Array 1 100274-104800 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTLA01000003.1 Pseudoalteromonas sp. Z9A4 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 100274 28 100.0 32 ............................ ACGAGGCTCAACTCCTGTTATTTTTGAGTAAA 100334 28 100.0 32 ............................ AAGTGTGCCCGGCGTACCGCCATAAACAACAA 100394 28 100.0 32 ............................ AACGAGGCTGGCTCAACAACTTCAATAGCTGA 100454 28 100.0 32 ............................ GACCCGTTAATATTTAACGCGCTGGATAAGGA 100514 28 100.0 32 ............................ GCTCTTCGCTTTGGCTTCCTGCAAATAAATAT 100574 28 100.0 32 ............................ ATACTGCAGAAGCGCATCTTGAAGCTCATCAC GC [100592] 100636 28 100.0 32 ............................ AACGACTCGTCTTACTCACCGTTTTGGCGCTT 100696 28 100.0 32 ............................ ACTTAAAAACAACTCAAGAGTTCCCGTTAAGT 100756 28 100.0 32 ............................ TAGCCAGCGTGAACAATCAAATACTCGATGTA 100816 28 100.0 32 ............................ TACAAACTACACGATTAGCGATATTGTAAATA 100876 28 100.0 32 ............................ AAACACCAAGAGCTGGCCCATTATCCTGCTTT 100936 28 100.0 32 ............................ ATCAAGGCCAAGCTGAATAAAGATCTCGCTAT 100996 28 100.0 33 ............................ AAGTAAATATCCTCAGCAGTGACATTACTAAAT 101057 28 100.0 32 ............................ CGTCATACTCGCAATAGTAGCTAGCATCAAAG 101117 28 100.0 32 ............................ AAAGAAGGCAGTTTAAAGGCGATCAATACAAA 101177 28 100.0 32 ............................ TTACAAGGTAAGCTGCATCGGCCGGATCGGCT 101237 28 100.0 32 ............................ AATAAAACCAACTGTCTGAAATCTGTACAGAA 101297 28 100.0 32 ............................ TAATGCAAAACACTGCGCTAGGGCTTAGGCAG 101357 28 100.0 32 ............................ AGAGGGCGGTGCAACATACACGCTTGATTACC 101417 28 100.0 32 ............................ TACTGATGGAAAAGCCGCTTTCGTTGATAGTA 101477 28 100.0 33 ............................ CTACAGGGGTGATGTATGAGTGGAAAGATAAAA 101538 28 100.0 32 ............................ AACCCCCTGAATGATTCTGGATTTACTTGCCC 101598 28 100.0 32 ............................ AAAACGGTGCTTTAATTTCCTTGTGAGCATTC 101658 28 100.0 32 ............................ ATCAGAACGGACTTCCACCCATCTAACTCCTG 101718 28 100.0 32 ............................ ACAGGCAAGGAAGGGACGCTGCAAATAATTGG 101778 28 100.0 32 ............................ TTTAGTGTTAACAAATGAAATATTCAAGCTAA 101838 28 100.0 32 ............................ TGTGGTAAAGCTTTTCGTATTCGTCTGACACT 101898 28 100.0 32 ............................ AGCAAAAAGCAGAGTGGGCAAATGTTGGTACA 101958 28 100.0 32 ............................ TTAACAAACCAGAAGAGGGCTATTTCATACCC 102018 28 100.0 32 ............................ GTGGAAAACTGACTGGTCAGAAATGGCTAAAA 102078 28 100.0 32 ............................ TATTGCCTTCCGAATCCACCCCAGAGTGCTGG 102138 28 100.0 32 ............................ TCGATAACATTTTCGTTATACGGACCACTCTG 102198 28 100.0 32 ............................ GATTAACATTGAAAACTCTTGTGGTGATTTAC 102258 28 100.0 32 ............................ TTTATGCGAACCTTTTTACCTAACTCATCAAA 102318 28 100.0 32 ............................ GTCTGAATTCCGATACCAACCAAGGCCGCAGC 102378 28 100.0 32 ............................ TGTATTGCAAAATGAGATTCACTGCCAAAATT 102438 28 100.0 32 ............................ CATATACTATAACAATATCGTATACGTAATTA 102498 28 100.0 32 ............................ ATTACACCGTAATAATCTTGCGGGCCACTTGG 102558 28 100.0 32 ............................ TAGCTAAATCTAAGGCTATGTATGAAAAGCTT 102618 28 100.0 32 ............................ ATAAGGAGTTTACAAATAAACAGATAGCAAAT 102678 28 100.0 33 ............................ TTCGACTTTTTCTCTTCATTGTTATTCATGTAT 102739 28 100.0 32 ............................ TAATTGCCACTGGTACGTATAATCAATTGGAG 102799 28 100.0 32 ............................ TCGCTAGCTAGTCTTTCAGATCGCTCTTTAGC 102859 28 100.0 32 ............................ ATGCAAGAAGAGGTCGATGTTAGGCGTGCGCT 102919 28 100.0 32 ............................ TGAGAGTAACCCATCTCGGTTTGTTTTATTTC 102979 28 100.0 32 ............................ AATCTGCAAAGGCTACTATAAAAGCTATTGAT 103039 28 100.0 32 ............................ TGTTACGCAATTAATAAAATGCTCCACAGTAA 103099 28 100.0 32 ............................ CGTCCAAAAAGTATAAGCAGGGTGCGCTTTAG 103159 28 100.0 32 ............................ ATAGCAGGATTAAACGACAACGACCTATCAGC 103219 28 100.0 32 ............................ CTTAGCGCTCGTACCGAACATGCGTGTAACCG 103279 28 100.0 33 ............................ CTGCAGCATTGCTTGCGCTGTCTATGCTTTGGT 103340 28 100.0 32 ............................ TAACGGGTCTATTAAAGACGAGACAACAACCG 103400 28 100.0 32 ............................ GAAAGCGCTGGGAAAGGTACGTACAATATATT 103460 28 100.0 32 ............................ ACATGAGCAAGACGACGAGCAAAGCTTAGCCC 103520 28 100.0 32 ............................ TTGCTGTAGATAACTCAACGATCAACTGGGCA 103580 28 100.0 32 ............................ AGTAAGGAATTTAGCACCAGTGATAAGCACAC 103640 28 100.0 32 ............................ ACACAGGATGATTGGTTATCGTTGAGTAACTA 103700 28 100.0 32 ............................ GTTCGTAATGTAAGTTTCACAAATTGCTTTAG 103760 28 100.0 32 ............................ TGATAGCGCTTTTCTACAAGGCTTATTCACTA 103820 28 100.0 32 ............................ TTTTGGCAACCGCGAGGTGTGGCTAGGTTACG 103880 28 100.0 33 ............................ AGTATGTGCAAAAGCTGGCTTTCAATGCTGGGT 103941 28 100.0 32 ............................ ATAAACAAAATAACCATAGAGACTGCATACAG 104001 28 100.0 32 ............................ AGTCGGCGGAACTGCTTTAGGGCGCGAATAAT 104061 28 100.0 32 ............................ ATGCTCGACGTGTCGTCGGGGTCCTTGTCTGT 104121 28 100.0 32 ............................ TCTACTGGTGCTTTGCTTATATTGTATAAGCC 104181 28 100.0 32 ............................ AATCCACTAGCGTAAGCGACAACAGATTGCTT 104241 28 100.0 33 ............................ TAAACCGAGGCTTTGAGCGCGCGCAGATTCGAT 104302 28 100.0 32 ............................ TTCTACCGTGACCGCTGGAACTGTGCCGAGCG 104362 28 100.0 32 ............................ AAATAAAAACAGACCATCCTCAATACCGTAAT 104422 28 100.0 32 ............................ TTACGGGAAGCGTGAGTTTAATGCAAATGATG 104482 28 100.0 33 ............................ AGCAGGAGAACCCAACTTTGGGGGGACGTACAT 104543 28 100.0 32 ............................ AACCCCAAAGCTCTCAAATATCAGCAGCACTA 104603 28 100.0 32 ............................ TAAGATAACGTCAGTGCCGTCAGTCGCTGCGA 104663 28 100.0 32 ............................ CGTGGATCTGCGAGTAATAATTTAGCAATTTC 104723 28 100.0 21 ............................ ATTGAGTTCACTTTGGGTCAA Deletion [104772] 104772 28 78.6 0 .C.......A...T.T..........GG | A [104794] ========== ====== ====== ====== ============================ ================================= ================== 76 28 99.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATAAAATCAATAAAACCCGTACCAGAAAAGGTGACGCATGTGAGTTTTGTTAGGGTGCAAGTCAAAGGTGAAGCACGTATAGAAAAAGATATGCTCAGCAAAGCGCAGCGTTGGTCTGAAAAATCTGGACAACCGCTTGATATTTGTTTAGCCGAGCTTGAAAAAAGTAAACCTAAAGCGAATAACAACGCACCTTTTATTTGGTTAGAAAGCCAAGAAACGAAACAACGTGATTTAGCTAGCAGTAGAAAATTTCCACTGTTTATCAAAAAGGTAGACGTTGCTGAGCAACAATTTGGAAAGTTTAATTGTTATGGTTTGAGTGTAAATCATAACCATAAAGAAAAACTGGCAAGTATCCCCCAGTTTTAACCTTTATTTTTGTTCTTTAAAAATAAAAAACTAAAACAACAAGTTACAACAAACGATAAAAATAAGGTAAAAATTCATATTTTACCTTAATCACCTGTTGTAACTTGTTTTTTGCGTGATATTCTATT # Right flank : GTCAATTAACTTGCTCTCTAACTTATTCAATAAACATAATTACTAATTGAAATATAATGGCAAACACACCCAGCAATAACAAATAAGTGCCAAATTGCGTGGCTAAATTGGGTGCTTTTAGCGCTGTAAAATAATGTACCTAAACTATAAAAAATGCCGCCGGCAAGTAGCCAGTAAAGTGCTTTTACATCAACACTTGAATAAAGCGGATATACAATAGCCAGTGCAAACCAACCCATGAGCAAGTAGGTGGCGAGCGATATTTTTTTATTACCGTTTTTTACAAATACTTTGTACGCAACGCCTGCTAGTGCAACAGTCCAAATAAATGTAAGTGTTGCCCATGACCAAGCACCGGTTAATGAGATTAATAAAAAGGGAGTGTAGGTGCCGGCAATTAATAAGTATATGGCGCAGTGATCGCACTTTTTATAAAAGGCTCTTAAGCGCGGTTGAATACTGGCATGGTACAAAGTGGATGACAAAAACAGCACAAATAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [8-7] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //