Array 1 9154-10084 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCJU010000017.1 Yersinia kristensenii strain M70 NODE_17_length_107098_cov_87.4994, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9154 28 100.0 32 ............................ CACGAAACAAACATTGTTGTGACTGCCAGCCC 9214 28 100.0 32 ............................ TGATCGGCAGTTAAATTTGCATAGAGCTGTTT 9274 28 100.0 32 ............................ TGATGATGAAAGACAGGGAGAGTAGCCATGTG 9334 28 100.0 32 ............................ AGTAACCATTGGCATTTCTGCCCCGATTCACA 9394 28 100.0 32 ............................ ATCACCAAATTATATTTTTTAAGGACTTTATA 9454 28 100.0 32 ............................ AGCCGCGCCAGTCAGGACGACAGGCTGCTCAT 9514 28 100.0 32 ............................ CTACGAACTTCAATTATCCCAGCCCTGTTCTC 9574 28 100.0 33 ............................ AGTTAGTCAAATTATAGTCCTCGGTGGTAACTA 9635 28 100.0 32 ............................ ATCTCCGATACCTGCCCAATCTGTGTGAATAT 9695 28 100.0 32 ............................ ATTGGGTGTTGGTTTACCGGCTTACGGATATA 9755 28 100.0 32 ............................ GAAGCTATGTGCAAACGTGCTGGTGGTGTGTT 9815 28 100.0 33 ............................ CGCTTTATTAAAAGCGAATCCAACGCCGATGAA 9876 28 100.0 32 ............................ GTTTCAACTGTATGATCATCAATTACAATAAA 9936 28 100.0 32 ............................ TACAAAGTGAGCCTAAAGTCGAAGATGAAGTG 9996 28 100.0 32 ............................ TGAGTAAACCCATGCGCCCCAAAGTTCAAGCC 10056 28 96.4 0 ....................T....... | T [10076] ========== ====== ====== ====== ============================ ================================= ================== 16 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATTCCAGTATGCCATTGAGTATGCCATTAATGATTAGGTAGGGTTGTTTTCATTTGTACTGGATTGAGGTGGTTTTTATATAACCTTTTGTTTTATAGTTTAAAATTGAAATGTATTGTTCCGCATTAGAAATGTTTTTAGCGGACTCCTCCTCCGCCATCATTTCTCTGTTTTCCCTGCTTGTTATCCTTGCTTAATCTCCTGAAATACCTCAATTTTTATCCGGTAATATTTATTCTTTCTGATATAACAAAACGAGCAAAACCCACCCTAAAATAGTGAATTATAACTTTTTCAAACTCTCTTTTTGTTCGTCACATTATCCGCAGTAGAAAAGGCTTAATGACATTTTGCCTTAATCCCAACTTGAACCCTTTTTTTAGCGTGTTTTTTAACGCATTGATTTTATATAGAAATCCCCAAGATTTTTAAAAAATCATTTTTTATCACTGCGCTTCAATGCACTTTTATTATCAGTAAGTTATCTGTATTGTTCTACT # Right flank : ATCTATCCGGCGTCTTATTTCTCCTTTTTCGTTGAATACCTCTAAAGAGGTATATATTTGATTTTATGTAAAAATTGTTTGATGCTGAGTTTTTTTTGAGCTGGTTCATAAAATTAAATACCCACACAAAGAATGTTTGATCTAAAACAAGCATTGTTACTACAACAAATCATTTACTGAAAATCCTCCTTACTATCTCCATAACCCCCCACTGGATGAAATCTGTCATGGGTATCTCTGGGTGAGTGTTTGACATCCTGGTGCGGGTTTAAAAATAAAAAAATGACTGCCTGGTGCAAACACCGGCGGCGTCCGGTATGGAAAAACACACTGGAGTATCTATTGTGAGCAAATTTATAAGACAAATGTCGGTAGGGATATTGGCGCTTTTGGTCATCGGAGGGGTGTTTTCTGTGTCGGCAGCACCTACGCCGCCGATTGAGGCCCGCAATGATAAGTTCGCGCAGCAGCATGTGGATCAATTCACCTCTTGGTTGAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //