Array 1 246191-246356 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHXZ010000005.1 Bacillus safensis strain 179-I 2B3 HS NODE_5_length_274704_cov_348.008757, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 246191 32 90.6 36 .............T.....C...T........ ATCGCTTGCATCGAGATTTACGTCCTGTCTCATGAA 246259 32 100.0 34 ................................ GATAATAGCCGGCAAGCTGCTTCGTTTGGTACTC 246325 32 87.5 0 .............T.....T.A...C...... | ========== ====== ====== ====== ================================ ==================================== ================== 3 32 92.7 36 GTCGCACTCTACAAGAGTGGGTGGATTGAAAT # Left flank : ATGAAGGAAATAGCCGATCAGTTAGGCGAAACAAGACAAAACATCTCAAACATTCACAAAAAAGCACTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGCACGAAGACAAAATGACCAATGGAGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTCATCGAAAAAGTAGACTGGCTGATTTACCAAGAAGGACCTGGCTTTTGGGAGTTTATTGTGGAATATATGACGAAGATGTAAGAAAGGCTTATGATGCGAATGTGAGGTGAACATAAAATCCCCGGGACATTCGCACCTTTTTATTCGACAAAATTGAGGAAAAATGTATATTTTATAAAGGGGGAAACAAAATTCTTTATTGAAAGTTGTGGATTTTGCCTATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAATCGCA # Right flank : TTCTCGTCAGTAGGTGGCTTGAAAAATATATTGACAATTGTGCTTGATTTAGGTGTGAAAAACATGACTCTGGCTCAGTAGACATGTTTTTAAATGAATTCAAACCTGTTGATTAAATAATGAATAAGTACCTTTAGAGCAATAGTTTTTAATTAAATAGGATTAATAAAAAATTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGGCATTCGCATCTTTTCATTCGACAAAAATGAGAAAGAATGTATATTATTTAGAGGTGAAAACAAAATTCCATATAGAAAATTGAGGGTTTTGGCTATGATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATTAGCCTGCTTCGGCTTTTAAACATGATTGCCGTGTCGCACTTTACATGAGTGCTTAGCTATTCTTGATTTTAATAAGAGAAAACAAAATTATATATTGAAATTTGTGAATTTTAACAATTATT # Questionable array : NO Score: 6.81 # Score Detail : 1:0, 2:3, 3:3, 4:0.64, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACAAGAGTGGGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 254997-255429 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHXZ010000005.1 Bacillus safensis strain 179-I 2B3 HS NODE_5_length_274704_cov_348.008757, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 254997 32 100.0 34 ................................ TTAATCACTGAGTAGAGTTCGCTCTTTAGACAAG 255063 32 100.0 37 ................................ CTTAAATTGCTTGTAATGATCGTAGGCTTCTTATATT 255132 32 100.0 35 ................................ GCTTCCTGCTGCTTACCATCAGCATGAGCAGGACA 255199 32 100.0 36 ................................ AATTGATACAAGGTAACCCAAACAAGAAAAATACTG 255267 32 96.9 33 ...................T............ AATGCGGCTCGCTTTCAAAAGGAGCTAGTTTTC 255332 32 93.8 33 ........................GG...... CTGAAGCGTCGCTGACTTTTTTGGTCAAAATAG 255397 32 90.6 0 ............G......G.......A.... | T [255426] ========== ====== ====== ====== ================================ ===================================== ================== 7 32 97.3 35 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : GCCAGAGACGGTAGGAGAAGCATTCAAAGTGGATGTGATGACACCACATCATTCAGACTACAACAGCGTCAAGCTAGATAAGATGAACAAAGGGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCGATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTGAAAACAAAAAGGAATCTACCAGAAGAAGCGGAATGGCTCGAACTCGCCAAAACCATCTTACTAGGCGCTTTAGAACACGAAGGAATCGGCGCTAAAACAAATGCAGGTTATGGAAGACTTAAAATTGACGACGTCATTTCATGAAACTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGGGTGAAAACAAAATTCTATATAGAAACTTGAGGATTTTGACGAGCATTTCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : TTGCGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGCATCTAATTGAATTCAATTGTTGCTGAAAATATAAATAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTCATTCGACGAAAATGAGAAAAAATGTATATTTTTTAGGGGTGAAAACTTAATTCCTATATAGAAACTTAAGGGTTTTGCCGATCATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTACATGAGTGCGTGGGTTTAAATTAGCCGATGGTTCAGCTTGATGTTTTTTTAAAATCGCACTCTATATGAGTGTGAGGAATAAAATTCTTGTCAGAATGTAGCTTGAAAGATATATGGACAATTGCACTTGATATAGGTGTGAAAAACATAACTCTGTCTCACCCATTTTATTAATGAATTCAAAGCTGTTGATGA # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 256584-256811 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHXZ010000005.1 Bacillus safensis strain 179-I 2B3 HS NODE_5_length_274704_cov_348.008757, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 256584 32 96.9 33 ..................A............. ACACCCCCATCAAATTCAAACAGCAGCGCAAAT 256649 32 100.0 34 ................................ TTTTTCGCACTTTGACCCTCACTGGTCAGTTTAA 256715 32 96.9 34 ...................T............ ACCATTGTTCATCTACTACTTAAAATTGTTTTTA 256781 31 75.0 0 .........A....A.....A.A.-..C.C.G | ========== ====== ====== ====== ================================ ================================== ================== 4 32 92.2 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TGGTTTTGGCTATCATTCCCTAAAAAATGTTATAATTAGGGCAGAAATTGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATAGGCGGACATCAGCAGTAATAGGAAAATGAACAAGTCGCACTCAACATGAGTGCGTGGATTGAAATATCGTTGATTTAACCGGCGTGTCACCGTATTGGTCGTCGCACTCAACATGAGTGGGTGGATTAATAATTGCGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGCTGAAATATAAAGAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGAAACATTCGCACCGTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTCAGGGGTGAAAACAAAATTCTATATAGAAACTTAAGGATCATTTCCTAAAAAATATTATAATTAAGGCGGAAATCGCA # Right flank : GTTTCTGCGAATTACATAAATTCAAATATCTATTCACCTAAATTCAAGCCCTACACAACAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGCAGTTTTTCTTCACTGAAAATCCAGCCGGTATAGGAATTTTTGATTTGGTGGTCCATGTCGATATGGCAGATCGCGACAAAAGGATAGTGACCTTTGCTGCGGTAGCGCAAATCAATGAACCGCACTTCATAATGATCCTTGTATTTATCCACTTCCCACCGGTAGACAGGGGAGAAGGAGAGAAAGGCTGAAATGTTTTCATCTTGCTTAGCAATTTTCATAATTTCAGTATCAGGGACCGGCACACGGTTAAATGTGTCTAAAATGACGACCTCACCATTCATGCTGCGCCCAACATGGAAAGAGGATTTACATTTTACGGCAATGCGCCATTGTCTGAACTTCATTGTAGGCGAAATAATAATCTCTTCAATTTCATCGAATCGTGCACGCAGC # Questionable array : NO Score: 8.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //