Array 1 147082-147504 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031097.1 Clostridium botulinum strain CFSAN034200 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 147082 30 100.0 36 .............................. GTTAATGTATTTTGCATTATATTTGCATTATTAATA 147148 30 100.0 35 .............................. CCTTCTTTCTAAGCACATTTTATAAGTGCTTTATT 147213 30 100.0 34 .............................. GTGTTAGGATCATATGCACCTATAATTTCTTCTT 147277 30 100.0 36 .............................. AAGTAAAAAGATTAATAAAAAAAAGAGAAGAATAGT 147343 30 100.0 36 .............................. TCTTTAATCTTATTAAATATTTTTTCTGTTTCTTCC 147409 30 100.0 36 .............................. GATGAAGAAATAAAACAAAACATTTCCAGTAAGATA 147475 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 100.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AATCATCGGGAAAGCTTTCTGGAAAATCTTGATATTCCAATGGGGATGTGCTATTTTTAATTTTAAGGAATATTGATTTTACAGTGGTTGAACCTTAACATAGGATGTATTTAAGACTAATTTTCCTAACGTAGATATAATACCATTCACCAAGTTGAACCTTAACATAGGATGTATTTAAGATAAAAAAATGAAAAATATGAAGCATATTTAGTATTGTTGAACCTTAACATAGGATGTATTTAAGCAGGGAACTCAAATTTACAATTTGGTGTGAGTCACTTACTCCTTGGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGTCATTGATATATAAGGCTTAGGATAGGTTTTATTTTATATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGCAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : TACTATTCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAATTTCCTTTTAGGTGCAATTATTTTTGGGTTATTGACTTGTAGTCTAAAGCTACACCATAAAAAGGTTCATTAAACACATGTGGAAGAACAAGTAATAGATACAGCACTTGCTATTGATGCGGTGAATTGTATTACAAATAACTAAGGTTTTATTTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTCCTAAGTTGTATCATAACCTAAGTAATTTATAAGAATATATGTTTATATTTATTTTAAGACTATTGTATTAATATGATCTATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGAAGTCTTAGATTTTTTATTGCATGAGATTGTACGGAAAATATTAAATTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACTTACAATGATAAAGTAGGTCCTGATTTTTATTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 165513-165999 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031097.1 Clostridium botulinum strain CFSAN034200 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 165513 30 90.0 36 ........T......GA............. CAATATTCACATTCTCTAATTGTTTTATATTTCCAT 165579 30 100.0 34 .............................. ATTGGCACGTAAGACGAATTCTGTGAAAAATGGG 165643 30 100.0 37 .............................. TACCATTACTTATATTTAAAGCTTTAGCTGCCTTTTT 165710 30 83.3 34 ......GCT......GA............. ACGATATCGGCACTGTATTTGATGGCGTAATATC 165774 30 90.0 35 A.......T.......A............. GTATTAGAGCATAGAGCAAATAACCCTTCATGGGC 165839 30 93.3 35 ........T.......A............. CTTGCATTATTATATTTATATCTGTAATAGTCCAA 165904 30 93.3 36 ...............GA............. ATTAAATACTCGCTTTTTACCATATCTGTCATGCTA 165970 30 86.7 0 ......T.T...................GC | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 92.1 35 GTTGAACAATAACATAGGATGTATTTAAAT # Left flank : TGAAGGTTTTGTTTTAAATACAAATGGAGAAGAATCAATTATTAATGCTGATAGTGCTGTTGTAGCTATTGGATATTTATCTGAAAAAGACCTGTATAACCAGGTTAGATTTGATATTCCAAATGCAAGACTTATTGGAGATGCTAATAAAGTTCAAAATATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAATATTTAAATAAACTTTTGCAAAAAACTAGAATGGGTTAATATCCATATCTAGTTTTTGATCTTTACTGAAATTCTATAAGTATATGGGTGTTTGTTATGTACTAATTGAGTATATTTAAAGTTTTCCAAGTGAATTAAAAATAAAAGCCTATTCTAAGCATTGATATATAAGGATTAGAATAGGTTTTTATTATGTATTTTTTTAAAAAGCAAAATCACTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAATGGGTATATGATATTCTTGTAAATAAGGAATGGCTATTTTACTATG # Right flank : CAGGGAACCCAAATCTCTGATTTGGCGTGAGTCGCTTACTCTTTCATTATTAAGCATAGTATATATAATTAAGTTTTTTCCAAGTGAATTAAAGATAAAAACCTACTCTAGTTATTGAAACATAAGGCTTAGGATAGGTTTTTATTATGAGTTTTCAAAAAAGCAAAATTACCTGGAAAAACTTCTACAAAACCTTGTAAAATCAATGGGGATATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGGTTGAACATTAACATGAGATGTATTTAAACGCTATTGTTATATCTCCATTAAACAATCGTAAAATAGGTTGAACATTAACATGAGATGTACTTAAGCAAGAAATGCAATCATCTGATTTAGAATAATCATTTATACATGGCAATAATTTTTTGCTTTATTACTTCTTGAGTTAAATTGTGGGATTTTATTGACTAAAATATTTTTCAAAATTAGTTTTAGTTTCAGATTATAATTTAGAGTATTATTG # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //