Array 1 795065-792993 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZRZ010000001.1 Enterobacter roggenkampii strain ECC127 NODE_1_length_1317760_cov_104.920637, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 795064 28 100.0 32 ............................ CCTCCGTTCGTCAGCATTTCGAACATGATCCG 795004 28 100.0 32 ............................ TGATGGCCGGACTACTCATGCCCGGCGCTCAG 794944 28 100.0 32 ............................ ACCGCGATGTACAGCAATGACCCAGGCCACGA 794884 28 100.0 32 ............................ AGCCTGAAAGTTTCGGAATGCCTGTGGGTCTG 794824 28 100.0 32 ............................ ATCGATTGAGTAATATTCATTTTCATCAGTCA 794764 28 100.0 32 ............................ TTACCTGAAACTCTACCGGGCGAATTATCCTG 794704 28 100.0 33 ............................ TCCCGAGGCTGTCGTGGTCTGGCAGGACCATGA 794643 28 100.0 32 ............................ TATACCGAAATGAAGCTGCAGATGGCGGCAGC 794583 28 100.0 32 ............................ CCGGTCAGCTGCACGGAACAGCTCGGCCTCGA 794523 28 100.0 32 ............................ TGGCGCAAATCGTCAGCACGCTGGCGCAGCCG 794463 28 100.0 32 ............................ CAAAGGTCGAGCCTGAGCCGGATATGTGGGAT 794403 28 100.0 32 ............................ TACATTCGTTAGGATCTAAAACAATATATTCC 794343 28 100.0 32 ............................ TCAATGAATTCAATTAATTCTTCCATCAATAC 794283 28 100.0 33 ............................ CTCCACGCAAGCGCAATTAGCGCCTTCGCCTGG 794222 28 100.0 33 ............................ GCAAAGTCCAGAGCGCTCCCGGTCAGTTGGGAA 794161 28 100.0 32 ............................ TTAAAGGCGCGATCAGTAACAGCCGGTGCATG 794101 28 100.0 31 ............................ CGTCGGAAAAAAATAAAGACTGTAACTACCT 794042 28 100.0 32 ............................ TGAAGATATTCAGTAAGGGAGATCTCGCCCTC 793982 28 100.0 32 ............................ TCAGCGCTACAACAAGATCCGCGCGGAATTCA 793922 28 100.0 32 ............................ GGTCAGCAGCTCTTTGCGGTAATTCAGGATAT 793862 28 100.0 32 ............................ GGTTCGGTGCAGTGGTCATTAACTGCGGTTGT 793802 28 100.0 32 ............................ TTCGAGGTCAGCGAAGTCTGGCAGGATGAAGT 793742 28 100.0 32 ............................ AACACGGTATAAGTAGTTTCCAGGGTCATGCC 793682 28 100.0 33 ............................ GAAGACTCCAGCAATACATTCTTGATAAATCAT 793621 28 96.4 32 ................A........... TGGTGATGCTCTGCAATCAGCGGGACAACGGT 793561 28 100.0 32 ............................ CAAACTCCGCAATTTGTTTTTCTGTCAATGGG 793501 28 100.0 33 ............................ ATAACATTAAGAGATGTTCCGGCAGCAGTACCG 793440 28 100.0 32 ............................ CACTCGGTCTGGCCGCAACTGCCACGCCTGAC 793380 28 100.0 32 ............................ AGTACGTCCTCGACGAACAGCTTGCTGCGAAA 793320 28 100.0 32 ............................ GCACAACACGGAAACAAACCACCTTAACGCTG 793260 28 100.0 32 ............................ TACTCCGTACCTGGTTACATTGACCACTTCTA 793200 28 96.4 32 ..T......................... GTACTCGATACCCTCAAAACCGAATTTAAGCT 793140 28 100.0 32 ............................ GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 793080 28 85.7 31 A..........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [793055] 793020 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 35 28 98.7 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGTGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGGCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGCCGTCCACTCGTGGATGTTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTAATGTCATTTGTCATGGGTAAGTATAGCCATTTGTCATGGTGGATGGAATCGGTGTTTTTGTGAGGGGGATTGATGCGAAGAAAGGTGTTTTGACCCTAATTTTTAGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAAGAGGGTTAGAGAGGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGGGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACTGCGACACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAACA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 805311-804561 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZRZ010000001.1 Enterobacter roggenkampii strain ECC127 NODE_1_length_1317760_cov_104.920637, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 805310 28 100.0 32 ............................ CAGAACGGATCGGATTGCACGCGCTTGAACAG 805250 28 100.0 32 ............................ TTGCGAAACCGGTGACCGCGGCGAACTGACCC 805190 28 100.0 32 ............................ GGACATGGCAGGACGTCAGGGTAATCAGTCAC 805130 28 100.0 32 ............................ ATGAGCGTGGCTAGTTCTTTTGTCATTGCAAA 805070 28 100.0 32 ............................ ATTGTCGCAGGCTTTTCTTTTGAGTCGGCTGC 805010 28 100.0 32 ............................ CAGGTGATAATGTGGACGGGCTAATTTCGAGC 804950 28 100.0 33 ............................ TTGGTCAAATAAGCGCAAGGTTAAACCCTTATT 804889 28 100.0 32 ............................ TCTGCCGCGTCTGTTTTCCTCGCCTCACGCGG 804829 28 100.0 32 ............................ CAGTGAAGCATTCATAGCCCGAGAGGTTTTAC 804769 28 100.0 32 ............................ TGATGAAGGCAGGCGAGAAAACAGAAGAGTAT 804709 28 100.0 32 ............................ TCCTTCGCCATTGCAGTAAAGGACTGTGTGAG 804649 28 100.0 33 ............................ AAGCGGGGTAGCAGAATATCGAGCCAGCGCAGT 804588 28 78.6 0 ...........C.........AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 13 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCACAAACGCAGCCCGTATGTCGTTGCCTTGGGGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACTGCGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACCTTTTGATTTATATAATGCTAATTTACGAACCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTTTAACAATAAGATGGCGCAGTTTCCTTTCA # Right flank : AAAACAACTCTCTAAAACATTCAGCTTACCTATTTAAAACTTAATACGATCAAACCCACATTCTTTATTTTTCGCAATAAATAAAAAATTCATTCACATACCAATTATATTCTAATGAATATATTGTTCGTAAAAATAATGCATTAAATGGAAAAGTGATTTTTCACTTTATTATCGCGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACTTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACCATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGCGGGCGCGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTGACACAAATGGCAATGCGGGAGT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 820666-820216 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZRZ010000001.1 Enterobacter roggenkampii strain ECC127 NODE_1_length_1317760_cov_104.920637, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 820665 28 100.0 32 ............................ GTTAACAGCGCGTCGTCTTCCGTAAAATCCAG 820605 28 100.0 32 ............................ CGGAACCGCTTATACCGTCTGCAATTCCATCC 820545 28 100.0 32 ............................ CGACAGCGTGGCGCGGAGACCCTGCGTCGCTT 820485 28 100.0 33 ............................ CTGACTGTTTTCCTCCAGCGCCTGAGCTTGTCC 820424 28 100.0 32 ............................ TCAGGAGTAAGCAGCAACAGCAGTCAGCAATA 820364 28 100.0 33 ............................ AAGTCCGGGCTAACGATATGGTGACACGTCAGT 820303 28 100.0 32 ............................ AAACGGGCAGGAGTTAAAAATGAAAACAACAG 820243 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACGGTTTGCATAAGCTGTTTGGTGGGGTGGGCTTTATCAGCGGCATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCGCCGCTCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTAGATGAGACATTCGCGCTCGACAAGGTCGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAACACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCTTTTTTATTGGTGAGTTTTAAGTTTTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : GCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCGAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAGCGTTTATTGTTTATGCGAGGACCAGATCGCCCTGGGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATCTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGTACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAACGGGTCACGCCGAGCGCTTTCACTTCTTCTTCCACGATAGCCATGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //