Array 1 5557-6180 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WJCQ01000099.1 Bacillus thuringiensis strain 4L1 NODE_99_length_18503_cov_230.626669, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
      5557	    32	 100.0	    34	................................	ACAAGATACGAGAATTTAATGACGTCACCCACAT 	
      5623	    32	 100.0	    34	................................	TATTGTTACACCTTTAGAGTATCCGAGTAAAAAA 	
      5689	    32	 100.0	    34	................................	TGGGTGGCAATGTTTGCGTTATTAGTTCCGAGTG 	
      5755	    32	 100.0	    35	................................	ACAATGGGAAAGTGTTAGGTTATGCACGTTTTAAA	
      5822	    32	 100.0	    33	................................	TAGGAGTTATTAATGGCTTTAGATGTTAGACCA  	
      5887	    32	  90.6	    34	.........T.........T.A..........	TACCTCGGGTTTATATTTATCTGGAATGCCCATA 	
      5953	    32	  93.8	    33	........CT......................	TTTGCAACTAGCTCAATTGTTTTTCCGTTTTCA  	
      6018	    32	  96.9	    34	....................A...........	TACCTCGGGTTTATATTTATCTGGAACGCTCATA 	
      6084	    32	  90.6	    33	.........T.A.......T............	ATAATATCACAATTTTGACAAAATTCAGTCATG  	
      6149	    32	  90.6	     0	A.T.................T...........	|                                  	
==========	======	======	======	================================	===================================	==================
        10	    32	  96.2	    34	GTCGCACCTCATATAGGTGCGTGGATTGAAAT	                                   	       

# Left flank :   ATTGAAAATGGAGAAACAGAGAATTTATATCCAGGGATTAATAAACAAGGAATAAGAACATTTTACACGAAACATTCTACAGATGTTGAGAATGAGGTTGCTACTGCGATTCATGTGTACGTTGATGTATTAAAACAAATGAAGCGTGAAGGTGCTGAATTAGCAAGGAAGAAGTAGAACGATGTGATTAGAAGATTTAATAAATAAAATTCTTCATCATATTATAAAACTATACATTCTTGTTTATTAGTTAGCTAATAGCTATGAAAATAAAATTAAATATATCGGTGTACAAGAATGAATTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAATGTATAGCAAACATGAAATTCCTAGTACATTCGCACCTAGAATTCTCATAATGTATGATGGGGATTTATGATTTTTATACAAAATACTTTAATAAATAAAAATATTTTTATATTTTTGAATAGAATTAACGTATTTGTGATTGATTTTGAGCACAAATCGGT
# Right flank :  TAGTTTAGTAGATACTCAACTAGAAGTATCTATATCTGCAGTATCTAATACAAAAGTAAACAGTATAAAATGGAGGGAGATTGAATGACCTACATTGCTCATATACGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAGCATTTATTAAGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCCGGTATGCTCCATGATATGGGGAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAAGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCTATTATTTCTCACCACGGATACCTTCAAGATTTTTTAAATCCAGATTTAGAATCGCCCTATTTAAATAGAGTGCGAGATAAGCAATT

# Questionable array : NO	 Score: 8.99
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTCATATAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.20,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.41,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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