Array 1 34594-32410 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAXQ01000016.1 Legionella pneumophila strain ATCC 35289 Scaffold13_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 34593 37 100.0 34 ..................................... TAGATATAAAAAGATTAAATCTTCTAGCGCACAT 34522 37 100.0 34 ..................................... TCACTACTCCTGAAGGTTATAATTTTTGCTATAA 34451 37 100.0 36 ..................................... TTCGAATACAATCCTAGTGTCTCTGTGTGAATTAAG 34378 37 100.0 34 ..................................... CAGGCACTGGTTCACTAGACACTGTAACATCTAT 34307 37 100.0 35 ..................................... CAATAACAAGCGAGCCTTTTGTACTAGAAGGTTTA 34235 37 100.0 34 ..................................... CTACCAGTTAATCGTAACTCAATCTCTTTTTCAA 34164 37 100.0 34 ..................................... ATAGAATACATAAGTGCAAATTATTAAATGTTAC 34093 37 100.0 34 ..................................... TGAATGTAGAAACCAGATGCCACGAATTATTAGA 34022 37 100.0 35 ..................................... TTTGTATAAACGTTCTGATATGACTTAGGTAATCT 33950 37 100.0 34 ..................................... CTAACCTGATTGCTCAACAAATAATGCTATTGGC 33879 37 100.0 34 ..................................... TCACTTTAGGCCAACGCCGATCCTCCGCTTCGAA 33808 37 100.0 35 ..................................... CTCACATCTTACCCTCAGGGCGGATATTGTGAATC 33736 37 100.0 33 ..................................... ATTAATAATATTTTAGAAGATTGGCACATAATA 33666 37 100.0 34 ..................................... TGACGCAAAGGATTTATTAAAAACGCCTTGTAAT 33595 37 100.0 31 ..................................... ATTTTACCTTTTAACACATATTGATAGGCGT 33527 37 100.0 36 ..................................... TCCATAACTGAAACGTCCTTATGCCTCAACATAATG 33454 37 100.0 34 ..................................... GAATTTGTCGGCCGCATAGACCGCTTTTATCAAA 33383 37 100.0 36 ..................................... CTATTGCAAGCTAGTTTGATCGTGTTATTATAAGAA 33310 37 100.0 36 ..................................... TGACAAACGTTTGTTTTTTAGACACAACACTAAAAG 33237 37 100.0 35 ..................................... CCTGAAAACCCGCCACAACCCGCGCCAGACTTGAA 33165 37 100.0 34 ..................................... ACCAAGTCGAAACAACATACCGAGACCGTGTTGA 33094 37 100.0 35 ..................................... TACATTGTTACGTTCATTTCACTCAGTTTTTCATA 33022 37 100.0 34 ..................................... AGCAATAACCCAAAGTTTCGCGCGCGTGCGCGGG 32951 37 100.0 34 ..................................... TTCTTTTTTCAGATTTCATTTCCTTTTCCTTGTG 32880 37 100.0 35 ..................................... AAATAATTCTTGTGACTCACGTGCCGCCATTTGAA 32808 37 100.0 36 ..................................... TAGGAATTGATTGGGGTAACGCCATCGCCATAGAAG 32735 37 100.0 33 ..................................... TTACTTCATGACCCGGACATTTTACTAAAAAAT 32665 37 97.3 34 T.................................... TCCTATACCTTGTCACAATTTCCTCATATGGCTC 32594 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 32521 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 32446 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 31 37 99.5 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //