Array 1 45721-46622 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAHLQ010000006.1 Streptococcus pyogenes strain 14GA0832, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
     45721	    32	 100.0	    34	................................	TTTTTGGCTTCGTTGTGTAACAAATCCAGTGCGC   	
     45787	    32	 100.0	    36	................................	ATCGAATTAACAATTATTGCTTGATAGTAAAGTATG 	
     45855	    32	 100.0	    36	................................	ATAACCAAGTTTTGTATAAATATCACAATCAGTCTT 	
     45923	    32	 100.0	    35	................................	AGATTCGGCTAGATATTCCAAAAAATCGATAAAGC  	
     45990	    32	 100.0	    34	................................	TATATAGTCAGCCACATACTGCGGTACTTCTGGT   	
     46056	    32	 100.0	    34	................................	TAAATCACTAGTAATTGTATATTGTAATTTCACG   	
     46122	    32	 100.0	    36	................................	TGCGTTTGTTGTTGGATCCTGCGAAAAAGATATCCC 	
     46190	    32	 100.0	    37	................................	ACCAACTTGCTTTCCAATTTATCAATTTGGAGATAAG	
     46259	    32	  96.9	    35	..............A.................	ATGTTATTTCTCCTCGATCTCGTCCAAAAGTCTTA  	
     46326	    32	 100.0	    34	................................	GGAAGGAAATAGTTGTAAAAATGCCAAAAAAACT   	
     46392	    32	 100.0	    34	................................	TTTGGTTTAAGCTTAAGATTCACTACTCAATAGA   	
     46458	    32	 100.0	    35	................................	GAATAACTCTCCATCTTCATCAAGTGACGGTTCGT  	
     46525	    32	 100.0	    34	................................	ATTAGCACTGGTTATATTAAGTGCCGAGGAAAAA   	
     46591	    32	  96.9	     0	...............................G	|                                    	
==========	======	======	======	================================	=====================================	==================
        14	    32	  99.6	    35	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	                                     	       

# Left flank :   AAGGCGATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA
# Right flank :  GATGAACCCGATCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTTTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGATAAAAAACTCTATTGGTATGGCATTGTCAAAACCTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTAC

# Questionable array : NO	 Score: 9.24
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCCTTCATGGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.50,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : NA
//