Array 1 916184-919111 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT906477.1 Clostridium cochlearium strain NCTC13027 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 916184 29 96.6 36 .C........................... TACGATATTTAAGCCAGAACCACTGCATTGGGCACG 916249 29 100.0 36 ............................. TATTTAGAAGCTACTAGACAACTTAAAGCAAATACA 916314 29 100.0 36 ............................. GTTATAACTAAGAGTATGGAGGATATTGGTTTAGAG 916379 29 100.0 36 ............................. TCTATTGCAGCAGGTGGATTTTTAGCAATGGCAACT 916444 29 100.0 36 ............................. ACTGGTGATATGAATTTAAGTAATGTAGAACACATT 916509 29 100.0 38 ............................. ACATACTTGCATCTTCTTCGCTTGCTAATTTACTTATA 916576 29 100.0 37 ............................. GTATATTGGTTATTTTCAACTTCTTTTAAGAGTTCTA 916642 29 100.0 37 ............................. CTTATATGCCGAACTGATTTATTGTGTTCTATAACTC 916708 29 100.0 36 ............................. CCTGTGGTAATACTTCCACTATTTTCATCGACATAA 916773 29 100.0 38 ............................. CCAAAGATAGCAGAAATAGAAGAATTTAAAGAAATAAT 916840 29 100.0 37 ............................. CCGATAATATTGGAAATATAACAATAGGGGTTAATGA 916906 29 100.0 37 ............................. ATCGCTTTATAATTTCTTGTATCTTTTTCAAATATTA 916972 29 100.0 38 ............................. TCTTTATATATTAGTCGCGGTAGCAATTTTAAATAATT 917039 29 100.0 38 ............................. TAAGAATAGATATATAAAATATGTAAATTAATTAAACA 917106 29 100.0 35 ............................. GGAATTGACGTTGGCTACAGCCATACAAAAGTATA 917170 29 100.0 38 ............................. CCAATTAGCATGTGTGGGAACTTATTCATATCTACTAT 917237 29 100.0 35 ............................. TCTTTTATGTTATTCATTGTTTATTCCTCCAGCAC 917301 29 100.0 37 ............................. CATGTCGCTTATAGTTAGTTACTATTTTATTTACTAT 917367 29 100.0 36 ............................. ATAGTATATGGTATTGCAAGTGCTTTGGGAATTTAC 917432 29 100.0 38 ............................. CGATCACTCTACGCATGTTGTACGAGTTGGAGGCGTGC 917499 29 100.0 38 ............................. GGAGAAAATGAAGAGGATAACGAAAATTTGTATGCTAG 917566 29 100.0 39 ............................. CTAAAGAAGATATAGAAAATGTAGACAAGAAAGTAGATA 917634 29 100.0 37 ............................. TACACACACATCTAAAAACTTATACAGCAACCTCCTA 917700 29 100.0 37 ............................. CTCTCAACTCAATTAATGTCATGATAGCGTAGTTGGC 917766 29 100.0 36 ............................. ACAAAAGATACAATGGAAAGAATTGCTATTGCTCTT 917831 29 100.0 37 ............................. GAAGGAGACAACGGGGTATATGTAGTAGACGGATGGG 917897 29 100.0 38 ............................. TCTTTAGTAAGATACACGCTGCTGTAGAAACTTGTATT 917964 29 100.0 36 ............................. TAAAGATATACTACCAATTTTAAAGAAAATAAAAAC 918029 29 100.0 37 ............................. TTGTATATATTGTTATAATTTCTGTATTAAGTGTATT 918095 29 100.0 36 ............................. AAATGTTACAGAGTATAAAACTACTTATCAACTTGA 918160 29 100.0 36 ............................. TGTCTATATTGTAAAATAACTTTTCAAATTTGAAAA 918225 29 100.0 37 ............................. CACTTCATTAGAATCTTTATTAGTTGGAATATTTAAT 918291 29 100.0 37 ............................. ATGTCGTAGGTAGGAATAATCCCTCCATCGTGATAAT 918357 29 100.0 36 ............................. TGGTGTTTTTTAAAGTTTGTGTTTTACTTTTTAGGG 918422 29 100.0 38 ............................. TCGTTATCTGGAATATGCATAAAAGATAGCAGATTTAT 918489 29 96.6 35 .................C........... TTATTTATATTATATAATATGTGTCAGAATAAAAA 918553 29 100.0 37 ............................. TTGTATCTGTTGCAAATCTTCTCAAAATCATTGCTAA 918619 29 100.0 37 ............................. GATGATCCATACCTCTATGAATTTTTCTGTTACATCT 918685 29 100.0 38 ............................. TGATATATTGAAAGGTGGATTAGTGATTATTACATCAA 918752 29 100.0 38 ............................. CTTCTTATTGCTATTTTCATTTGACCATCCTTTCCTTT 918819 29 100.0 37 ............................. TTATGGAATGGTAAAGGAACAGTACAAGTAATCCCTA 918885 29 100.0 38 ............................. AATGAAAATGATTATGAGAGTTTTGGATTTGGTGATGT 918952 29 100.0 36 ............................. TATCCTTTTTTATAAAACATGAGTGAGTGGAGATAC 919017 29 100.0 37 ............................. TTTAGTGATGAACTTAGAAAAAATATTAATCAAGAAT 919083 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 45 29 99.8 37 GTTTTATATTAACTATGTGATATGTAAAT # Left flank : AAAGCGTTAAAGGCTTGGTGGTGATATAATGTTTGTAATACTTACATATGATGTGGAAGAGAAAAGGATAAATAGAGTTAGAAAATTACTTAAAAAATATTTAACATGGACTCAAAATTCTGTTTTTGAAGGTGAAATAACAGAAGGTAAACTTCATAAGTGTTTATGTGAAATAGATAAGATAGTAAATAGAAATTCGGATTCAGTATATATATACATTGTAAAGAATTCTAAAAATATAACAAAAAGTGTAATAGGAATTGAGAAAAGTTTTAATGATTTATTCTTGTAAAGTAAAGTTTTATTTGTAAATCTGCAGTAAAGGTAAAATTTAAAAAAACCACTTCTAATTATTGATTTAACTAAATTAGAGTGATGTTTTTTAAAATACCTAAAAACATTATCGAAGGTTTACTGCAAAAACTTTAAATTTATGATATACTTGATATGGAACAAACTTAGTGATTTCAATGCTTTGGCTGTATTTAAAATTTAGGGGG # Right flank : TAAGGACATGGTATAAATGTCAAGATTAAAATGTAACTTTTTGATCATTTAAGAATGTAGTTTTTTACTCATCGTCATCTTTAAAATGATCTTTTAAGCGATAAGATTTTCCATTAATAGGTACAACATGAGCATGGTGCAATATTCTATCCAAGATAGCATTTGCAATAACAGGATCATAGAAAATATCATCCCATGCATTGAAATTTATATTAGTCGTTAAAATTGTACTTTTTTTCTCATATCGCATATCAATGAGTTGGAAAAATAATTTAGAGTCTTCTTTATCTATCGGTAGATAGCCTAGTTCATCGATTATTAGGAGCTTATACTTACTAAAATGTTTAAGTCTAGAATCTAATCGATTCTCTAAATTTGCACGTTTTAATTGCTGCAATAAATCATGACATTTAATAAAGTATGTACTATATCTACGTTTTGCTGCCGCAATTCCTATAGATGTGGCAAGATGCGTTTTTCCTACTCCGCTAGGACCTAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 979067-981179 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT906477.1 Clostridium cochlearium strain NCTC13027 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 979067 30 100.0 38 .............................. AATATACCAGTATTAAATATGTGATATAATATAAGCAG 979135 30 100.0 39 .............................. ATGCTTTAAGACATCAATTAACCTTGCTAGAAGTCGATA 979204 30 100.0 36 .............................. TATTCTAGTTCATAGCTTTCTTCTAATTCCAATAGA 979270 30 100.0 39 .............................. TGGGTAGAAAGAAAATCGAGAACGCAAGATATACTTATG 979339 30 100.0 35 .............................. TTGCAAAATCTTTTAATCCTAAGTCAATTCCTACT 979404 30 100.0 38 .............................. AAAATTACAATGGGAAAACAAATGAAATAACTAATTTT 979472 30 100.0 39 .............................. TTTTTCTTTTCCCTGCTTCTATTGTATCGTCTGTAATTA 979541 30 100.0 36 .............................. GAAGTTGAAAGAGGGAATGGAGCAAATGCAAGAAGT 979607 30 100.0 36 .............................. TCGATACTGAAATAAAACAATTAAAAAAATCAAATA 979673 30 100.0 37 .............................. AGTAGATACTACGCTCCTATTCTTTACTAAATCCCTA 979740 30 100.0 37 .............................. ATGACTTAATACACATATTATTCAAGGGGATAGACCT 979807 30 100.0 39 .............................. AAATTTCAACAACGTACTTTATCAAGAATGAAATTAGGA 979876 30 100.0 36 .............................. TCCGGAATTTTAGCACAGGATAATAAAAAAGTTTTA 979942 30 100.0 38 .............................. GAACAATGTTGGAGTATAAAGCTAATTGGTATGGAAGA 980010 30 100.0 36 .............................. TAAACTAGGAATAAATATAAAAGCAAGAGATAAGAA 980076 30 100.0 39 .............................. CTTTCACTAACCTTTTGAACCTTAGCATGTTTTTTAACA 980145 30 100.0 38 .............................. TTTGTTCTTCTATTTGAGGATAAATTATATCTTCATAC 980213 30 100.0 38 .............................. AACAAAAGATGAATTAATTAAATAAAAGGAGTTTGATA 980281 30 100.0 36 .............................. TATGGACCTTAATAAATTAAATGGTTATATAGGTAA 980347 30 100.0 39 .............................. CGTTGTATGTATTTCCAGAAACCCAGATCCAAGTCCCGC 980416 30 100.0 36 .............................. CTATCTCATCTCTTATATAGTTGTTTATGTTCTCTT 980482 30 100.0 36 .............................. TAACTCAGTTAAATATGTATTTAATAGAGTTGTAGT 980548 30 100.0 38 .............................. GTAATCAAGACGTATTTAATGACAATGGCAGTGGGTAC 980616 30 100.0 35 .............................. ATTGGAGTATTAAGAAGGCAGCAACCACACCGATT 980681 30 100.0 37 .............................. TGGTTATAACAATGATAAAGAATATGAGGAAATTTCT 980748 30 100.0 36 .............................. TCGTTGTGCTGTTTCCAACTTTGGTCACGTGTCTAA 980814 30 100.0 36 .............................. TGGGAAAGGGCTTTTTAGGTTGAACCCTTTAGAACC 980880 30 100.0 39 .............................. CATTTTCCACGAATGGTAATCTTAAAACTTCTCCTAATG 980949 30 100.0 35 .............................. CCAGCTTGGTTAACATTAAACAATTAAAAATAAAG 981014 30 96.7 39 ....................A......... AAAGATTCTTCGTTACCTCCAAGTCTGTCCGGATGTAAT 981083 30 100.0 38 .............................. TCTTAAAATACATAGTAAATAATAGATAAACATACATA 981151 29 76.7 0 ...............G.A..C.-.CA...A | ========== ====== ====== ====== ============================== ======================================= ================== 32 30 99.2 37 GTTTTTAGAATAACTATGAGGGATTGAAAC # Left flank : ATGATGAGGAAATGGTTAAATGGTTTAGTGAACATAATAAATATGCTGTTGAGGAAATAGGAAGAAGATTTTTAGAGCTATATGAAAGGAAAAAATGGAATCCGGATAAAGAAATTTTAGATAAATTGAGAAAAAATTATATTAAAATAGAAGGAGATATGGAAGAGTTATCAGAGAACTCTAAGGGAGAAATTCAAGGCGGAGATATTGAGATTTTAAACTATGAAGATATTGAATCTTGGAGCGATAAGTTAAAAGATGTTGATGATATATTTTAAGATAATTTTATGTTTAATATTAAGAAAATAATTATTAACTAATAACAATTTACAAAGTCGTCGACCCCCAATCCTGTAAAAAATGCGGGAGGTCGACGACAATTTTTAATTGCCTCGTAAGTATTGATTTCATTGATGTAAAGCAATATTTATATATTTTTGTTTACACTTTGTTAACAATGGATAGTTTTAACAAAGTGTGTTATAATGCAGATGTAATTG # Right flank : ATTAAGTATCTAGAAAACATACCCTCCCATTGATAAACTTAAGTAAAAGATTATCAATGGGAGGTTTACTTATGTATAAAAAATTAGATAATGATGCTTGGGAGGAATATTTAAATAAATTTAACTCTGTTAAAGATACAATAACAGTGAAAGATTTCTGTGCTGAGAATAACCTTAATAAGAGTCAATTTTATTACCATAAAAAAAGAGTAGAAAAGGCAATTGAAAGTAAAGAACCTGTTTTTCAGCCTATTTCTTTGAATAGTAAAGTTGATAATACTAAAGAAAATAAATCTACATTAAAAGAAGTAAAAATTAATGTAGGCAATGCTAATATCCTTATTCCTGTTAGCGAAGCTACTTTAATAACAGCAATAATTAAGGAGTTAATTCTAAAATGTTAAATATAGATAAGGTAGAAAAAGTCTATCTTGCCTGCGGTTATACGGATTTAAGAAAAAGTATTGATGGTTTAGTTATGATAGTGCAAAACCAATTTA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGAATAACTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 992860-993353 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT906477.1 Clostridium cochlearium strain NCTC13027 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 992860 30 100.0 37 .............................. GAAAATTCACGAATAGTGTAAAAGATGCAGGTGGAAT 992927 30 100.0 36 .............................. CAGATTCGGCTGTTAGGTAGTCGCCTAACTGTTGAT 992993 30 100.0 38 .............................. AAAACTTGAAGAAACATTTTTCTTTTTGTCGCTGTGCT 993061 30 100.0 36 .............................. TTAAATACATAATCTATTTTTTTGAATCTGTTTCTT 993127 30 100.0 37 .............................. TTTAATGCATTAGTAGCCTCTGTAAAAGGTTTTCCCC 993194 30 100.0 36 .............................. GAAGCTCCGCCAGATTTTGTGTATGTCGTTCCTTTG 993260 30 96.7 34 A............................. AAAAAATGAAGTATAAACGACCGTAGAGTTTTCT 993324 30 96.7 0 A............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 99.2 36 GTTTTTAGAATAACTATGAGGGATTGAAAC # Left flank : GACGCATATGTTTGCTATATTAGTTTACGATTTTGGTGAAAAAAGAGTGGGCAGAGCTTTAAAAACTTGTAGAAAATATTTAACTTGGGTTCAAAATTCTGTGTTTGAAGGTGAAATAAGTGATGCTAATTTAAAAAAGTTAGAAATGGAATTAGATAGAATTATGCATAGTAATGAAGATTCGGTAATTATATATAAGTTTAGAAGTACTAGATATACTACAAGAGAGGTTATAGGTCTTTCAAAAAATGAACAAGATATATTTTTATAGAAAATTTCGGAAACCATCGTTACTTGTTTTAATAATGATTATTGGATAAGAATTATTTACAAAGTCGTCGACCCCCAATCCTGTAAAAAACCCGGGAGGTCGACGACAATTTTTAATTGGCTCATAAGTATTGATGTTATTGATGTAAAGCAATATTTGTATATTTTTGTTTACACTTTGTTAATAATGGATAGTTTTAACAAAGTGTGTTATAATGCAGATGTAATTG # Right flank : CCATAATAAAAAACACCTTACTCCATACTATAGATTAAAAAATTACATATAGAGTAAGGTGTTTTTTAATAGAAAAATAAATGAACCGTCTCCTAGATTTTACTCTTGAAATACTCCCCAGGAGTTTAAGTTATTAGTACATCCTATCCAAATAGGAGTAAGCGTCAAAGTTTTAGCACCTTTAATAATTCCAAGAATAGTATTAAAATATCCTAGTAAGGCAAGAATATGCTTTACTAGGATTAATTTATTTTTTATCTTTAATTTTCATATTTTCAGGAATCTTATCATTCCAAGGCATAAGATTCTCTAAGCTTTCGCTATCGTATATATCTATCTTTGATAGATTATCAAATAGATAGACTAAGTACCTTTCTACAACTAAATTATTAGCCTTGGCAGTTTCAACAATACTATAAATATTGCTACTTGCAGTTGCACCCTTAGCAGTGTTAGCAAATAAGAAATTTTTTCTTCCTATAACGAAAGGCTTAATTGCT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGAATAACTATGAGGGATTGAAAC # Alternate repeat : ATTTTTAGAATAACTATGAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 4 1192481-1192056 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT906477.1 Clostridium cochlearium strain NCTC13027 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1192480 30 96.7 35 G............................. GTATGATTTATTTCTAACTCTTTTCTAGTTCTTTC 1192415 30 96.7 36 A............................. GTAGTTATGTATTGACTTATTCCATCTAATAATAAC 1192349 30 100.0 35 .............................. TCTTTATGAGCTTTTAAGACTTTCTTAGTTTGATT 1192284 30 96.7 34 T............................. AAAATTTAATTTAAAAGACTTTACGCCCTCTATA 1192220 30 93.3 37 G........................A.... GATTTTATGCCTTTCACAATATTTCCTGTTGCAGTTG 1192153 30 100.0 37 .............................. ACTAGAAAAATTTAAAAAAGCTCCTTCTGTTGGGTTT A [1192146] 1192085 30 93.3 0 A..........................G.. | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 96.7 36 CGTTTTATAGTTCCTATGAGGAAGTGAAAT # Left flank : TTTTTAAATAGTATAAAAAATAATATAATAGCAAAATATAATTCATTTTATAACGAAGAATATAAAGGAATTATGAATATAAGTATATTAGATGAAAACAATATAAGAAAAAAAATAGACAAATATAAAAATTGGATATATGAAGGATATTTAGGTGCTTTTATAATAGAGGGAGATACTAAAATAGTAGAACTTGCTTATAGTTGTGGATTAGGTAGTAAAAGTTCTCAAGGGTTTGGATTCGTTGAAACATTTAAAGATCTTAATAGTATTAAGAATTATAGAAGAATAATTTAAGTTTCAATGGTTTAATATTTTGCAGTGAACTGTATTTTTTATAATATATGCTTAAAGTATTGATTTAACTGAATTTGTTGGATGTTAAACAAATTTTACAAAAACACTATTGGAGGTTTACTGCAAAATGTATCACTTACGATTATTCTTAATAGTATTGAAAACAAGATATAACCTTGATTTACAGTGGTTTTGAAAATTGG # Right flank : AGGTGTTTCTCTTTTGCTTTAGCTATAATGAATGTATTTCTAATGTTTTATGAAAGATAAACAGTTATGTAAAAATCATGGCATGATAGTATATATAGTAAATCAAAATTGTACATTAGTATTTACCAATAGATTTTGATTTGTATTTTAGACAAAATAAGAAAAGTACAGATATGATTTATGGCGTCTATACTTAAATGGATTAAAATTATCGGGGAATTTTTAATTCTTATAGATAATGAAATACCAAGGGAGGAAGCGGTTTCGAAAGTTCTAGCAAAATTTGGCGTTCCTAAAAGTGAAATCTGGGAACATGGAAATTTTTAACACTATTAATGTCTAATAAAATACATTCAGCAGGTAATATTAATGCCCCTCTATATATGCAGAGGGGCATTAATATTTAAACATGTCTATACATGTCCTATGTTTTACTCCATTTATCTTAGTTCGTCTATTAATTTGTTAATTATTTCTGGAGGATAATTTTTACATAGAAC # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTTTTATAGTTCCTATGAGGAAGTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.00,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //