Array 1 1070-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMXH01000014.1 Aidingimonas halophila strain KCTC 12885 sequence14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1069 29 100.0 32 ............................. AAACCGTCATGACCGCACAGCCTGACACCGAT 1008 29 100.0 32 ............................. TTCCCCGGCATTACGGCGTCGACATGGCCAGC 947 29 100.0 32 ............................. GATCGACCGGTGCTGCTGGAGAAGGGACAGCA 886 29 100.0 32 ............................. TAGACGCCATCCTTTCCAATCTCGATCAACGT 825 29 100.0 32 ............................. CCAGCCTGAGATCCTTTCGGGAAGATGCCGTG 764 29 100.0 32 ............................. CGAGATCCAGACCTATGAGCAAGAACAGGCTG 703 29 100.0 32 ............................. GCTCAGGCGGTTGCCAAGATGATCGATCCGCC 642 29 100.0 32 ............................. AACTCCTTACCATAGCGATCAACCAGCGCAGT 581 29 100.0 32 ............................. CCTACAGCGTCCCGAAGCACTGGATTATTACG 520 29 100.0 32 ............................. CTGAATGTGGACGATACGCCCTGATTTGGCAT 459 29 100.0 32 ............................. CGCCCGCTGCGTGCCGTGGGCAATGTCCTCGG 398 29 100.0 32 ............................. ATTCATGATTTCATGAAATACACCAAGCCCCA 337 29 100.0 32 ............................. GCTTGTCACGGAACGTGGTCTGCCACACGCCA 276 29 100.0 32 ............................. TGATTGGCGAACTCAGCATTATGGATTCGACG 215 29 100.0 32 ............................. GCCTCATCGAGCCCACCGAGCACCTCGAGCTG 154 29 100.0 32 ............................. CTCGCTGTATAGCTGGTGCAGGGCGTTGTACA 93 29 100.0 32 ............................. CATGATATCATCAACAGAACAGCGCACCTTGG 32 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 18 29 100.0 32 CCGATCCCCGCAGGCGCGGGGCTCAACCG # Left flank : CGATATTGAGCCTCCGCCGCCTGCTCCGGAAGCGGTTCCCCCGGCTATACCTGAACCCGAATCGGTAGGCGACGCAGGCCACAGGAGTCAGTGATCATGGCAATGCTCGTTGTGGTAACTGAAGCAGTGCCTCCGCGCCTTCGAGGACGGCTTGCGGTATGGTTGTTGGAAATCAGAGCCGGTGTTTACGTCGGTGATGTCAGCAAACGTATCCGCGAAATGGTTTGGGAACAAGTGGAAGTTTTGGCGGAGGAGGGGAATGTCGCTATGGCTTGGGCCAGTAACCATGAATCAGGCTTCGAATTCCAGACCTATGGAGACAGTCGCCGTGTGCCGATTGACCATGATGGGTTGCGTTTGGTGAGGTTTTTACCGCAAGAAAGTATCTAGCTGTTTTTGAAGGCTCTTTAAAAAATCAAGCTGATTGAAATTTGATCAAAATCGCTGGTGGAAATTCTGCTGGCGATTTTGTTCTTTATAAACAATAATCTACAATTAGT # Right flank : GTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCAGGCGCGGGGCTCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGATCCCCGCAGGCGCGGGGCTCAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-761 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMXH01000015.1 Aidingimonas halophila strain KCTC 12885 sequence15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 29 100.0 32 ............................. TCGCGTGAGATCGAGCGAAAGGTCGTGCCCGT 62 29 100.0 32 ............................. GGTGGCGGTTGGTGCGGGATGATGGCATTAGA 123 29 96.6 32 ............................T TCGCCGGCGTCAGTGAAATCGACGCCGAGCCC 184 29 100.0 32 ............................. CCGAGAAGCGCGCCGAAAAATTCAACGAATCG 245 29 100.0 32 ............................. ACGGCGTCTCAGTCTGGAATAATGTGTTTCCG 306 29 100.0 32 ............................. TTCAATGGCCTTTTGGCGATGACTGATGAAGC 367 29 100.0 32 ............................. GCCGTCATCGGCAAGGAAAGCAGTGCGAGGGT 428 29 100.0 32 ............................. GCGCGCACCGCCACGAAGGCGCGGGCACGGGC 489 29 100.0 32 ............................. TTCTCTCTGTTCCTCAGCACCCAGGTTCCCAA 550 29 96.6 32 ................T............ CCAGTACAGCCACACAGCATCGAGCACGCCAC 611 29 100.0 32 ............................. ATTCCTTGCACAAGCGGGGTTTGAGGTCAATG 672 29 100.0 32 ............................. TACCCCAGGCACAAATTGGCGGCCGATGAAGA 733 29 82.8 0 ..............T........T..TTA | ========== ====== ====== ====== ============================= ================================ ================== 13 29 98.2 32 CCGATCCCCGCAGGCGCGGGGCTCAACCG # Left flank : | # Right flank : AAAACTGGTTTGATAGTTGTTACCACCATGGTGGTCTACAGTATTTTCATCAAGGCGAGAATAGATACTAGGGAAGAGCAAGATGATTGATCCCAACGTAGTCTTAATGTCACTCCCACTATTGGCTTGTGTGGCGCTTCATGTTGCACTCATCTACCCACATCGCAACAAGCACTAATTTTTAGGTACTCCGTCAATGTGAGAAGTCCCTTCTTTAAGCACACTTCCGAGATATCATTAAAGCTCTCGACGACATTCGTCTTCTCTTGCCGCACACGCAGTCGAGTCAATCGTTTAGCTGACACGTTTCATCCGTTGGTATCACCCGGTTGTGGCTGGCGACCCTGTCAATTATATTGCTCGCCGTGTTGATAAAACCGATGCCGTCGGCTGAACATCACCGATGTGATGGCCTGATGTGAACCAATAATAGGGGCGGAGACGATGACAACGGATGTATCCCAGGGCGGGAAGTTGACCCGTGTGCTGGCCAGAAAGGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCAGGCGCGGGGCTCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGATCCCCGCAGGCGCGGGGCTCAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //