Array 1 54387-54818 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZH01000013.1 Streptococcus halichoeri strain P791 NODE_13_length_55079_cov_132.551954, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 54387 36 100.0 30 .................................... TCAATCCCGAATGATTGGGAATTGAAACTT 54453 36 100.0 30 .................................... AATAGCGTTAGGCGATACGATTCAAGCAAC 54519 36 100.0 30 .................................... CATCGCTCTTGATGGCAATACCACTGTAAA 54585 36 100.0 30 .................................... TTCAACTATTTCAGTATCGTCATAGATGCT 54651 36 100.0 30 .................................... AATCTGAATTAACTGCAAGCCAGCGAAGAC 54717 36 100.0 30 .................................... ATTTCAAGATAAACACTTACAACACTAGAA 54783 36 80.6 0 .T............C..............TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 97.2 30 GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : AAACTAGCAACAGACCAAACGTTAATCTCCCGAAAAGTCCGTTGAAGCATCCCAGTAAGCAGTAAAAACTGAGAATATAAGAGCATATAAATTGCTTTGGGGATTGATACAGTGTCTTAGACCATAGTCCAAAGCAAGTATTTGTCATCCCCCGAATAGACAGAAAAAAAGAGTCACGCTATCCAATTGTTCATAACTCTCCTGATAAATCGATTGCTGCCATCAATCAAGCCAAGCATTTGGAATGCAAAACACCAGCCAAATGCTAGCATAGCAGCTGAGGAATCAGAGATTAGAGGCTTAATAAAAATTTTTGAACCTAAACTGAAAAGGTACTGACGATTAATCAGCCGACAACCATGATAGTTAGCCTTCTTAACGCATTGATTTCGCAAGAATTTTGCCGTATAATAGTGCTATGAAAGGACGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAAAACCTCTTGACAAAGTGCCAGAAAGTGAGTATACTAAGAAAGTTGTCAGCTGATTAGCGCAAGTGTCAATAAAAAGTAAAAAAAGTTATTGACAAAGCCTTAAGAAGCTGATAGAATAAAGAAGTTGCCTCGTAAGAGGGGAAAGACCTTTGAGAACTGAATAAGACGAACCAAAAAGTGAAGAGGGGTTTATAAGCAGTATAGA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 35407-35706 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZH01000017.1 Streptococcus halichoeri strain P791 NODE_17_length_35969_cov_123.964399, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 35407 36 100.0 30 .................................... AAAAGAGCCGTAACCTATACCGATAGTTTT 35473 36 100.0 30 .................................... AACGAAGAAGAGATTAAAGATGAATCTAAT 35539 36 100.0 30 .................................... CATGTCATCATTTGTTGGCATTTATGTTGA 35605 36 97.2 30 ..............C..................... AGGATTAGCGTCGTCGGAGTATTCTCGTTT 35671 36 80.6 0 .T............C..............TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 95.6 30 GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CTAGCAGCAACTATAACAGAATTAATCGCCTTTGAATGTCTAGAGAACGAATTGGACTTGGAATATGATGAAATTACTATCTTGGAACTTATAAAGGCTTTAGGGGTTAAGGTGGAAACACAGAGTGATACTATTTTTGACAAGTGTTTGGAGATTTTACAAGTTTTCAAATACCTGTCTAAAAAGAAACTCTTAATTTTTGTGAATTGCGGCTCCTATCTTACCAAAGAAGAACTCTTGAAGCTGAGAGAGTATATTGAATTATCTCAGCAAACGGTCCTCTTATTAGAGCCAAGAAGTTTGTACGATATTCCGCAATATGTTCTAGATGAAGACTATTTTTTGATAGCAGAAAACATGCCATAGTCTAGCTTCTAAAAACCTTGATTTCATAAGGCTTTTGCCGTATAATAGTGCTATGAAAGGGCGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCTTTTGATTGCTAAAACCGTAAATTCCCAAAGTAAGTTCCAGTCTCATCGAACTGGCACTTAGTTTGGGAAAAACGCTTAAAATCAACAGAATTTAGTCCCGGACTAAGTTCTGTTTTTTGGCTCATTGTCAACTGTAGTGGGTGACTTATAACTTATAACTAAGCGCGAGAGGAGACAAAGTTTGTCTTCTCTTTTACTATGTTCAAAGCAATGAGAATTCTTGTTTTAAAGTTTTCAAA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //