAA 82668 28 100.0 32 ............................ GTCAGGGCATGGTGTGCAAACTAGCGGGGCGA 82728 28 100.0 32 ............................ TGCAATGCGACAGGGACCAGGAGAATATTCGG 82788 28 96.4 32 ...........A................ GCACGTTTGATGCCCGGACGCGACGCGCCCGC 82848 28 100.0 32 ............................ GACAGACGGGCGCGACTGCTTCGACTGATAGA 82908 28 92.9 30 ............G.........C..... AGGGAATGGTCACCATCACCACAGAAGAAA 82966 28 92.9 30 ..............CC............ ATAGAAAATAAGGTCTCTTCCCCTTACTTT C [82991] 83025 27 75.0 0 C.A.....T..A....A....C.-.... | ========== ====== ====== ====== ============================ ================================ ================== 12 28 96.4 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCTACGTTACGTTCATTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGGATATTGTCGAGCACGCTGACGGGTAACCCCTGATTGAGAAACTCAATCAGCCGCATACCCCTGTTTGCAGGTAAACCAGCGTACCGCCAAAGCGCGTTATCAGCAGGTTGTTGGGCGGGGATCCATGTTCTCATGTTACCTCCTGGTGAGTGTCATTTGTCATGGCTAAGTATAGTCATTTGTCAGGTGGAGTGGAATGGCGTTTTTTTATACTGGGTGGTTTAAGAGAAGATGGCGTTTGACCCTAATTTTTAGGGTGTTTGTAATGCATTGATATTAAATGGATATTTGAGAGGGTAAAAAAGAGGGTAAAAGAAGGGGTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGAAGATATTATTTCA # Right flank : ACGAACCGCCAAATAATTGTTCAAATAATCGACTGCACCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCATTTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAGGATA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //