Array 1 78928-75836 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMFK01000102.1 Acinetobacter baumannii Naval-83 ctg7180000004886, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 78927 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 78867 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 78807 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 78747 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 78687 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 78627 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 78567 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 78507 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 78447 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 78387 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 78327 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 78267 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 78207 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 78147 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 78087 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 78027 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 77967 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 77907 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 77847 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 77787 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 77727 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 77667 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 77607 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 77547 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 77487 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 77427 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 77367 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 77307 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 77247 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 77187 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 77127 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 77067 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 77007 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 76947 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 76887 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 76826 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 76766 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 76706 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 76646 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 76586 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 76526 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 76466 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 76406 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 76345 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 76285 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 76225 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 76165 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 76105 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 76045 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 75985 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 75925 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 75865 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 52 30 95.3 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //