Array 1 63-912 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AVQD01000011.1 Bifidobacterium breve MCC 1128 M1128_011, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
        63	    33	 100.0	    34	.................................	CTTGGCGAGCGCGGCCTGTGTCTTGCGATGCCGT  	
       130	    33	 100.0	    35	.................................	GTCGCAGGGTGGCGTGTCCGACAAGGACACCGCTC 	
       198	    33	 100.0	    35	.................................	GATTCCCGTGTCTCGGGCCGTGCGCCCTGCGCCAT 	
       266	    33	 100.0	    35	.................................	CTCCACGGGTCTGTCCGCCATGATTATGCCTCCGC 	
       334	    33	 100.0	    35	.................................	GCGCTAATCCCCAGTGGGGTAATGGTGATTGGATA 	
       402	    33	 100.0	    36	.................................	TCCACTTGGATTGCATCAGCCGTGACACCGACCCGG	
       471	    33	 100.0	    36	.................................	CATTGTGAGTGTAATCGGCAGTGTTGGTTTTCCCAT	
       540	    33	 100.0	    35	.................................	CAAGTTCGTGAAAACATTACAAGCGGATACCGATT 	
       608	    33	 100.0	    35	.................................	CCGATTCCATCCCTGAGGGTATCGCGCGCGACGCC 	
       676	    33	 100.0	    35	.................................	AGTGGATGTAGCGGACGCCACTTCCGGCTGCGGCC 	
       744	    33	 100.0	    34	.................................	AGTGCTTTCCTGTCCTTGTCAGCAGGCATCGGAC  	
       811	    33	  97.0	    36	....A............................	CAAGCCCCCATACCCCGCGCAGCCCTCAAATCCAGC	
       880	    33	  84.8	     0	.............T...........G..CCT..	|                                   	
==========	======	======	======	=================================	====================================	==================
        13	    33	  98.6	    35	GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT	                                    	       

# Left flank :   TCTATTGAACAGACACAGATTGAAATAACCTCCTGTCCGACTATGGCGACGCGGTGGTGCGCG
# Right flank :  TGCCGGATTAATACGTTGGTTGATGTCGGTATCGTCCCATCTATCCTTGATATAAGGATTTGTGATGGGGGTAACGATATCAGCTTGGTTCCACTGGTCAACGTATGAGTATCGGATACGGTTCGGTGCGTATGTTTCGATCATTCGCTGATAGTAATCGCGTTCATTAAGAAGCAGGTCCACCAGATATCCGGGTTCGTTTGGGAAATTCTTTAGTGCGCGAGTATAAAGATTGTGGTGTTCGTCCAATACCAGAGCTGGAACGGAATCTAAGCGCAAGAGTTCTTTAAACATGACGAGCCGCCCAATTCGACCGTTACCGTCGGAGAATGGGTGCGTGGATTCGAACATCCAATGTGCTTTTGCGATTGCAAAAGGATCATCTTCCAATTGTGAGTACAAGCTGAATACCTGTTTCATGGCAAGAGGCACATCCGCGGGGAGTACCGTATGAATTCCCTCAAGTTGGCTGATGACGTTGGGCACTATTTTGTATCCGC

# Questionable array : NO	 Score: 9.19
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-8.50,-8.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.41,0.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//