Array 1 136681-137117 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE383847.1 Paenibacillus pasadenensis DSM 19293 H582DRAFT_scaffold00002.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 136681 32 100.0 34 ................................ AACTGCACGCCCAGGTCGGTATCGTAAAAGTCGA 136747 32 100.0 36 ................................ GATCCGGCGACAAACACTTACAAGGAAACGCCGCTG 136815 32 90.6 36 ..........T.A...A............... TGCAGCCGCTCGGCTCTTTTTTTCAACGTGAAGTAA 136883 32 93.8 37 ..........G.A................... GGATCCTGCAGCGTCATGATCTGCGGCAGCGCGCTTT 136952 32 90.6 36 ...A......G.........A........... AGGTGACGGTAGAAGTCAATGGCATGCGCCGCTGCC 137020 32 93.8 34 ..........G...........A......... GGTAGCCCGATCACATTCAAATGGTAGTCCCGCG 137086 32 68.8 0 CG..TCT...C.A...A....AC......... | ========== ====== ====== ====== ================================ ===================================== ================== 7 32 91.1 36 GTCGCTCCCCACTGGGGAGCGTGGATTGAAAC # Left flank : AAGATCGTTCATCCTTATTTGAATGAATCCATCCCATGGGGGCTCGTGCCGCATGCTCAAGCGATGCTGCTGGCGCGGACCATTCGCGGCGATCTGGAAGAGTACCCGCCTTTTTTCTGGAAGTAGGAAGGAGAAGAGCGCTCGATGCTTGTTCTGATAACCTATGATGTGAGCACTACGACGAGCGATGGACGGAGGCGGCTGTCCAAGGTGGCGAAGACATGCCAGGATTACGGACAGCGGGTTCAGAACTCCGTATTTGAATGCGTTGTGGATGCTTCGCAATTCCGACGGCTGCGGTATGCTCTGGAGGAGCTGATTGATCCCGCTACGGACAGCTTGCGGTTTTATAACCTGGGTGATAGGTATAAGAGCAAGGTGGAGCATGTTGGAGCCAAGGCTTCCTATGACATGGATGGACCGCTGATTTTATGAGACGGAGCTGGTGCGAATGGCAAGCTCCCATGAAATCCCCGGGGGATTCGCGGAGGGGCGCCACG # Right flank : CCGCTGTCCGACCGTTGTCGCTTTTTTACAATATCCTGCACGTTCCTTTCTCTATAATCGAGACTATCAGACGTCCAGCCGAGATCGCGATGGGCCGCGCTGCGGTGCCGCAACGGGGTTCCGGCCATCCGGCGTCGATCATAACGAGAGGTGGAATTAGGATGGACCATAATGTGAGCACCAGCGGCGCTACAGGCGAGCATACGACGAACGGGAGACCGCACGGCTACTCCGCCCTGACGCCGTTCATCGTCGTCAGCGATCCGGCCGAAGCCATTCGCTTCTACGAAGCTGTCTTCGGAGCCAAGACGAAAAGCGTGACGGATGTCGGCACCGACGGCAATTCGTTCATCGTGCACGCGGACATCGACTTCGGCAACGGGTACCTGCAGCTGGGAGCGGCCAATCCGGACTATCATCTCGTTCCGCCGCCCGGCGGAGGCGACGCCTGCTACTCGCTCGGCGTCTACGTCCCCGACGTCGACCGAGCTCTCGAGCTG # Questionable array : NO Score: 8.37 # Score Detail : 1:0, 2:3, 3:3, 4:0.55, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCACTGGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.20,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 21643-21451 **** Predicted by CRISPRDetect 2.4 *** >NZ_AULW01000001.1 Paenibacillus pasadenensis DSM 19293 H582DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 21642 24 91.7 27 .....T...............G.. TCGATCCCGCACTCGCTGCACGCGCAG 21591 24 100.0 28 ........................ GGAATTCTTGTATTTTCTGCACGCGCAG 21539 24 100.0 41 ........................ TCGATCGCTCCTCCGCCTACTGAGCGCTGCTCGTGCGGGTC 21474 24 87.5 0 TG..................A... | ========== ====== ====== ====== ======================== ========================================= ================== 4 24 94.8 32 GTCCGCTAGGCGGCCTCGCCTTGC # Left flank : ACGGCACGTTTTTCGACGCCTACACCGACGGCGCCGTCAAAAACCCGTACGGCTATCTGTTCAACGGCGGCAGCATGCTGTACAAGAGCAGCGGCGACAAAAAGACGGTGTTCACCTACGACGCCAACCATCTGGCCGAGCTGCTGCCGGGCCTCGACTTCGCGGAGCGGATCGGCGAGGACATTGACGGCGCGCTCCAGGCCGGTCCGCGTCTGCTCGTGAACGGCGAGACGAAGCTCGATCCGAAGACGGAAGGCTTCCGCGATCCGAAAATCCTGACGGGCGGCGGGGCGCGCAGCGCGCTCGGCCTGACGAAGGAACACGAGCTGCTGCTGCTCACCGTCGGCGGCGCGACGATTCCGCAGCTCGCCTCGATCATGAAGGCGGCGGGCGCTTGGCAGGCGATGAACCTCGACGGCGGCGCATCGAGCGGCCTTTATTACAACGGCAGCTACCTCACCCGCCCGGGACGCCTGCTCAGCAACGCGCTGCTCGTACGA # Right flank : CCCACTGCTCCGCCTCCTGAGCGCGGCTGGACTTGCAAGCCAGGGATTTCTGCCCGGCATCACGCCGGACGGGAATCCCTTTTTTCGATCTGGATATTCTAATCGAACAACCGCCTCCGCCATCGAATGGAGCTCAGCCTGTTACGAAAGTTCTTTTGGTGGGTAACAAACATCGGAGTTGACACATCAAGGGAGGTCACTATGAGAACGATTCGCGCGCTTGGGCTGGCATGGCTGCTCCTGATCCTGACGGTGACGGGCGCGGCCGGATGGACCGGAACCGCTTCGGCGTCGGAGCCGGCCGCCGGCAAGGTGTATCAGATCGGAACGGACGTCACATTCGCGCCGTTCGAGTTCCAGGATGCGAGCGGCAAGTTCGTCGGCATCGACATGGATCTGATGGAGGCGATCGCCCGCGATCAAGGCTTCCGCTACGAGATCAAGCCGCTCGGCTTCAATGCCGCCGTGCAGGCGCTGGAGTCCGGCCAGGTGGACGGCGT # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.04, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTAGGCGGCCTCGCCTTGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.50,-2.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //