Array 1 89821-90020 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806160.1 Bacteroides sp. HMSC068A09 Scaffold482, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 89821 47 100.0 30 ............................................... TATTTCCCTACCGTTTGCCTGCTTGACATC 89898 47 100.0 29 ............................................... GATGCAAAAGCGGGAAGGAACCACTTCCG 89974 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Left flank : TAAACGATTTCTTTATTTAAGTAAAATATACGACGGTTATATTGCCGCATACGCTGAACAATAGTGCCGGAAACAAAACTTCCACGGATCAAATCCTTCATGGTACATTCCGCAATCCAAGCCGCATCACGGACATCACTCTTCCTACCAGGCAACTACTTGATGAAATAAGAGTTCACTAACTTGATGTAACTCTTCCAACTCAGGCGTCAAAACACCATATTTGAATTCTAGTTTGTCGCCATTATCATTCAAGATACAGGCAAATACACTATCTTTGTGAACGTCAAGACCACATACTATTCTCATTGGAGATAACATTTTTGAGACTATGAGCTCGTCAAACATTTATTTTGAGGCTCGTCCATCGATACCTCTCACGCCATAAAGATAGGGGTGGGCTTGACTTTTTCTTATTACACTGGCATATAAATCGCAATTTATATCTAAATTTGAGCCATTGAATACAGCGCCATCTCTTTTTTTACGCAACTTGCTTT # Right flank : CGCTAACAAGTGAAGTATTAGACTTAATCATGTTGTGATTTGCTTTCAAATTAGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGTATCTTTGAGCCATTGAATACAGCCGGGTGCAGATGGCAAACCGGGAGAGGATGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCAGAAAGACCTCACGTATATAAAAGTTTTATGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCTACCGGATTGGAGTTAAACGCTAGAAGCATGTTGTGATTTGCTTTCAAATTAGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 90910-91108 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806160.1 Bacteroides sp. HMSC068A09 Scaffold482, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================= ================== 90910 47 100.0 29 ............................................... CTGATAATGATCAAGAAGACCTCTGTAGG 90986 47 100.0 29 ............................................... ATTTATAGATATTTGCATTAATGCATAGA 91062 47 59.6 0 ............................NNNNNNNNNNNNNNNNNNN | ========== ====== ====== ====== =============================================== ============================= ================== 3 47 86.5 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Left flank : AGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATCTTTGAGCCATTGAATACAGCTTAGGAAAGAATACACTAGGCGACAATAAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCTTCAGAGATATTGCGCATGAGAGGCATATTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCTTATTACGATTGTCACGAATGAATGAATTGTTGTGATTTGCTTTCAAATTAGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGTATCTTTGAGCCATTGAATACAGCCTCAGAAATGGGAAGAGTTCAAGATATACC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGTATCTTTGAGCCATTGAATACAGCGGTTTCCCAAGTAGAGTCAGCAGCAACCGCGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCGCGGCTGCACCGTTGTTAAATGATCCCTGCGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCATAAGTCCATCTCATTGTTAGATCACACATGTTGTGATTTGCTTTCAAATTAGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATCTTTGAGCCATTGAATACAGCTTGTTAATTGTTATCTTTTTGATTACACTGTTGTGATTTGCTTTCAAATTAG # Questionable array : NO Score: 5.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.33, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 3 91248-91448 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806160.1 Bacteroides sp. HMSC068A09 Scaffold482, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 91248 47 100.0 30 ............................................... GCGGCTGCACCGTTGTTAAATGATCCCTGC 91325 47 100.0 30 ............................................... ATAAGTCCATCTCATTGTTAGATCACACAT 91402 47 57.4 0 ...........................NNNNNNNNNNNNNNNNNNNN | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 85.8 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Left flank : TATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGTATCTTTGAGCCATTGAATACAGCCTCAGAAATGGGAAGAGTTCAAGATATACCGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCCTGATAATGATCAAGAAGACCTCTGTAGGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCATTTATAGATATTTGCATTAATGCATAGAGTTGTGATTTGCTTTCAAATTAGTATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGTATCTTTGAGCCATTGAATACAGCGGTTTCCCAAGTAGAGTCAGCAGCAACCGC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATCTTTGAGCCATTGAATACAGCTTGTTAATTGTTATCTTTTTGATTACACTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCTATCCATTGATTTGGAGTTACTTTCATGGTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCATCTTTCCCTGCTTAGGCGTGGTAAACAAGTTGTGATTTGCTTTCAAATTAGTATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGTATCTTTGAGCCATTGAATACAGCTCAAGAGCACGATATCCATGACCAAAACGGTTGTGATTTGCTTTCAAATTAGTA # Questionable array : NO Score: 4.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.29, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 4 91585-91784 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806160.1 Bacteroides sp. HMSC068A09 Scaffold482, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 91585 47 100.0 30 ............................................... TATCCATTGATTTGGAGTTACTTTCATGGT 91662 47 100.0 29 ............................................... ATCTTTCCCTGCTTAGGCGTGGTAAACAA 91738 47 59.6 0 ............................NNNNNNNNNNNNNNNNNNN | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 86.5 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Left flank : TATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGTATCTTTGAGCCATTGAATACAGCGGTTTCCCAAGTAGAGTCAGCAGCAACCGCGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCGCGGCTGCACCGTTGTTAAATGATCCCTGCGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCATAAGTCCATCTCATTGTTAGATCACACATGTTGTGATTTGCTTTCAAATTAGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATCTTTGAGCCATTGAATACAGCTTGTTAATTGTTATCTTTTTGATTACACT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGTATCTTTGAGCCATTGAATACAGCTCAAGAGCACGATATCCATGACCAAAACGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCTCTTTCTTCAATACTTGCTTTTCCATAACAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCAGTCGGTGTAGGAATGCTTGTACCATTCTAGTTGTGATTTGCTTTCAAATTAGTATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGTATCTTTGAGCCATTGAATACAGCCGAATCTACATATCTAACTGTAGCACAACATACTAAAGCCTAATATAGGAA # Questionable array : NO Score: 5.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.33, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 97115-96767 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806175.1 Bacteroides sp. HMSC068A09 Scaffold625, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================ ================== 97114 29 100.0 96 ............................. GTCGTTACCATCACGTTCGCCCATGTTCTCAAACTCAGTATTAATTGAGTGGAATTGAAACTTCCTTCAGCTAAGAAGAGAGACACACATATAACA 96989 29 96.6 36 ..........................G.. TCATCTCGAAGTAGCCGGCGTCAATGAACCTTTGTT 96924 29 100.0 36 ............................. ACTCCTGCAACGCTAGTAGGTAAATTGTCAACCGCT 96859 29 96.6 34 .................C........... CTGCTTTTCCCGCTGAAATATACACCCAAATCCG 96796 29 86.2 0 .................CAA......G.. | T [96772] ========== ====== ====== ====== ============================= ================================================================================================ ================== 5 29 95.9 51 GTATTAATTGTACCTAGTGGAATTGAAAC # Left flank : AGTGGAATTGAAACACTTGTATAGCTTATGTGTTTTTTCTCTATCATCCTCAGTATTAATTGTACCTAGTGGAATTGAAACATGATTTCAATGCATTATTATCCAAAAAGATCACTGTATTAATTGTACCTAGTGGAATTGAAACATGTTAAGTCTAATCTATAAAGGAACTGATGGATAGTATTAATTGTACCTAGTGGAATTGAAACGCCTAAACGATTCGCAATTTTTAGCAAGTAAAAAGTATTAATTGTACCTAGTGGAATTGAAACAAGAGTATCCGAGAGAGTATATGTCCTTCCGGAAGGTATTAATTGTACCTAGTGGAATTGAAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTAATTGTACCTAGTGGAATTGAAACGTTGAAAAAGAATTTGCAATAGTGAATAATGTTCC # Right flank : ATATTTCAATTGTTAATAATATATAAGACTTTTCTCTTATATATGGTTCAAATTACGTTTTGAATCTGCAAGGTACACATATTAATACAGTTGTAGGCCTTTATTGATTGTGGGAATATTGTTTTGTGTAATTACTAGATGAATAGTAGTTTTGGCTTTTTATTATTCTGTTATTATAGTTTGCGTAATAATGAAGATGATCCATTTTTACCACTCATAAGAAATACTTACCTGAGGTACCCATTCCCATTTCTTTCGTATGGTGTTGTATTGATACCGCACATCGGTCTTCAATTTCCAGCCTTTATTTATTTTAAGGATAATGTTGCTGCCCAAAGTAGTTGGTATCACTTCAGATGAAAGTCCCCGATATCTTCGGGCATCCAGATTTTGTTCACCATATATGCTGAGAGACCATTTTTTAGAGATGCTATAATCCATCTGAACTTCAACATGAAAATGGTCCGGATTTTCTCCAAAGTTACTTTTACTGTGCAAAG # Questionable array : NO Score: 4.18 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:-1.59, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCTAGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 2 97756-97343 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806175.1 Bacteroides sp. HMSC068A09 Scaffold625, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 97755 29 100.0 34 ............................. TATATAAGAAAAGTCAGTCCATTTTTTCATTATC 97692 29 100.0 34 ............................. TGGCTATGCATCCCGTAGGAGCCAGCCATTCCTG 97629 29 100.0 38 ............................. ACTTGTATAGCTTATGTGTTTTTTCTCTATCATCCTCA 97562 29 100.0 35 ............................. ATGATTTCAATGCATTATTATCCAAAAAGATCACT 97498 29 100.0 35 ............................. ATGTTAAGTCTAATCTATAAAGGAACTGATGGATA 97434 29 100.0 34 ............................. GCCTAAACGATTCGCAATTTTTAGCAAGTAAAAA 97371 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 7 29 100.0 35 GTATTAATTGTACCTAGTGGAATTGAAAC # Left flank : TACCTAGTGGAATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAATTGTACCTAGTGGAATTGAAACATCACATGGACAACGAACATGCCTGGACAGGAAGCGTATTAATTGTACCTAGTGGAATTGAAACACTAATGAAACATACTGGGAAGATGTGCTCTGGTGTATTAATTGTACCTAGTGGAATTGAAACATAAAAAGGATTAGTTCCCGCGCCAGTACCATTATTAGTATTAATTGTACCTAGTGGAATTGAAACTCGACTAATGCAGAGAAAGATAAATCAGACTCGAAGTATTAATTGTACCTAGTGGAATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : AAGAGTATCCGAGAGAGTATATGTCCTTCCGGAAGGTATTAATTGTACCTAGTGGAATTGAAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTAATTGTACCTAGTGGAATTGAAACGTTGAAAAAGAATTTGCAATAGTGAATAATGTTCCGTATTAATTGTACCTAGTGGAATTGAAACGTCGTTACCATCACGTTCGCCCATGTTCTCAAACTCAGTATTAATTGAGTGGAATTGAAACTTCCTTCAGCTAAGAAGAGAGACACACATATAACAGTATTAATTGTACCTAGTGGAATTGAGACTCATCTCGAAGTAGCCGGCGTCAATGAACCTTTGTTGTATTAATTGTACCTAGTGGAATTGAAACACTCCTGCAACGCTAGTAGGTAAATTGTCAACCGCTGTATTAATTGTACCTAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCTAGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 3 98077-97855 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806175.1 Bacteroides sp. HMSC068A09 Scaffold625, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 98076 29 100.0 34 ............................. ACTAATGAAACATACTGGGAAGATGTGCTCTGGT 98013 29 100.0 37 ............................. ATAAAAAGGATTAGTTCCCGCGCCAGTACCATTATTA 97947 29 100.0 35 ............................. TCGACTAATGCAGAGAAAGATAAATCAGACTCGAA 97883 29 96.6 0 ............................N | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 99.2 36 GTATTAATTGTACCTAGTGGAATTGAAAC # Left flank : TAATTGTACCTAGTGGAATTGAAACAGTGATACCGGTCGTCGGCCTGTGAAATCAAATCAGTATTAATTGTACCTAGTGGAATTGAAACACGATAGGCAATGCAGTAGCGAGATATGAGAATGGTATTAATTGTACCTAGTGGAATTGAAACACTAATGAAACATACTGGGAAGATGTGCTCTGGTGTATTAATTGTACCTAGTGGAATTGAAACATGTTATTCAATTGAATGTTGTGACCTCCTACAAAGTATTAATTGTACCTAGTGGAATTGAAACCAATATGCCATGGAGCTTTATGCGGTTGACAAGTATTAATTGTACCTAGTGGAATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAATTGTACCTAGTGGAATTGAAACATCACATGGACAACGAACATGCCTGGACAGGAAGC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATTAATTGTACCTAGTGGAATTGAAACTATATAAGAAAAGTCAGTCCATTTTTTCATTATCGTATTAATTGTACCTAGTGGAATTGAAACTGGCTATGCATCCCGTAGGAGCCAGCCATTCCTGGTATTAATTGTACCTAGTGGAATTGAAACACTTGTATAGCTTATGTGTTTTTTCTCTATCATCCTCAGTATTAATTGTACCTAGTGGAATTGAAACATGATTTCAATGCATTATTATCCAAAAAGATCACTGTATTAATTGTACCTAGTGGAATTGAAACATGTTAAGTCTAATCTATAAAGGAACTGATGGATAGTATTAATTGTACCTAGTGGAATTGAAACGCCTAAACGATTCGCAATTTTTAGCAAGTAAAAAGTATTAATTGTACCTAG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCTAGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 4 98581-98297 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806175.1 Bacteroides sp. HMSC068A09 Scaffold625, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================== ================== 98580 30 100.0 34 .............................. GTGATACCGGTCGTCGGCCTGTGAAATCAAATCA 98516 30 100.0 33 .............................. CGATAGGCAATGCAGTAGCGAGATATGAGAATG 98453 30 100.0 33 .............................. CTAATGAAACATACTGGGAAGATGTGCTCTGGT 98390 30 100.0 34 .............................. TGTTATTCAATTGAATGTTGTGACCTCCTACAAA 98326 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ================================== ================== 5 30 99.3 34 GTATTAATTGTACCTAGTGGAATTGAAACA # Left flank : CGATCTCCAGCACTTTTTGTACTTTTAGGGATCGACACTATTTTTGACCTTTAAATATCTTTTGGGGGATTGTAACTCATTCATTTTAAGTGGTCTTTGGGGGATTGATGGTAGAGTATTAATTGTACCTAGTGGAATTGAAACACCATTACGATGAACACACAGATGATGTTTATACTAGTATTAATTGTACCTAGTGGAATTGAAACACTAATGAAACATACTGGGAAGATGTGCTCTGGTGTATTAATTGTACCTAGTGGAATTGAAACAAGGTGTTTTTATAAAACTGGACTATACTCATGTTGTATTAATTGTACCTAGTGGAATTGAAACTCTATCCCTTGCGCAATGACTCCCCACGACTTTTCGGTATTAATTGTACCTAGTGGAATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : AATATGCCATGGAGCTTTATGCGGTTGACAAGTATTAATTGTACCTAGTGGAATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAATTGTACCTAGTGGAATTGAAACATCACATGGACAACGAACATGCCTGGACAGGAAGCGTATTAATTGTACCTAGTGGAATTGAAACACTAATGAAACATACTGGGAAGATGTGCTCTGGTGTATTAATTGTACCTAGTGGAATTGAAACATAAAAAGGATTAGTTCCCGCGCCAGTACCATTATTAGTATTAATTGTACCTAGTGGAATTGAAACTCGACTAATGCAGAGAAAGATAAATCAGACTCGAAGTATTAATTGTACCTAGTGGAATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCTAGTGGAATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 5 98966-98745 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806175.1 Bacteroides sp. HMSC068A09 Scaffold625, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 98965 29 100.0 36 ............................. ACCATTACGATGAACACACAGATGATGTTTATACTA 98900 29 100.0 34 ............................. ACTAATGAAACATACTGGGAAGATGTGCTCTGGT 98837 29 100.0 35 ............................. AAGGTGTTTTTATAAAACTGGACTATACTCATGTT 98773 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ==================================== ================== 4 29 100.0 35 GTATTAATTGTACCTAGTGGAATTGAAAC # Left flank : CCTTTTAAGATGTATTGGTAGAGTATGTATGTCATTTTAGTATATGATTGTGGTGAAAGAAGGGTGGCTAAAATGTTGAAACTGTGTCGTAAATATTTAAATTGGATACAGAATTCTGTTTTTGAGGGTGAAATATCTGAAGTACGCCTAAAAAAACTTCTATATTCAGCTAAAGAATTTATGGATGAATCTGAAGATAGTATTATTATTTTCAAAGGACCTAATCATAGCTCTTTGGAAAAAGAAGTAGTGGGAAAAGAACGGTGTAGTATAGATAATTTTCTGTAATTTAGTTGTCGGAGACTTTAGTAATGTTTCCTTTTTAAGGAAAATTCTTCTTAAGAGTTCTTTGACTTGTTGATTTACAGCAATATAAGTGTGGTGTCGATCTCCAGCACTTTTTGTACTTTTAGGGATCGACACTATTTTTGACCTTTAAATATCTTTTGGGGGATTGTAACTCATTCATTTTAAGTGGTCTTTGGGGGATTGATGGTAGA # Right flank : TCTATCCCTTGCGCAATGACTCCCCACGACTTTTCGGTATTAATTGTACCTAGTGGAATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATTAATTGTACCTAGTGGAATTGAAACAGTGATACCGGTCGTCGGCCTGTGAAATCAAATCAGTATTAATTGTACCTAGTGGAATTGAAACACGATAGGCAATGCAGTAGCGAGATATGAGAATGGTATTAATTGTACCTAGTGGAATTGAAACACTAATGAAACATACTGGGAAGATGTGCTCTGGTGTATTAATTGTACCTAGTGGAATTGAAACATGTTATTCAATTGAATGTTGTGACCTCCTACAAAGTATTAATTGTACCTAGTGGAATTGAAACCAATATGCCATGGAGCTTTATGCGGTTGACAAGTATTAATTGTACCTAGTGGA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCTAGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 70280-69604 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806200.1 Bacteroides sp. HMSC068A09 Scaffold798, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================================= ================== 70279 32 100.0 33 ................................ TCCTTCCCAACCGATATTGTTCAACTGGATATT 70214 32 100.0 33 ................................ CTTATTGTACGTTGGCAGATTTGCATAATGCTT 70149 32 100.0 33 ................................ TGCCTAATCGAAAGAACAGGTGGAATCCGCCTG 70084 32 84.4 89 ...........................NNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 69963 32 81.2 33 NNNNNN.......................... TAATCGTTGGTGGAATATGCAAGCTCCTTTGAC 69898 32 100.0 34 ................................ TCCTTGACATGAGAAGTGAAATGAAAAAGCGGGG 69832 32 100.0 33 ................................ TGTTAATCAAGTCGTGAGAGAATTGCCAGCTCT 69767 32 100.0 34 ................................ ATTCGCAATCTGATAATTTTCATATAGACCCACC 69701 32 100.0 34 ................................ AGATATGCAGATGCCATCGAAAAGACGGCATTCG 69635 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ========================================================================================= ================== 10 32 96.6 40 GTCACACCTCATGTAGGTGTGTGGATTGAAAC # Left flank : ATGTAGGTGTGTGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCTCATGTAGGTGTGTGGATTGAAACTGGAAAGAATCAGGAAAGAAAAAGGATACTCAATGTCACACCTCATGTAGGTGTGTGGATTGAAACTTTTGTTTTACTAATGCTTCATAGTAATCTTTGGTCACACCTCATGTAGGTGTGTGGATTGAAACATCGGAGGTATGACACAATATATTGAGTTCGATGGTCACACCTCATGTAGGTGTGTGGATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCTCATGTAGGTGTGTGGATTGAAACGCTCCTAGCCCTTTGCTGCATAGTACTATACCGA # Right flank : TTTACCATGATTCCATATCTGCTATTTCTGTTATAATGCTAGTTGACTATTGGGTGGGTAAGATTCCTAATTATTCTTTTACGCTTCTTATGGCAGAGGGAATATACAGTACTTATTCGCATATTTCTTTCATCTCCAATTTTAAGCGGATTATTTGATTTTTGTTATTATTTATAACTAGCTGTTTTTTGTTTGCTATAAAAGTAATTAAAATGATTCAGATTATCAAAGAAGATGTTTTTCAGTATGTATAGTTAAAAGAGTAGTTCTTATAATTTCTCTTCTCTTTATAATTTTCTCCCTCTCTCACCCCCTCAAACTCTTATAGATGAGAATAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGGGCGATTCAATTCGAAGGATAGCAGCGGTATCGGTAATTATCACAGCTACAGTCTG # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:0, 3:3, 4:0.83, 5:0, 6:0.25, 7:-0.50, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCTCATGTAGGTGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.50,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : NA // Array 2 72448-70822 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV806200.1 Bacteroides sp. HMSC068A09 Scaffold798, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================================== ================== 72447 32 100.0 33 ................................ ACAAGGAAATGACTTTGATTTAAACCTACAGAC 72382 32 84.4 89 ...........................NNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 72261 32 81.2 33 NNNNNN.......................... TTTATATTCAGATGTTTCTCCGACCATCTGCTC 72196 32 100.0 36 ................................ ATCTTTTTTTGTCATGTATTTTGATACATAGTTTAT 72128 32 100.0 37 ................................ GTAGAGTGAAGGTGTTTCGACACCGGAACGGCCGAGG 72059 32 84.4 90 ...........................NNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 71937 32 84.4 32 NNNNN........................... ATAAATTGGGTTATATCTGCAAACAACGAACC 71873 32 100.0 36 ................................ TTCAACGCCTCCCAATGTTTCGTTACCGCCGCCAAA 71805 32 100.0 34 ................................ GTCATAATTGATAACGGGAACCTGTACCGTGTTA 71739 32 84.4 90 ...........................NNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 71617 32 84.4 34 NNNNN........................... AGACCAAGCAAGAATCTCAGAAGGAGACTGCAAG 71551 32 100.0 33 ................................ TCTCTGATACAGAAGTATTTACTCAGGTTTTTA 71486 32 100.0 33 ................................ TAGAAAATATTGCAAAAAAACTCAAAAAATAAT 71421 32 81.2 88 ..........................NNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 71301 32 81.2 32 NNNNNN.......................... TAATATCCATTGGGATTTTCAAAGTTTTCAAA 71237 32 100.0 34 ................................ ACTGGATAGCGGAGCGCAAAAGAAACTTGATTAC 71171 32 100.0 34 ................................ ATGAAATCAGAGCGTCTTATGACGGGAATATTTA 71105 32 81.2 90 ..........................NNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 70983 32 87.5 33 NNNN............................ CGAAATATGTGATTCTGATGATCTTCGTAATGC 70918 32 100.0 33 ................................ GCGTTCTACAACTACATCAAAAGTTATCCTTCG 70853 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ========================================================================================== ================== 21 32 92.1 48 GTCACACCTCATGTAGGTGTGTGGATTGAAAC # Left flank : GATAATTATCCAGTGTTCCTAATAAAATGATTTGTAATTATGTACATTCTTATAACTTATGATGTTGATACTACGAGCAAAGAAGGGGCACGTCGTTTGAGGTGTGTGGCTAAAGCCTGTATGGATTATGGACAAAGGGTACAGAATTCAGTCTTTGAGTGTAAGGTGACAGAAGCACAATATTGTCTCTTGAAAGAACGAATCAAAAGTCTTATTGATATGTCTCTTGATAGTATTAGATTTTATGTTCTCAGTAAAAATGAAAATAATAGAGTGGAAGTGGTAGGTGTTGAGACTGCTTATAAAATAAATGATACTCTTATTATATAATGTTTGCGAATATGTAGTGTTACAAAAAAAATAGTAATTTCGCAGGTGTTAAAAATCAGTAGATTAATTTATTTATAGAGCAGTTTTGGGTTGTGAAATCGAAAAAGTAGTAACGATTCGCATAATAATTGATTAAACTTGCTGGCTGATAATATGTTATCCAGCATAGG # Right flank : TCCTAATGGCGGTAAACGGAATGCTATCGAAGGTCACACCTCATGTAGGTGTGTGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCTCATGTAGGTGTGTGGATTGAAACTGGAAAGAATCAGGAAAGAAAAAGGATACTCAATGTCACACCTCATGTAGGTGTGTGGATTGAAACTTTTGTTTTACTAATGCTTCATAGTAATCTTTGGTCACACCTCATGTAGGTGTGTGGATTGAAACATCGGAGGTATGACACAATATATTGAGTTCGATGGTCACACCTCATGTAGGTGTGTGGATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCTCATGTAGGTGTGTGG # Questionable array : NO Score: 4.77 # Score Detail : 1:0, 2:0, 3:3, 4:0.60, 5:0, 6:0.25, 7:-1.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCTCATGTAGGTGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.50,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [16-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : NA //