Array 1 649905-650981 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDNX01000003.1 Paeniclostridium sordellii strain SSCC26591, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 649905 29 100.0 36 ............................. ATGGGTCAGATAGTAGAAACTATGTTAGAGTACGGT 649970 29 100.0 37 ............................. CTATATCATATAGAGATGTTATTCTTCTGTTTATATT 650036 29 100.0 36 ............................. TTGGTCATCTATAGATGTATTATCAATTTGTGATAC 650101 29 100.0 36 ............................. TTTTCATTTCTTATGTATTCTTTAGATATATAACCA 650166 29 100.0 38 ............................. ACGCTTACGGCTTTGTAATGGATCTTTTTATCTTGATC 650233 29 100.0 36 ............................. AATATGGTTGTGAGGGACTTTGTAAATGCTCTTAAC 650298 29 100.0 36 ............................. TGTTTTAAAATTGTATCAGGAACATTAGCGTAAATT 650363 29 100.0 36 ............................. TGGCAAGATTTGTAGTTTCTGAATATAACTATCAGA 650428 29 100.0 36 ............................. ACGTAAGGAAACTTATGATTTTAAAGGTTATAGAGA 650493 29 100.0 38 ............................. AAGCATTAAGTGTGTCATCTAGTTCATAAGTTATACAA 650560 29 100.0 36 ............................. CATGTAGAACAGAAAAGTAAGGAGAATGTAAAGGCT 650625 29 100.0 37 ............................. TATAAACATATTGGAACAAAAGGATAATGGAGATCAA 650691 29 100.0 36 ............................. GAGGGAAAAAAAGGTGGGGATGTTCTAAAAAATTAA 650756 29 100.0 37 ............................. ACTTTTTCTCTTACTTCAAATAAAAATGTAGCTGTTG 650822 29 100.0 36 ............................. TTTTTAGTTTCTTTACAAACTAGATAGCCTTTATCA 650887 29 100.0 37 ............................. ATTTCAAGTGCGAGTTCCGTAAGTGCTTTAATTACTT 650953 28 93.1 0 .......................-...T. | C [650974] ========== ====== ====== ====== ============================= ====================================== ================== 17 29 99.6 37 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : TAGAGGATAATTTAATAGATGAATATAAGTATTTAGGGGAAGAACTAAGTGCTGCGTATAACAATAAAGATAAAAAGTTGATAAGTGAATTAAAAGATAAAAGAAGAAGTATAAGACAACAAATAACTAAGAAAACTGTAAGTGTATCAGCTTATAAGGTGAGACAAAATAAGTTAATTAATAATATAGATGTAAAAGGTTTAGAGGATTTAAAGATATTAGAATATGAGTATGATATGAATTATGAAATACTAAAAGGAAAAGGTGTACTTCTAGGAAAGGAATTATCCCAATTTATATAATTATTGAACTTTATATTTTGCAGTGGGCGTAGATAATGGTAAAATAACTATAAATACTTGCAATTACTGATGTTGGAAGAGTTTTCAATTGTTTTTAAAATACCTTATTTGTACTTCACTGCAAAATATTTAAATTTTAAAATTAAATTTATTATAAAGAGGAGTATTTTCAATAGGTATAAGAGGAAAGATTTTGGG # Right flank : TTTACTAAAAGGAAGGTGGAATAATGTCCATAGATTTAAAAGACTTAAAAGTACAAGGAGTAAAAATAAACTACTACTATATATGTAAACGAAAGTTATGGTTATTTTCAAAAGGTATAACTATGGAACAGAATAGTAATAGGGTAGAGTCTGGAAAAATTCTTCATGAAAATTCATATAAAAGAATGAAAACAAAAGAAGTTTTAATAGATGATATATTAAAATTAGATATTATAAAAGGAGATTATGTAAGAGAAGTTAAGATAAGTTCTAAAATGCAAGAAGCTGACGAGATGCAATTATACTATTATCTATACTATTTAAAAAAGGTTTTAGGAATAGAGAAAAAGGGACTTATAAATTATGTCAAAGAAAAGAAACAAGATGAACTAATATTAACACCACAAATAGAAGAAAAAATAGAGAATACACTTGTAGATATAAAAAACTTATGCAAAAGTATATCTCCTCCTAGGTTAGTAAAATTGCCATATTGTAAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 652955-654296 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDNX01000003.1 Paeniclostridium sordellii strain SSCC26591, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 652955 29 100.0 35 ............................. ATAAGAAAAGTTGAAAGAAAGCCTTTAATGATTGA 653019 29 100.0 36 ............................. ACTTGAAGTACAACTTGAATTAGTTTAGGTTCTTTA 653084 29 100.0 37 ............................. GTTTCCTTCCAAGGAATATTATTAAACTTACATATTC 653150 29 100.0 37 ............................. TCATTAGCCAAGCACATAAGACCAAGTGCTATTAATA 653216 29 100.0 38 ............................. TGGTTAATAGGAGCTTTTGTAGGATTAGTAGTTACAGG 653283 29 100.0 35 ............................. AGAGAACTAGGAAGGGAATTAACCAATAAAAAGTT 653347 29 100.0 37 ............................. AGACTTAAGGGTCATAAACTTACAGAACTAGAACGTC 653413 29 100.0 36 ............................. TTGTTAAATATTGATTTTTTAGAACTCATTTATTTC 653478 29 100.0 37 ............................. TAAATAAAGTTGTAACCATGTTTGATAAACCAAACTC 653544 29 100.0 36 ............................. TGTGTTGGGGTAGCTTTTTCTTTATTCTGTAACATT 653609 29 100.0 37 ............................. TGAAGTGTGTGATAGGCATGTTGACAACTAAGTTAAC 653675 29 100.0 37 ............................. CATATATAATGCTTAACAGGTTTAACATCTCTATAAA 653741 29 100.0 36 ............................. TATAAATATCTCATGAAGAATATTTGAGCTATCTTT 653806 29 100.0 37 ............................. TAGATAGCATAGACATTTATACCAGCTTCTTTAAATC 653872 29 100.0 38 ............................. GTTATTATATAGTGGTAGTTCTCATGTGTGATAGTTAA 653939 29 100.0 36 ............................. ACTATCGACCATATTGCGAAACCCTCACCATATTCG 654004 29 100.0 37 ............................. TTTTTATTGCTATGTATCTATTGATTAGGATAGAAGG 654070 29 96.6 37 ........................C.... ACGTATCTATCAAGCTTTTCTAAAGTACATATATCTG 654136 29 96.6 37 ............................T TTTGTAGTGTGACCGAAAGGTAGATTAGTTAAATTCA 654202 29 96.6 37 ............................T AGAATTAAAATATCTGAAAATGTTGAAAAAGTTACTA 654268 29 89.7 0 .................C......C...T | ========== ====== ====== ====== ============================= ====================================== ================== 21 29 99.0 37 GTTTTATATTAACTATGTGGTATGTAAAG # Left flank : AAGCATTTTATAAAAGATGAAAAATATAAAGTTTTGAAGGCTTGGTGGTAATATGTTTGTTATAATTACTTATGATATTGTAGAAGGTAAACCTTTAAATAAAACTAGAAAAATACTTAAAAAATATTTAACTTGGACACAAAACTCTGTTTTTGAAGGCGAGATAACAGAGAGTAAACTTCAAAAGTGTATGTGTGAAATTGGTAAAGTTATAAATGAATATCAAGATTCTATTTATGTTTATGAGGTTAAAAATCCTAATAATATTAATAAAAAATCTTATGGAGTACATAAAAATTTTGATGATATGTTTTTATAGTTTGCAGTGAGCTCAAAAAATGATAAAATAAATTGTAATGATTGAAAATGCTTAGTTTTAAGGATGTTATGTTTATTTTGTAAATACCTTATTGATACATCACTGCAAAAAGCTTATTTGTAAATTAAAAATTATCTTTAAATAGAGTTATTGCAATAGATGTATAATAAGAAAATTTGGG # Right flank : TATAAGAAAAGTAGAAATATATACTAGTTTCTTAAAAGTTTTATAATATATAAAAATATGTACTAGTTGTAATTATATCTTGACTTGTAATTGTGTAAATCAAGTTTTTACAAAATGTTTGATTAAGTTATGCTTAAATTATATAAGTTCTAGTATAAGTTAGATAAAACATATTAATTTTATTTTAAAATATATACGAGTAATTAAATGAAAAACATTTATGGATAATGTTAAACTCAAGAGAGAGTAGATTAAAATTTAAATCTACTCTCTTTTATTTTGGAAATTTTTAGATTGATAATATAAACAATGTGGTAAATATATAAGTATATTAGAATTTAAAAAATGAAAAAAGGGATGAAATTAAATGAAGAAGATAGGTATAATTATAACTTTAATATTATTAGTTATAAGTTTGGTAGGATGTGAAAATAGTGAATCTAAAAAGGCAGTAGAACAAGGTAAAGTAGAAATGAACAACAAAGAATATGACAAAGCTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //