Array 1 1503-81 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MODS01000065.1 Lacticaseibacillus casei strain MJA 12 Contig740, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      1502	    36	 100.0	    30	....................................	TGTTTTCTCCAGAACAACAGCTTAGACGGC	
      1436	    36	 100.0	    30	....................................	TGACATTGTGGGTATGCAACAAATCACCCC	
      1370	    36	 100.0	    30	....................................	GAAACTTGACAAAAACAATCTTATCTACTG	
      1304	    36	 100.0	    30	....................................	GAATATCATAATGCGGACGACCCATTACCA	
      1238	    36	 100.0	    30	....................................	AAAAGCCGGTGCAATATGCACCGGCTCACT	
      1172	    36	 100.0	    30	....................................	GCACTGATGAAACCGCACAACAGTTGACCG	
      1106	    36	 100.0	    30	....................................	GATCGCGGCACGATTGTAAACGAAGAAACC	
      1040	    36	 100.0	    30	....................................	CCAAATTGGTTAGCACCGCTTAAAGACGAA	
       974	    36	 100.0	    30	....................................	TATCAGAGGCTTATCCATTAAACAACTGGC	
       908	    36	 100.0	    30	....................................	AAACTGCCTTCCGTTGCGATCAACTCGCGC	
       842	    36	 100.0	    30	....................................	AAGCGTTCGCTTGCGCTGGTGTTGGTCTCG	
       776	    36	 100.0	    30	....................................	TCGTAGCGGCTAACACGCTTATGGCTGACA	
       710	    36	 100.0	    30	....................................	AAAATATTTCTAGAATTAGCAACTTTATGG	
       644	    36	 100.0	    30	....................................	GATCGTTGAAGAAAGGCTGATCAATATGTT	
       578	    36	 100.0	    30	....................................	CGCAAAAAATGTTTTGACAAGAACACATCG	
       512	    36	 100.0	    30	....................................	GGCCAATATCATCAGTCGGGAGATTGTCGC	
       446	    36	 100.0	    30	....................................	ACTCGTCAATATCCTTCTGCATGATCAAGT	
       380	    36	 100.0	    30	....................................	GCAATCGCGATACTTTCACCGATTGCAACA	
       314	    36	 100.0	    30	....................................	AACAAAATAATAGGAGGTTTTTACCATGGA	
       248	    36	 100.0	    30	....................................	ATGACTTTAACAATCAAATCCCAAGTTGTT	
       182	    36	 100.0	    30	....................................	TATTATCCTAACACATCCATCGAGAAGTTA	
       116	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        22	    36	 100.0	    30	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                              	       

# Left flank :   AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTTAGTCATTATTTAAGTGCCAGAGACTTTTCGTCGGTGACTGAACAGATCGGTGATACTGAACTTCAAGTCGTTCTCATCGAATTCTCAAAGGTGAACAGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGACAATCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACAG
# Right flank :  CTGAATATTCTAATGTTGTTGGATTGAAGTCAATATTTGAGACAGATTTTAAGAGACATTCAGAACCGCGTTTACCTTCCA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//