Array 1 62881-60566 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKOT01000029.1 Raoultella ornithinolytica strain GEO_48_Down_B NODE_29_length_75262_cov_18.0825, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 62880 28 100.0 32 ............................ TGGGAGCCTCTCGGATGGAAGGCTGCATGGTT 62820 28 100.0 32 ............................ TGATATCGTCATGAGCGTGTTTCATGCTCTTT 62760 28 100.0 33 ............................ ATTTGCGTGGCGATGAAGTTAGGGTTTGCTCCA 62699 28 100.0 32 ............................ AGTCCCCGGTGATGTGGAATGTCACGGGAAAC 62639 28 100.0 32 ............................ TATTGTTCATCTGCTGCCTTTGCTTTGTACCG 62579 28 100.0 32 ............................ CGCGTGGTTGAGCTGGCCACGCAAGCACTGTC 62519 28 100.0 32 ............................ TTCCAGTCGCTGTATGTGCTGATGTAGGCGCT 62459 28 100.0 32 ............................ ATATCAAGTCCGCTGCCGCTGGAGGTACCACC 62399 28 100.0 32 ............................ GCAAGGGCGTCAACGAGCACGGCCCGGTGCAG 62339 28 100.0 32 ............................ ATGTTCAGAGGGGGCTAACGATGGCTGATGGC 62279 28 100.0 32 ............................ TGCAGAACAGTAGCAGGTGCGCCACCGATAAT 62219 28 100.0 32 ............................ AGTAGCCGACCACGTAGCGCCTGCCAGTACAT 62159 28 100.0 32 ............................ TGATGAAGGCACTCCCCAGTGTGTCTTTTTTG 62099 28 100.0 32 ............................ AACAAACGTAGGCCATCGCCCCCGATCACGAA 62039 28 96.4 32 ....................T....... ATACAGACCACCGGCAACAGGCTTGAGATAGT 61979 28 100.0 32 ............................ TTCGGGTGACCCAAGGGCATCGGGTTACGCTC 61919 28 100.0 32 ............................ GAACTGAGCCAGATTTCACACAGCGCGATCAG 61859 28 100.0 32 ............................ TGCAGAGAGTAGCGGTCGGCGTCTGGCCGCTG 61799 28 100.0 33 ............................ GTGCAGGATACCGAAAATTATGATGCCCCTTAT 61738 28 100.0 33 ............................ ACTCAGGCCCCTGGCGATCTGCCTGATACCATT 61677 28 100.0 33 ............................ TGGCGCATCGCGGTAAGCGTTGACCACCAGACC 61616 28 100.0 32 ............................ TGATCGGAAAGGCTCAGCCCTGGCGCGGTGCC 61556 28 100.0 32 ............................ GTGTAGGCTTCCCGTAGCGCGCGATCCTGTTT 61496 28 100.0 32 ............................ ATTGCCAGCGCACGCTCGTCACCCGTGGCGAC 61436 28 100.0 32 ............................ TACTATCGCGCCCCGGCGATAAACGGCCTTAC 61376 28 100.0 33 ............................ GCTAACCGGGAAGCCATCGGCACGCGCTACGGC 61315 28 100.0 32 ............................ TGGGACAGCTCGGCCTTGCGCTGCATCCACTC 61255 28 100.0 32 ............................ TCGAATCAGGCAAAGCCTCGATAAAGCCAAAA 61195 28 100.0 32 ............................ AGCTGTCGGTCAGAGGGGAGACCAGATGCAGG 61135 28 100.0 32 ............................ GCCAGACCATGCGGATAGAATATGCTGGCCGG 61075 28 100.0 32 ............................ GTTAGGAAACGATATCACCAATATCGCGATCC 61015 28 100.0 32 ............................ AGCTCGCGCTCGGCGTTGATGGTCATCTCGTA 60955 28 100.0 32 ............................ GCACGCCAGGAACAGGGAAGCCTGGCCACAGC 60895 28 100.0 33 ............................ CCTTCAGGTACAACAACTGGCGAACAGAACGCT 60834 28 100.0 32 ............................ CTGACCATAATAATAGTTTTCCCTCATGGTCC 60774 28 100.0 32 ............................ AGGAAAGCGCGTTGACGTGCTGGTGGATAGAC 60714 28 96.4 32 ..................G......... GATTGCCCGGATAAGGGCAAGGCGGGAACAAC 60654 28 96.4 32 ...........................G CGTTGAGTTCCGGGAGCCGCGGTTTTGACGTT 60594 28 82.1 0 ......................GT.TTG | T [60568] ========== ====== ====== ====== ============================ ================================= ================== 39 28 99.3 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACGTTCGCTTTCGCCTGGCGTCAACGTGCCGCCCGCGCTCTTGCGCCGGGCAACGTTGCGCTCATTAATCCCGGTGATGCGCAGAATGTCGGTTTTCGACATTTCCGTCCACTCATGAATATTATCCAGAATGCTGACCGGTAATCCCATACTCAGCAGCTCAATCAACTGCATACCGCGATTTGCCGGTAGCCCGGCATAGCGCCACAGCGCATTATCGGCAGGTTGCTCTGCAGGAACCCAGGTTTTCATCTTCCCTCCTGAATAAGGACATTTGTCATGCTTTATTATAGTCATTTGTCGGGTTGTTGAAAATATAATCGCCGGGCAGGTCATGAGTTGATTGCGGTTTTGTGGCTGGCGGCCCAACTCCTTTTATTTGTTTGTTTTTTAATTCATTGATTTTTATTAAGTATTTTTTGGCGTTAAAAAAAGGGTGAAAGGAATAAATTTGAGGGATTTTATATATAAAACAAAGAAGTGAGTTGATATTATCTCA # Right flank : CATTAACTAGCGTATTCTAAAATAAACCGTTCATTCACATATGGAATGCAAACTGAGAAATCGGATACGGACGAACACAGCCCTTCGCACGGACCGTCAGCGGGACGGTCCGCTATTTTCGTATTATTAGCCTTTTACTGCTGCAACACTTCAGCAAATTTCGCCAGCCATTGCGGATGGGCGGGCCAGGCAGGGGCGGTGACCAGGTTGCCGTCAACATGCGCCTGATCGATACCGATCTCAGCATAATGCCCGCCGCTGAGCCGTACTTCTGGCGCGCAGGCCGGGTAGGCGCTACAGGTGCGGCCTTTCAGTATTCCGGCGGCGGCCAGAAGCTGCGGGCCGTGGCAAACGGCGGCAATGGGTTTACGCGCCGCGTCAAACGCCTGAACCAGTTTGAGCACCTCGTCATTCAAGCGCAGATACTCCGGCGCTCGTCCACCGGGGATCAGCAGGGCGTCATAATCCTGTTCTTTTACGGCAGCAAAGTCGGCGTTGAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //