Array 1 5566669-5565710 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP054932.1 Actinomadura sp. NAK00032 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                                  	Insertion/Deletion
==========	======	======	======	============================	=================================================	==================
   5566668	    28	  85.7	    33	.GATC.......................	GGCTCATCATCGCTCCGTAGTGGCGTAGAGGCG                	GT,G [5566656,5566660]
   5566604	    28	 100.0	    33	............................	GCGACCCTGCTGAGCGTTGCGGCAACGCGTCGC                	
   5566543	    28	 100.0	    33	............................	GCGCGTTCCACGCCTCGACCATGCCGGGCGCGT                	
   5566482	    28	 100.0	    33	............................	TTGCGAGGATGATTCCCGCGAGCGTTACGGGAA                	
   5566421	    28	 100.0	    33	............................	GTTGAGGTGCGCGGTCTCGGCGCCGCGCTTGAG                	
   5566360	    28	  96.4	    33	..........T.................	CCCGAGCCCCGGGGCGCGGAACCGCTCTTTCCA                	
   5566299	    28	  96.4	    33	..........T.................	CTGGGCACGCGACGGCTGCATCGACCGCATCAC                	
   5566238	    28	 100.0	    33	............................	GACGCGCTGTTCGAGCTCCATCGTGAGCGCCTG                	
   5566177	    28	  92.9	    33	..................AA........	CGCGCCCGCCAGGTCCCGCACGCCGCGCAGCAG                	
   5566116	    28	 100.0	    33	............................	ACGGCCCCGTCCCCCACGACACTGGGGAGACGG                	
   5566055	    28	 100.0	    33	............................	CGCCGACCTGAACCACCTCGCCACCCACCGCCC                	
   5565994	    28	  96.4	    33	...........A................	GAGGCGACCGTGGCTAGGTCATCCGGCACTCGG                	
   5565933	    26	  89.3	    32	.......--................C..	GACGTGCTTCACCGCTGCCCGGCCACCACATG                 	
   5565875	    28	  96.4	    32	..............G.............	CAGCGCGAGCGCGTGCGCCAGTACGGCAACGC                 	
   5565815	    28	  89.3	    49	...................C.GC.....	GCCGAGATGGCAACTGGGTGTTGGTCCGCGATGGGCACTCGGACAACAG	
   5565738	    28	  71.4	     0	.G.C....AC.......C...T...G.G	|                                                	C [5565724]
==========	======	======	======	============================	=================================================	==================
        16	    28	  94.6	    34	CTCAGCCCCGCGCACGCGGGGATCGTCC	                                                 	       

# Left flank :   AGAAGCTGCTGCCGAACCATCCCCGCGCGGGGCTGAGCCTAGGTGATAGGTAGGTGTTCGCCCAGCGAACGGACGATCCCCGCGTACGCGGGGCTGAGTCGTAGTGCCGGGAGATCGGGACCTCCCGGACGGGACGATCCCCGCGTGCGCGGGGCTGAGCGTGGACACGTCCCGGACCTCACACCCAAGGATGGACGATCCCCGCGTGCGCGGGGCTGAGCGCGCGTAGGCGTTGAAGGTCACCGCCGTGACAGGACGATCCCCGCGTGCGCGGGGCTGAGACCCGGTCGCGCCCTCAGCCTGGGCGGCGAAGTGGACGATCCCCGCGTGCGCGGGGCTGAGAAGCTGAACGCGCTGCAGGTGTGGGCGAAGGCGGGACGATCCCCGCGTGCGCGGGGCTGAGGGCCATACCCTTTTGCACAGGACCACGCAGCAGGGACGATCCCCGCGTGCGCGGGGCTGAGCCAGGGGTGCGGGGGCTCGCTAAATTAGCCGGGGGA
# Right flank :  TCCACGATTCCAACTGGTACTTCGTTCCCCGCGCGTGCGTTGAGGACCGCGCCGGTCGGCTGCACTGACCACCTATCGACAAAGTTCCTTCGCTCTCGGCCCCCCGGGGGCCGAGAGCGAAGGAACTCATGGTTCACACCGGGGGCGTACCGAGGGGATATCAGTGTCGTGTGGGCGGAGAGGGGCCGCATACCAGGCCCTGGATGCGACCCTCGTGCATGCCGTGCCGGAGGCGGCTGCCGAAGGCAGCACGATCGCGCGGGTCGCCGAGCAGGCCGGGACCTCGCGCAACACGGTGTCCAAATGACGGTCCCGGTTCCTGGCCGATCGGCTGGAGGGCCTGACCGATGAGCCGAGCCTCGGCCGGCCGCGCATGATCAGCGATGCCTTGGGCACGGCGGCGTCGGTGAGCTTGAGGAACCGCAGGAACTCGCGGTGGCGATTGCCACCGGCAGTGCTGGGTGATCACCGACCTCAACGCCAGGTCCAAGGCGCCGAAC

# Questionable array : NO	 Score: 5.77
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.76,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTCAGCCCCGCGCACGCGGGGATCGTCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [3,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [16-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [33.3-28.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//