Array 1 7280-9087 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAIX01000050.1 Legionella pneumophila strain D4954 D4954_49, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 7280 36 100.0 35 .................................... AAAAATAAGAATCATGGTCACGCTCCTAATTGATT 7351 36 100.0 36 .................................... ACTACTGTTTTATTATCGTTGCTCTAATCGCTTTAA 7423 36 100.0 33 .................................... ATAAACTATAATTTCCACAACACAATAAACTAT 7492 36 100.0 35 .................................... ATGTAAATAAATGATTACGTAACGCCGTTTCAATT 7563 36 100.0 36 .................................... ATGTCTCTGCTTGGAACTGTTCTCTCCCCATTTCAA 7635 36 100.0 36 .................................... TCTGTTCACCCTACACAAAAGCCCGTAGCTTTAATG 7707 36 100.0 35 .................................... CTTGATGTATGGCGCATACAAGCAGACGACGACAC 7778 36 100.0 35 .................................... TTTAACACATATTGATAGGCGTCTTTCTCTACGCA 7849 36 100.0 34 .................................... GAAGGTATGATGAGGATATCTGCTTTAGAGTGGT 7919 36 100.0 36 .................................... CCTGTAATTGCAGGTAAGGCTTTATTGACAGTTAAA 7991 36 100.0 33 .................................... TTTCTATGTTCAGTTTTCCAATTTATTATTGAC 8060 36 100.0 34 .................................... CCATAAGCCCCATCAAGATGGAAATTGCCCAGAT 8130 36 100.0 35 .................................... GTAAATACAACATGGTTACTAACTTACCGTGCTAC 8201 36 100.0 35 .................................... ACCGTGTCGGAACTTGCCCAAATCACGCCAAAACT 8272 36 100.0 34 .................................... GTGACATATTAGAAACCATGGCTCCAAAGCTATA 8342 36 100.0 36 .................................... GTTTATTAATGAATAGTTGCATTTTGTGCAGCAAAA 8414 36 100.0 33 .................................... GTTTAAACGGGCTTATTTACACCTAGTTCTGCT 8483 36 100.0 35 .................................... CGGTATTAAAACCTACATGGAAAGGTATAATGTAT 8554 36 100.0 34 .................................... ATCTCATATCCAGCCTCTAAATTTTTTAGTAAAA 8624 36 100.0 34 .................................... CAAGTAAATAACCTCTAAGGTTAATTTTGTATAT 8694 36 100.0 36 .................................... AGAATTAAGCACAAAGTATATAAATTATAAAGACAA 8766 36 100.0 35 .................................... ATCCCGAAAATCAAAATTTAGCATTTCCACGCACA 8837 36 100.0 36 .................................... TAATAGGATTATATGTAGGTAATTTACGATAATGAA 8909 36 100.0 36 .................................... TCGAAAGAAATGATTCGAAGCGCAGCGAATGGGGTC 8981 36 100.0 35 .................................... CTGTCGGCATAACTCTGTATATCTCTGTGTAGGCC 9052 36 86.1 0 ......................TT...T.A.....T | ========== ====== ====== ====== ==================================== ==================================== ================== 26 36 99.5 35 CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGCTAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //